RNA–Protein interactions for RNA: ENST00000442201.6

CCDC39-201, Transcript of coiled-coil domain containing 39, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CCDC39, Length 3,279 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-201ENST00000442201 VCX2Q9H322 139 aa6.26□□□□□ -1.41
CCDC39-201ENST00000442201 ZNF702PQ9H963 129 aa6.26□□□□□ -1.41
CCDC39-201ENST00000442201 SIGLEC8Q9NYZ4 499 aa6.26□□□□□ -1.41
CCDC39-201ENST00000442201 HIGD1AQ9Y241 93 aa6.26□□□□□ -1.41
CCDC39-201ENST00000442201 DNAJC9-AS1A6NH13 148 aa6.26□□□□□ -1.41
CCDC39-201ENST00000442201 SNAI2O43623 268 aa6.26□□□□□ -1.41
CCDC39-201ENST00000442201 IL4P05112 153 aa6.26□□□□□ -1.41
CCDC39-201ENST00000442201 LCN12Q6JVE5 192 aa6.26□□□□□ -1.41
CCDC39-201ENST00000442201 CLEC19AQ6UXS0 136 aa6.26□□□□□ -1.41
CCDC39-201ENST00000442201 C2orf91Q6ZV80 131 aa6.26□□□□□ -1.41
CCDC39-201ENST00000442201 ZNF329Q86UD4 541 aa6.26□□□□□ -1.41
CCDC39-201ENST00000442201 ZNF491Q8N8L2 437 aa6.26□□□□□ -1.41
CCDC39-201ENST00000442201 RNF125Q96EQ8 232 aa6.26□□□□□ -1.41
CCDC39-201ENST00000442201 CCDC140Q96MF4 163 aa6.26□□□□□ -1.41
CCDC39-201ENST00000442201 PMCHL2Q9BQD1 86 aa6.26□□□□□ -1.41
CCDC39-201ENST00000442201 A0A0G2JLM5 398 aa6.25□□□□□ -1.41
CCDC39-201ENST00000442201 MORN5Q5VZ52 161 aa6.25□□□□□ -1.41
CCDC39-201ENST00000442201 KLK15Q9H2R5 256 aa6.25□□□□□ -1.41
CCDC39-201ENST00000442201 TMEM167BQ9NRX6 74 aa6.25□□□□□ -1.41
CCDC39-201ENST00000442201 HIVEP2P31629 2446 aa6.25□□□□□ -1.41
CCDC39-201ENST00000442201 TRAV5A0A0B4J249 113 aa6.25□□□□□ -1.41
CCDC39-201ENST00000442201 TMEM89A2RUT3 159 aa6.25□□□□□ -1.41
CCDC39-201ENST00000442201 FAM181BA6NEQ2 426 aa6.25□□□□□ -1.41
CCDC39-201ENST00000442201 PAGE4O60829 102 aa6.25□□□□□ -1.41
CCDC39-201ENST00000442201 SLC35B1P78383 322 aa6.25□□□□□ -1.41
CCDC39-201ENST00000442201 EBLN2Q6P2I7 272 aa6.25□□□□□ -1.41
CCDC39-201ENST00000442201 FAM167A-AS1Q96KT0 104 aa6.25□□□□□ -1.41
CCDC39-201ENST00000442201 MS4A6AQ9H2W1 248 aa6.25□□□□□ -1.41
CCDC39-201ENST00000442201 SPANXA1Q9NS26 97 aa6.25□□□□□ -1.41
CCDC39-201ENST00000442201 SERTAD4Q9NUC0 356 aa6.25□□□□□ -1.41
CCDC39-201ENST00000442201 OTOGQ6ZRI0 2925 aa6.25□□□□□ -1.41
CCDC39-201ENST00000442201 WI2-2373I1.2A0A1W2PRP0 233 aa6.24□□□□□ -1.41
CCDC39-201ENST00000442201 PMCHP20382 165 aa6.24□□□□□ -1.41
CCDC39-201ENST00000442201 Q8N2B8 174 aa6.24□□□□□ -1.41
CCDC39-201ENST00000442201 OR4F5Q8NH21 305 aa6.24□□□□□ -1.41
CCDC39-201ENST00000442201 PTH2Q96A98 100 aa6.24□□□□□ -1.41
CCDC39-201ENST00000442201 IL36BQ9NZH7 164 aa6.24□□□□□ -1.41
CCDC39-201ENST00000442201 TP73-AS1Q9UF72 201 aa6.24□□□□□ -1.41
CCDC39-201ENST00000442201 NPPCP23582 126 aa6.24□□□□□ -1.41
CCDC39-201ENST00000442201 UBE2G1P62253 170 aa6.24□□□□□ -1.41
CCDC39-201ENST00000442201 UBE2L3P68036 154 aaKnown RBP6.24□□□□□ -1.41
CCDC39-201ENST00000442201 ZNF503Q96F45 646 aa6.24□□□□□ -1.41
CCDC39-201ENST00000442201 SPAG8Q99932 426 aaPredicted RBP6.24□□□□□ -1.41
CCDC39-201ENST00000442201 SLC25A2Q9BXI2 301 aa6.24□□□□□ -1.41
CCDC39-201ENST00000442201 SLC25A39Q9BZJ4 359 aaPredicted RBP6.24□□□□□ -1.41
CCDC39-201ENST00000442201 CYSLTR1Q9Y271 337 aa6.24□□□□□ -1.41
CCDC39-201ENST00000442201 SPCS1Q9Y6A9 102 aa6.24□□□□□ -1.41
CCDC39-201ENST00000442201 ZNF469Q96JG9 3925 aaPredicted RBP6.24□□□□□ -1.41
CCDC39-201ENST00000442201 B5MCH6 92 aa6.24□□□□□ -1.41
CCDC39-201ENST00000442201 PSMB8P28062 276 aa6.24□□□□□ -1.41
CCDC39-201ENST00000442201 RPL24P83731 157 aaKnown RBP6.24□□□□□ -1.41
CCDC39-201ENST00000442201 TXNDC17Q9BRA2 123 aa6.24□□□□□ -1.41
CCDC39-201ENST00000442201 PAXXQ9BUH6 204 aa6.24□□□□□ -1.41
CCDC39-201ENST00000442201 ESM1Q9NQ30 184 aa6.24□□□□□ -1.41
CCDC39-201ENST00000442201 IGHV3-35A0A0C4DH35 117 aa6.23□□□□□ -1.41
CCDC39-201ENST00000442201 C11orf94C9JXX5 98 aa6.23□□□□□ -1.41
CCDC39-201ENST00000442201 F8W1H4 67 aa6.23□□□□□ -1.41
CCDC39-201ENST00000442201 H3BUT2 72 aa6.23□□□□□ -1.41
CCDC39-201ENST00000442201 M0QXV9 152 aa6.23□□□□□ -1.41
CCDC39-201ENST00000442201 IGHV3-11P01762 117 aa6.23□□□□□ -1.41
CCDC39-201ENST00000442201 TMEM97Q5BJF2 176 aa6.23□□□□□ -1.41
CCDC39-201ENST00000442201 AP1S3Q96PC3 154 aa6.23□□□□□ -1.41
CCDC39-201ENST00000442201 SHANK2-AS3Q9BTD1 123 aa6.23□□□□□ -1.41
CCDC39-201ENST00000442201 CDIP1Q9H305 208 aa6.23□□□□□ -1.41
CCDC39-201ENST00000442201 BMPR1BO00238 502 aa6.23□□□□□ -1.41
CCDC39-201ENST00000442201 ELANEP08246 267 aa6.23□□□□□ -1.41
CCDC39-201ENST00000442201 ADAMTSL5Q6ZMM2 481 aa6.23□□□□□ -1.41
CCDC39-201ENST00000442201 NAT8BQ9UHF3 227 aa6.23□□□□□ -1.41
CCDC39-201ENST00000442201 ARL2-SNX15V9GYD0 113 aa6.23□□□□□ -1.41
CCDC39-201ENST00000442201 AKAP9Q99996 3911 aa6.23□□□□□ -1.41
CCDC39-201ENST00000442201 MTORP42345 2549 aa6.23□□□□□ -1.41
CCDC39-201ENST00000442201 HELTA6NFD8 242 aa6.23□□□□□ -1.41
CCDC39-201ENST00000442201 H3BRN7 92 aa6.23□□□□□ -1.41
CCDC39-201ENST00000442201 NHLRC4P0CG21 123 aaPredicted RBP6.23□□□□□ -1.41
CCDC39-201ENST00000442201 PYYP10082 97 aa6.23□□□□□ -1.41
CCDC39-201ENST00000442201 FOXE3Q13461 319 aa6.23□□□□□ -1.41
CCDC39-201ENST00000442201 TM2D2Q9BX73 214 aa6.23□□□□□ -1.41
CCDC39-201ENST00000442201 RABAC1Q9UI14 185 aa6.23□□□□□ -1.41
CCDC39-201ENST00000442201 TMEM213A2RRL7 107 aa6.22□□□□□ -1.41
CCDC39-201ENST00000442201 ATP5G3P48201 142 aa6.22□□□□□ -1.41
CCDC39-201ENST00000442201 C10orf99Q6UWK7 81 aa6.22□□□□□ -1.41
CCDC39-201ENST00000442201 OR4X2Q8NGF9 303 aa6.22□□□□□ -1.41
CCDC39-201ENST00000442201 C1QTNF4Q9BXJ3 329 aa6.22□□□□□ -1.41
CCDC39-201ENST00000442201 CSDC2Q9Y534 153 aaKnown RBP6.22□□□□□ -1.41
CCDC39-201ENST00000442201 YTHDF2Q9Y5A9 579 aaKnown RBP6.22□□□□□ -1.41
CCDC39-201ENST00000442201 A0A087X0K7 114 aa6.22□□□□□ -1.41
CCDC39-201ENST00000442201 OR4C46A6NHA9 309 aa6.22□□□□□ -1.41
CCDC39-201ENST00000442201 SNURFLB1AK76 121 aa6.22□□□□□ -1.41
CCDC39-201ENST00000442201 RNASE1P07998 156 aaKnown RBP6.22□□□□□ -1.41
CCDC39-201ENST00000442201 HILS1P60008 231 aa6.22□□□□□ -1.41
CCDC39-201ENST00000442201 TMEM136Q6ZRR5 245 aa6.22□□□□□ -1.41
CCDC39-201ENST00000442201 Q6ZSV7 163 aa6.22□□□□□ -1.41
CCDC39-201ENST00000442201 Q71RC1 249 aaPredicted RBP6.22□□□□□ -1.41
CCDC39-201ENST00000442201 BPIFA4PQ86YQ2 179 aa6.22□□□□□ -1.41
CCDC39-201ENST00000442201 FXYD5Q96DB9 178 aa6.22□□□□□ -1.41
CCDC39-201ENST00000442201 A0A1W2PRE2 83 aa6.21□□□□□ -1.41
CCDC39-201ENST00000442201 COX8AP10176 69 aa6.21□□□□□ -1.41
CCDC39-201ENST00000442201 GP9P14770 177 aa6.21□□□□□ -1.41
CCDC39-201ENST00000442201 KLF5Q13887 457 aaPredicted RBP6.21□□□□□ -1.41
CCDC39-201ENST00000442201 ANAPC13Q9BS18 74 aa6.21□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms