RNA–Protein interactions for RNA: ENST00000439514.1

HLA-W-207, Transcript of major histocompatibility complex, class I, W (pseudogene), humanhuman

BASIC

Gene HLA-W, Length 771 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-W-207ENST00000439514 ZNF415Q09FC8 603 aa9.29□□□□□ -0.92
HLA-W-207ENST00000439514 LGALS9BQ3B8N2 356 aa9.29□□□□□ -0.92
HLA-W-207ENST00000439514 RNF212Q495C1 297 aa9.29□□□□□ -0.92
HLA-W-207ENST00000439514 Q6AWC8 147 aa9.29□□□□□ -0.92
HLA-W-207ENST00000439514 GOLT1AQ6ZVE7 132 aa9.29□□□□□ -0.92
HLA-W-207ENST00000439514 POM121L12Q8N7R1 296 aa9.29□□□□□ -0.92
HLA-W-207ENST00000439514 Q8TAT8 98 aa9.29□□□□□ -0.92
HLA-W-207ENST00000439514 RPH3ALQ9UNE2 315 aa9.29□□□□□ -0.92
HLA-W-207ENST00000439514 TRGV11A0A075B6L2 103 aa9.28□□□□□ -0.92
HLA-W-207ENST00000439514 TRAV21A0A0B4J279 112 aa9.28□□□□□ -0.92
HLA-W-207ENST00000439514 PPT1P50897 306 aa9.28□□□□□ -0.92
HLA-W-207ENST00000439514 TMEM88Q6PEY1 159 aa9.28□□□□□ -0.92
HLA-W-207ENST00000439514 FAM159AQ6UWV7 190 aa9.28□□□□□ -0.92
HLA-W-207ENST00000439514 UBE2DNLQ8IWF7 75 aa9.28□□□□□ -0.92
HLA-W-207ENST00000439514 IQCF2Q8IXL9 164 aa9.28□□□□□ -0.92
HLA-W-207ENST00000439514 TCEAL7Q9BRU2 100 aa9.28□□□□□ -0.92
HLA-W-207ENST00000439514 PLA2G2EQ9NZK7 142 aa9.28□□□□□ -0.92
HLA-W-207ENST00000439514 TRGV2A0A075B6R0 118 aa9.27□□□□□ -0.93
HLA-W-207ENST00000439514 H3BNG1 76 aa9.27□□□□□ -0.93
HLA-W-207ENST00000439514 TCRAP04437 139 aa9.27□□□□□ -0.93
HLA-W-207ENST00000439514 SEC11BP0C7V7 166 aa9.27□□□□□ -0.93
HLA-W-207ENST00000439514 ZFP69Q49AA0 526 aa9.27□□□□□ -0.93
HLA-W-207ENST00000439514 SAPCD1Q5SSQ6 148 aa9.27□□□□□ -0.93
HLA-W-207ENST00000439514 DPPA3Q6W0C5 159 aa9.27□□□□□ -0.93
HLA-W-207ENST00000439514 CYB561D1Q8N8Q1 229 aa9.27□□□□□ -0.93
HLA-W-207ENST00000439514 C11orf72Q8NBR9 251 aa9.27□□□□□ -0.93
HLA-W-207ENST00000439514 KCNS1Q96KK3 526 aa9.27□□□□□ -0.93
HLA-W-207ENST00000439514 ATG101Q9BSB4 218 aa9.27□□□□□ -0.93
HLA-W-207ENST00000439514 TREM1Q9NP99 234 aa9.27□□□□□ -0.93
HLA-W-207ENST00000439514 CYTL1Q9NRR1 136 aa9.27□□□□□ -0.93
HLA-W-207ENST00000439514 ARL2-SNX15V9GYD0 113 aa9.27□□□□□ -0.93
HLA-W-207ENST00000439514 RYR3Q15413 4870 aa9.26□□□□□ -0.93
HLA-W-207ENST00000439514 GAGE12BA1L429 117 aa9.26□□□□□ -0.93
HLA-W-207ENST00000439514 F6UZH7 168 aa9.26□□□□□ -0.93
HLA-W-207ENST00000439514 BCL2L11O43521 198 aa9.26□□□□□ -0.93
HLA-W-207ENST00000439514 PFDN1O60925 122 aa9.26□□□□□ -0.93
HLA-W-207ENST00000439514 EIF3GO75821 320 aaKnown RBP eCLIP9.26□□□□□ -0.93
HLA-W-207ENST00000439514 GAGE7O76087 117 aa9.26□□□□□ -0.93
HLA-W-207ENST00000439514 GAGE12FP0CL80 117 aa9.26□□□□□ -0.93
HLA-W-207ENST00000439514 GAGE12GP0CL81 117 aa9.26□□□□□ -0.93
HLA-W-207ENST00000439514 GAGE12IP0CL82 117 aa9.26□□□□□ -0.93
HLA-W-207ENST00000439514 SUMO1P63165 101 aaKnown RBP9.26□□□□□ -0.93
HLA-W-207ENST00000439514 TDRG1Q3Y452 100 aa9.26□□□□□ -0.93
HLA-W-207ENST00000439514 EIF5AL1Q6IS14 154 aaKnown RBP9.26□□□□□ -0.93
HLA-W-207ENST00000439514 TMEM75Q8N9X5 138 aa9.26□□□□□ -0.93
HLA-W-207ENST00000439514 HIST1H2BAQ96A08 127 aa9.26□□□□□ -0.93
HLA-W-207ENST00000439514 SPXQ9BT56 116 aa9.26□□□□□ -0.93
HLA-W-207ENST00000439514 ZNF471Q9BX82 626 aaPredicted RBP9.26□□□□□ -0.93
HLA-W-207ENST00000439514 GSN-AS1Q9NRJ2 163 aa9.26□□□□□ -0.93
HLA-W-207ENST00000439514 TP53TG3Q9ULZ0 132 aa9.26□□□□□ -0.93
HLA-W-207ENST00000439514 EPDR1Q9UM22 224 aa9.26□□□□□ -0.93
HLA-W-207ENST00000439514 SACSQ9NZJ4 4579 aa9.26□□□□□ -0.93
HLA-W-207ENST00000439514 TRGV1A0A0A0MS02 117 aa9.25□□□□□ -0.93
HLA-W-207ENST00000439514 MAP1LC3B2A6NCE7 125 aa9.25□□□□□ -0.93
HLA-W-207ENST00000439514 SPINK4O60575 86 aa9.25□□□□□ -0.93
HLA-W-207ENST00000439514 SLAQ13239 276 aa9.25□□□□□ -0.93
HLA-W-207ENST00000439514 PRR9Q5T870 116 aa9.25□□□□□ -0.93
HLA-W-207ENST00000439514 MAP1LC3BQ9GZQ8 125 aa9.25□□□□□ -0.93
HLA-W-207ENST00000439514 KLF12Q9Y4X4 402 aa9.25□□□□□ -0.93
HLA-W-207ENST00000439514 DNAH1Q9P2D7 4330 aa9.24□□□□□ -0.93
HLA-W-207ENST00000439514 RYR2Q92736 4967 aa9.24□□□□□ -0.93
HLA-W-207ENST00000439514 GGTLC3B5MD39 225 aa9.24□□□□□ -0.93
HLA-W-207ENST00000439514 SMLR1H3BR10 107 aa9.24□□□□□ -0.93
HLA-W-207ENST00000439514 IFNA7P01567 189 aa9.24□□□□□ -0.93
HLA-W-207ENST00000439514 TPT1P13693 172 aaKnown RBP9.24□□□□□ -0.93
HLA-W-207ENST00000439514 FHITP49789 147 aa9.24□□□□□ -0.93
HLA-W-207ENST00000439514 CCL18P55774 89 aa9.24□□□□□ -0.93
HLA-W-207ENST00000439514 FLI1Q01543 452 aaPredicted RBP9.24□□□□□ -0.93
HLA-W-207ENST00000439514 ZNF726P1Q15940 193 aa9.24□□□□□ -0.93
HLA-W-207ENST00000439514 TCTE3Q8IZS6 198 aa9.24□□□□□ -0.93
HLA-W-207ENST00000439514 SDF2L1Q9HCN8 221 aa9.24□□□□□ -0.93
HLA-W-207ENST00000439514 GNG5P63218 68 aa9.23□□□□□ -0.93
HLA-W-207ENST00000439514 OR5I1Q13606 314 aa9.23□□□□□ -0.93
HLA-W-207ENST00000439514 LGALSLQ3ZCW2 172 aaPredicted RBP9.23□□□□□ -0.93
HLA-W-207ENST00000439514 SMUG1Q53HV7 270 aa9.23□□□□□ -0.93
HLA-W-207ENST00000439514 Q6ZTI0 123 aa9.23□□□□□ -0.93
HLA-W-207ENST00000439514 PSG8Q9UQ74 426 aa9.23□□□□□ -0.93
HLA-W-207ENST00000439514 PLECQ15149 4684 aaKnown RBP9.22□□□□□ -0.93
HLA-W-207ENST00000439514 TRAV8-1A0A0A6YYK1 113 aa9.22□□□□□ -0.93
HLA-W-207ENST00000439514 TEX46H3BTG2 121 aa9.22□□□□□ -0.93
HLA-W-207ENST00000439514 NUDT3O95989 172 aa9.22□□□□□ -0.93
HLA-W-207ENST00000439514 RAB5CP51148 216 aa9.22□□□□□ -0.93
HLA-W-207ENST00000439514 TMEM183BQ1AE95 376 aa9.22□□□□□ -0.93
HLA-W-207ENST00000439514 MUC21Q5SSG8 566 aa9.22□□□□□ -0.93
HLA-W-207ENST00000439514 TMUB2Q71RG4 321 aa9.22□□□□□ -0.93
HLA-W-207ENST00000439514 SSX7Q7RTT5 188 aa9.22□□□□□ -0.93
HLA-W-207ENST00000439514 TMEM183AQ8IXX5 376 aa9.22□□□□□ -0.93
HLA-W-207ENST00000439514 OR11H4Q8NGC9 324 aa9.22□□□□□ -0.93
HLA-W-207ENST00000439514 NAGKQ9UJ70 344 aa9.22□□□□□ -0.93
HLA-W-207ENST00000439514 TRAV26-1A0A087WT03 109 aa9.21□□□□□ -0.94
HLA-W-207ENST00000439514 FAM74A7A6NL05 159 aa9.21□□□□□ -0.94
HLA-W-207ENST00000439514 PEX7O00628 323 aa9.21□□□□□ -0.94
HLA-W-207ENST00000439514 PFN1P07737 140 aaKnown RBP9.21□□□□□ -0.94
HLA-W-207ENST00000439514 MBD3L1Q8WWY6 194 aa9.21□□□□□ -0.94
HLA-W-207ENST00000439514 RASL10AQ92737 203 aa9.21□□□□□ -0.94
HLA-W-207ENST00000439514 TMPRSS5Q9H3S3 457 aa9.21□□□□□ -0.94
HLA-W-207ENST00000439514 ZFP30Q9Y2G7 519 aa9.21□□□□□ -0.94
HLA-W-207ENST00000439514 CIDEAO60543 219 aa9.2□□□□□ -0.94
HLA-W-207ENST00000439514 S100A9P06702 114 aaKnown RBP9.2□□□□□ -0.94
HLA-W-207ENST00000439514 FGF8P55075 233 aaPredicted RBP9.2□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms