RNA–Protein interactions for RNA: ENST00000440514.1

CPSF4-205, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 3

Gene CPSF4, Length 578 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-205ENST00000440514 Q6ZQT7 251 aa12.86□□□□□ -0.35
CPSF4-205ENST00000440514 CCDC28AQ8IWP9 274 aa12.86□□□□□ -0.35
CPSF4-205ENST00000440514 RNASE8Q8TDE3 154 aaKnown RBP12.86□□□□□ -0.35
CPSF4-205ENST00000440514 TMEM263Q8WUH6 116 aaKnown RBP12.86□□□□□ -0.35
CPSF4-205ENST00000440514 SFT2D1Q8WV19 159 aa12.86□□□□□ -0.35
CPSF4-205ENST00000440514 NDFIP1Q9BT67 221 aa12.86□□□□□ -0.35
CPSF4-205ENST00000440514 TRAV10A0A0B4J240 114 aa12.85□□□□□ -0.35
CPSF4-205ENST00000440514 C11orf94C9JXX5 98 aa12.85□□□□□ -0.35
CPSF4-205ENST00000440514 ZNF324O75467 553 aaPredicted RBP12.85□□□□□ -0.35
CPSF4-205ENST00000440514 TCRAP04437 139 aa12.85□□□□□ -0.35
CPSF4-205ENST00000440514 ZNF493Q6ZR52 646 aa12.85□□□□□ -0.35
CPSF4-205ENST00000440514 C9orf62Q8N4C0 152 aa12.85□□□□□ -0.35
CPSF4-205ENST00000440514 HIST1H2BAQ96A08 127 aa12.85□□□□□ -0.35
CPSF4-205ENST00000440514 SGK494Q96LW2 274 aa12.85□□□□□ -0.35
CPSF4-205ENST00000440514 PYGO2Q9BRQ0 406 aa12.85□□□□□ -0.35
CPSF4-205ENST00000440514 A0A1B0GV50 99 aa12.84□□□□□ -0.35
CPSF4-205ENST00000440514 C2CD4CQ8TF44 421 aa12.84□□□□□ -0.35
CPSF4-205ENST00000440514 DEFB131BA0A096LNP1 70 aa12.83□□□□□ -0.36
CPSF4-205ENST00000440514 LYRM9A8MSI8 78 aa12.83□□□□□ -0.36
CPSF4-205ENST00000440514 IFNA7P01567 189 aa12.83□□□□□ -0.36
CPSF4-205ENST00000440514 SULT1A2P50226 295 aa12.83□□□□□ -0.36
CPSF4-205ENST00000440514 DAD1P61803 113 aa12.83□□□□□ -0.36
CPSF4-205ENST00000440514 ATG101Q9BSB4 218 aa12.83□□□□□ -0.36
CPSF4-205ENST00000440514 EPDR1Q9UM22 224 aa12.83□□□□□ -0.36
CPSF4-205ENST00000440514 PLECQ15149 4684 aaKnown RBP12.83□□□□□ -0.36
CPSF4-205ENST00000440514 TRAV1-1A0A0B4J248 108 aa12.82□□□□□ -0.36
CPSF4-205ENST00000440514 FAM74A7A6NL05 159 aa12.82□□□□□ -0.36
CPSF4-205ENST00000440514 CYB561D1Q8N8Q1 229 aa12.82□□□□□ -0.36
CPSF4-205ENST00000440514 TVP23CQ96ET8 276 aa12.82□□□□□ -0.36
CPSF4-205ENST00000440514 TXNDC17Q9BRA2 123 aa12.82□□□□□ -0.36
CPSF4-205ENST00000440514 LYSTQ99698 3801 aa12.82□□□□□ -0.36
CPSF4-205ENST00000440514 CBY3A6NI87 242 aa12.81□□□□□ -0.36
CPSF4-205ENST00000440514 IGLL5B9A064 214 aa12.81□□□□□ -0.36
CPSF4-205ENST00000440514 DEFB130BP0DP73 79 aa12.81□□□□□ -0.36
CPSF4-205ENST00000440514 DEFB130AP0DP74 79 aa12.81□□□□□ -0.36
CPSF4-205ENST00000440514 HTN3P15516 51 aa12.81□□□□□ -0.36
CPSF4-205ENST00000440514 TAGLN2P37802 199 aaKnown RBP12.81□□□□□ -0.36
CPSF4-205ENST00000440514 SAPCD1Q5SSQ6 148 aa12.81□□□□□ -0.36
CPSF4-205ENST00000440514 LINC00467Q9BRT7 94 aa12.81□□□□□ -0.36
CPSF4-205ENST00000440514 NOP10Q9NPE3 64 aaKnown RBP12.81□□□□□ -0.36
CPSF4-205ENST00000440514 TIMM8BQ9Y5J9 83 aaPredicted RBP12.81□□□□□ -0.36
CPSF4-205ENST00000440514 RYR3Q15413 4870 aa12.81□□□□□ -0.36
CPSF4-205ENST00000440514 RYR2Q92736 4967 aa12.81□□□□□ -0.36
CPSF4-205ENST00000440514 SACSQ9NZJ4 4579 aa12.8□□□□□ -0.36
CPSF4-205ENST00000440514 RGS13O14921 159 aa12.8□□□□□ -0.36
CPSF4-205ENST00000440514 MUC21Q5SSG8 566 aa12.8□□□□□ -0.36
CPSF4-205ENST00000440514 EIF4E3Q8N5X7 224 aaKnown RBP12.8□□□□□ -0.36
CPSF4-205ENST00000440514 TMEM75Q8N9X5 138 aa12.8□□□□□ -0.36
CPSF4-205ENST00000440514 TREM1Q9NP99 234 aa12.8□□□□□ -0.36
CPSF4-205ENST00000440514 MANBALQ9NQG1 85 aa12.8□□□□□ -0.36
CPSF4-205ENST00000440514 TP53TG3Q9ULZ0 132 aa12.8□□□□□ -0.36
CPSF4-205ENST00000440514 IGHV4-4A0A075B6R2 117 aa12.79□□□□□ -0.36
CPSF4-205ENST00000440514 IGHV1OR15-1A0A075B7D0 117 aa12.79□□□□□ -0.36
CPSF4-205ENST00000440514 SNURFLB1AK76 121 aa12.79□□□□□ -0.36
CPSF4-205ENST00000440514 IFNA1P01562 189 aa12.79□□□□□ -0.36
CPSF4-205ENST00000440514 IGLV2-11P01706 119 aa12.79□□□□□ -0.36
CPSF4-205ENST00000440514 S100A9P06702 114 aaKnown RBP12.79□□□□□ -0.36
CPSF4-205ENST00000440514 CST9LP1Q5W188 147 aa12.79□□□□□ -0.36
CPSF4-205ENST00000440514 Q6AWC8 147 aa12.79□□□□□ -0.36
CPSF4-205ENST00000440514 C11orf72Q8NBR9 251 aa12.79□□□□□ -0.36
CPSF4-205ENST00000440514 ZNF680Q8NEM1 530 aa12.79□□□□□ -0.36
CPSF4-205ENST00000440514 LINC00476Q8WZB0 136 aa12.79□□□□□ -0.36
CPSF4-205ENST00000440514 GSN-AS1Q9NRJ2 163 aa12.79□□□□□ -0.36
CPSF4-205ENST00000440514 PSG8Q9UQ74 426 aa12.79□□□□□ -0.36
CPSF4-205ENST00000440514 DNAH1Q9P2D7 4330 aa12.79□□□□□ -0.36
CPSF4-205ENST00000440514 TRAV34A0A0B4J273 112 aa12.78□□□□□ -0.36
CPSF4-205ENST00000440514 PEX7O00628 323 aa12.78□□□□□ -0.36
CPSF4-205ENST00000440514 ATP5G3P48201 142 aa12.78□□□□□ -0.36
CPSF4-205ENST00000440514 NKX2-5P52952 324 aaPredicted RBP12.78□□□□□ -0.36
CPSF4-205ENST00000440514 BLOC1S1P78537 153 aa12.78□□□□□ -0.36
CPSF4-205ENST00000440514 FLI1Q01543 452 aaPredicted RBP12.78□□□□□ -0.36
CPSF4-205ENST00000440514 ANXA2RQ3ZCQ2 193 aa12.78□□□□□ -0.36
CPSF4-205ENST00000440514 PRNTQ86SH4 94 aa12.78□□□□□ -0.36
CPSF4-205ENST00000440514 LINC00479Q96M42 142 aa12.78□□□□□ -0.36
CPSF4-205ENST00000440514 C8orf49Q96NF6 230 aa12.78□□□□□ -0.36
CPSF4-205ENST00000440514 APLNQ9ULZ1 77 aa12.78□□□□□ -0.36
CPSF4-205ENST00000440514 PAGE4O60829 102 aa12.77□□□□□ -0.37
CPSF4-205ENST00000440514 NAGKQ9UJ70 344 aa12.77□□□□□ -0.37
CPSF4-205ENST00000440514 TRAV21A0A0B4J279 112 aa12.76□□□□□ -0.37
CPSF4-205ENST00000440514 TCTAP57738 103 aa12.76□□□□□ -0.37
CPSF4-205ENST00000440514 Q86TA4 180 aa12.76□□□□□ -0.37
CPSF4-205ENST00000440514 FMC1Q96HJ9 113 aa12.76□□□□□ -0.37
CPSF4-205ENST00000440514 KLF12Q9Y4X4 402 aa12.76□□□□□ -0.37
CPSF4-205ENST00000440514 GAGE12BA1L429 117 aa12.75□□□□□ -0.37
CPSF4-205ENST00000440514 GAGE7O76087 117 aa12.75□□□□□ -0.37
CPSF4-205ENST00000440514 LY6G6CO95867 125 aa12.75□□□□□ -0.37
CPSF4-205ENST00000440514 GAGE12FP0CL80 117 aa12.75□□□□□ -0.37
CPSF4-205ENST00000440514 GAGE12GP0CL81 117 aa12.75□□□□□ -0.37
CPSF4-205ENST00000440514 GAGE12IP0CL82 117 aa12.75□□□□□ -0.37
CPSF4-205ENST00000440514 ZNF80P51504 273 aaPredicted RBP12.75□□□□□ -0.37
CPSF4-205ENST00000440514 UBE2G1P62253 170 aa12.75□□□□□ -0.37
CPSF4-205ENST00000440514 FAM159AQ6UWV7 190 aa12.75□□□□□ -0.37
CPSF4-205ENST00000440514 Q6ZTI0 123 aa12.75□□□□□ -0.37
CPSF4-205ENST00000440514 LINC00612Q8N6U2 182 aa12.75□□□□□ -0.37
CPSF4-205ENST00000440514 KCNS1Q96KK3 526 aa12.75□□□□□ -0.37
CPSF4-205ENST00000440514 ZFP30Q9Y2G7 519 aa12.75□□□□□ -0.37
CPSF4-205ENST00000440514 TCL1AP56279 114 aa12.74□□□□□ -0.37
CPSF4-205ENST00000440514 CCL20P78556 96 aa12.74□□□□□ -0.37
CPSF4-205ENST00000440514 DAZ2Q13117 558 aaKnown RBP12.74□□□□□ -0.37
CPSF4-205ENST00000440514 SMUG1Q53HV7 270 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 408.3 ms