RNA–Protein interactions for RNA: ENST00000439487.5

SEMA3B-206, Transcript of semaphorin 3B, humanhuman

TSL 3

Gene SEMA3B, Length 594 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-206ENST00000439487 IFNA7P01567 189 aa13.91□□□□□ -0.18
SEMA3B-206ENST00000439487 SULT1A2P50226 295 aa13.91□□□□□ -0.18
SEMA3B-206ENST00000439487 RAB5CP51148 216 aa13.91□□□□□ -0.18
SEMA3B-206ENST00000439487 TVP23CQ96ET8 276 aa13.91□□□□□ -0.18
SEMA3B-206ENST00000439487 PYGO2Q9BRQ0 406 aa13.91□□□□□ -0.18
SEMA3B-206ENST00000439487 K7EQM0 130 aa13.9□□□□□ -0.18
SEMA3B-206ENST00000439487 CST9LP1Q5W188 147 aa13.9□□□□□ -0.18
SEMA3B-206ENST00000439487 CCDC28AQ8IWP9 274 aa13.9□□□□□ -0.18
SEMA3B-206ENST00000439487 CYB561D1Q8N8Q1 229 aa13.9□□□□□ -0.18
SEMA3B-206ENST00000439487 C16orf74Q96GX8 76 aa13.9□□□□□ -0.18
SEMA3B-206ENST00000439487 ATG101Q9BSB4 218 aa13.9□□□□□ -0.18
SEMA3B-206ENST00000439487 NKX6-2Q9C056 277 aaPredicted RBP13.9□□□□□ -0.18
SEMA3B-206ENST00000439487 PSG8Q9UQ74 426 aa13.9□□□□□ -0.18
SEMA3B-206ENST00000439487 BOLA1Q9Y3E2 137 aa13.9□□□□□ -0.18
SEMA3B-206ENST00000439487 PAGE4O60829 102 aa13.89□□□□□ -0.19
SEMA3B-206ENST00000439487 ZNF493Q6ZR52 646 aa13.89□□□□□ -0.19
SEMA3B-206ENST00000439487 RNASE8Q8TDE3 154 aaKnown RBP13.89□□□□□ -0.19
SEMA3B-206ENST00000439487 TMEM263Q8WUH6 116 aaKnown RBP13.89□□□□□ -0.19
SEMA3B-206ENST00000439487 TREM1Q9NP99 234 aa13.89□□□□□ -0.19
SEMA3B-206ENST00000439487 SACSQ9NZJ4 4579 aa13.88□□□□□ -0.19
SEMA3B-206ENST00000439487 TRAV34A0A0B4J273 112 aa13.88□□□□□ -0.19
SEMA3B-206ENST00000439487 TEX48A0A1B0GUV7 120 aa13.88□□□□□ -0.19
SEMA3B-206ENST00000439487 F6UZH7 168 aa13.88□□□□□ -0.19
SEMA3B-206ENST00000439487 PEX7O00628 323 aa13.88□□□□□ -0.19
SEMA3B-206ENST00000439487 IGLV2-11P01706 119 aa13.88□□□□□ -0.19
SEMA3B-206ENST00000439487 ATP5G3P48201 142 aa13.88□□□□□ -0.19
SEMA3B-206ENST00000439487 LINC00479Q96M42 142 aa13.88□□□□□ -0.19
SEMA3B-206ENST00000439487 RGS13O14921 159 aa13.87□□□□□ -0.19
SEMA3B-206ENST00000439487 CCL20P78556 96 aa13.87□□□□□ -0.19
SEMA3B-206ENST00000439487 FLI1Q01543 452 aaPredicted RBP13.87□□□□□ -0.19
SEMA3B-206ENST00000439487 PRNTQ86SH4 94 aa13.87□□□□□ -0.19
SEMA3B-206ENST00000439487 EIF4E3Q8N5X7 224 aaKnown RBP13.87□□□□□ -0.19
SEMA3B-206ENST00000439487 TMEM75Q8N9X5 138 aa13.87□□□□□ -0.19
SEMA3B-206ENST00000439487 C8orf49Q96NF6 230 aa13.87□□□□□ -0.19
SEMA3B-206ENST00000439487 LYSTQ99698 3801 aa13.87□□□□□ -0.19
SEMA3B-206ENST00000439487 LINC00467Q9BRT7 94 aa13.87□□□□□ -0.19
SEMA3B-206ENST00000439487 KLK5Q9Y337 293 aaPredicted RBP13.87□□□□□ -0.19
SEMA3B-206ENST00000439487 IGHV1OR15-1A0A075B7D0 117 aa13.86□□□□□ -0.19
SEMA3B-206ENST00000439487 TRAV10A0A0B4J240 114 aa13.86□□□□□ -0.19
SEMA3B-206ENST00000439487 CBY3A6NI87 242 aa13.86□□□□□ -0.19
SEMA3B-206ENST00000439487 LYRM9A8MSI8 78 aa13.86□□□□□ -0.19
SEMA3B-206ENST00000439487 C11orf94C9JXX5 98 aa13.86□□□□□ -0.19
SEMA3B-206ENST00000439487 DAD1P61803 113 aa13.86□□□□□ -0.19
SEMA3B-206ENST00000439487 Q6AWC8 147 aa13.86□□□□□ -0.19
SEMA3B-206ENST00000439487 HIST1H2BAQ96A08 127 aa13.86□□□□□ -0.19
SEMA3B-206ENST00000439487 NDFIP1Q9BT67 221 aa13.86□□□□□ -0.19
SEMA3B-206ENST00000439487 NOP10Q9NPE3 64 aaKnown RBP13.86□□□□□ -0.19
SEMA3B-206ENST00000439487 TP53TG3Q9ULZ0 132 aa13.86□□□□□ -0.19
SEMA3B-206ENST00000439487 TIMM8BQ9Y5J9 83 aaPredicted RBP13.86□□□□□ -0.19
SEMA3B-206ENST00000439487 ARL2-SNX15V9GYD0 113 aa13.86□□□□□ -0.19
SEMA3B-206ENST00000439487 DNAH1Q9P2D7 4330 aa13.86□□□□□ -0.19
SEMA3B-206ENST00000439487 TRAV1-1A0A0B4J248 108 aa13.85□□□□□ -0.19
SEMA3B-206ENST00000439487 PPT1P50897 306 aa13.85□□□□□ -0.19
SEMA3B-206ENST00000439487 ANXA2RQ3ZCQ2 193 aa13.85□□□□□ -0.19
SEMA3B-206ENST00000439487 MUC21Q5SSG8 566 aa13.85□□□□□ -0.19
SEMA3B-206ENST00000439487 ALKAL2Q6UX46 152 aa13.85□□□□□ -0.19
SEMA3B-206ENST00000439487 ALMS1Q8TCU4 4167 aa13.85□□□□□ -0.19
SEMA3B-206ENST00000439487 DEFB131BA0A096LNP1 70 aa13.84□□□□□ -0.19
SEMA3B-206ENST00000439487 FBLL1A6NHQ2 334 aaKnown RBP13.84□□□□□ -0.19
SEMA3B-206ENST00000439487 SNURFLB1AK76 121 aa13.84□□□□□ -0.19
SEMA3B-206ENST00000439487 DEFB130BP0DP73 79 aa13.84□□□□□ -0.19
SEMA3B-206ENST00000439487 DEFB130AP0DP74 79 aa13.84□□□□□ -0.19
SEMA3B-206ENST00000439487 C2CD4CQ8TF44 421 aa13.84□□□□□ -0.19
SEMA3B-206ENST00000439487 C11orf72Q8NBR9 251 aa13.83□□□□□ -0.2
SEMA3B-206ENST00000439487 GSN-AS1Q9NRJ2 163 aa13.83□□□□□ -0.2
SEMA3B-206ENST00000439487 GNG13Q9P2W3 67 aa13.83□□□□□ -0.2
SEMA3B-206ENST00000439487 TRAV21A0A0B4J279 112 aa13.82□□□□□ -0.2
SEMA3B-206ENST00000439487 IGLL5B9A064 214 aa13.82□□□□□ -0.2
SEMA3B-206ENST00000439487 TEX46H3BTG2 121 aa13.82□□□□□ -0.2
SEMA3B-206ENST00000439487 ZNF80P51504 273 aaPredicted RBP13.82□□□□□ -0.2
SEMA3B-206ENST00000439487 Q86TA4 180 aa13.82□□□□□ -0.2
SEMA3B-206ENST00000439487 ZNF680Q8NEM1 530 aa13.82□□□□□ -0.2
SEMA3B-206ENST00000439487 TCEAL7Q9BRU2 100 aa13.82□□□□□ -0.2
SEMA3B-206ENST00000439487 NAGKQ9UJ70 344 aa13.82□□□□□ -0.2
SEMA3B-206ENST00000439487 GCGP01275 180 aa13.81□□□□□ -0.2
SEMA3B-206ENST00000439487 HTN3P15516 51 aa13.81□□□□□ -0.2
SEMA3B-206ENST00000439487 SMUG1Q53HV7 270 aa13.81□□□□□ -0.2
SEMA3B-206ENST00000439487 SAPCD1Q5SSQ6 148 aa13.81□□□□□ -0.2
SEMA3B-206ENST00000439487 FAM159AQ6UWV7 190 aa13.81□□□□□ -0.2
SEMA3B-206ENST00000439487 MANBALQ9NQG1 85 aa13.81□□□□□ -0.2
SEMA3B-206ENST00000439487 KLF12Q9Y4X4 402 aa13.81□□□□□ -0.2
SEMA3B-206ENST00000439487 SCO2A0A1W2PP80 73 aa13.8□□□□□ -0.2
SEMA3B-206ENST00000439487 AKR1C3P42330 323 aa13.8□□□□□ -0.2
SEMA3B-206ENST00000439487 UBE2G1P62253 170 aa13.8□□□□□ -0.2
SEMA3B-206ENST00000439487 FMC1Q96HJ9 113 aa13.8□□□□□ -0.2
SEMA3B-206ENST00000439487 MUC4Q99102 2169 aa13.8□□□□□ -0.2
SEMA3B-206ENST00000439487 RYR2Q92736 4967 aa13.8□□□□□ -0.2
SEMA3B-206ENST00000439487 TCL1AP56279 114 aa13.79□□□□□ -0.2
SEMA3B-206ENST00000439487 DAZ2Q13117 558 aaKnown RBP13.79□□□□□ -0.2
SEMA3B-206ENST00000439487 TMEM183BQ1AE95 376 aa13.79□□□□□ -0.2
SEMA3B-206ENST00000439487 TMEM183AQ8IXX5 376 aa13.79□□□□□ -0.2
SEMA3B-206ENST00000439487 NACAE9PAV3 2078 aa13.78□□□□□ -0.2
SEMA3B-206ENST00000439487 LCE6AA0A183 80 aa13.78□□□□□ -0.2
SEMA3B-206ENST00000439487 GAGE12BA1L429 117 aa13.78□□□□□ -0.2
SEMA3B-206ENST00000439487 GNRH2O43555 120 aa13.78□□□□□ -0.2
SEMA3B-206ENST00000439487 GAGE7O76087 117 aa13.78□□□□□ -0.2
SEMA3B-206ENST00000439487 GAGE12FP0CL80 117 aa13.78□□□□□ -0.2
SEMA3B-206ENST00000439487 GAGE12GP0CL81 117 aa13.78□□□□□ -0.2
SEMA3B-206ENST00000439487 GAGE12IP0CL82 117 aa13.78□□□□□ -0.2
SEMA3B-206ENST00000439487 IBA57Q5T440 356 aaKnown RBP13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms