RNA–Protein interactions for RNA: ENST00000439160.6

TCOF1-205, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TCOF1, Length 4,644 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-205ENST00000439160 Q8N9W7 124 aa9.67□□□□□ -0.86
TCOF1-205ENST00000439160 ZC2HC1AQ96GY0 325 aa9.67□□□□□ -0.86
TCOF1-205ENST00000439160 MRPL36Q9P0J6 103 aaKnown RBP9.67□□□□□ -0.86
TCOF1-205ENST00000439160 LINC01619G3V211 115 aa9.67□□□□□ -0.86
TCOF1-205ENST00000439160 COX6CP09669 75 aa9.67□□□□□ -0.86
TCOF1-205ENST00000439160 PATE2Q6UY27 113 aa9.67□□□□□ -0.86
TCOF1-205ENST00000439160 GFRA4Q9GZZ7 299 aa9.67□□□□□ -0.86
TCOF1-205ENST00000439160 EPG5Q9HCE0 2579 aa9.66□□□□□ -0.86
TCOF1-205ENST00000439160 IGLV2-23P01705 113 aa9.66□□□□□ -0.86
TCOF1-205ENST00000439160 NPBQ8NG41 125 aa9.66□□□□□ -0.86
TCOF1-205ENST00000439160 TRAV12-2A0A075B6T6 113 aa9.66□□□□□ -0.86
TCOF1-205ENST00000439160 SLAQ13239 276 aa9.66□□□□□ -0.86
TCOF1-205ENST00000439160 NAA38Q9BRA0 125 aaKnown RBP9.66□□□□□ -0.86
TCOF1-205ENST00000439160 VPREB3Q9UKI3 123 aa9.66□□□□□ -0.86
TCOF1-205ENST00000439160 KNCNA6PVL3 124 aa9.66□□□□□ -0.86
TCOF1-205ENST00000439160 K7EN84 100 aa9.66□□□□□ -0.86
TCOF1-205ENST00000439160 C18orf32Q8TCD1 76 aa9.66□□□□□ -0.86
TCOF1-205ENST00000439160 CD28P10747 220 aa9.65□□□□□ -0.86
TCOF1-205ENST00000439160 CD300EQ496F6 205 aaPredicted RBP9.65□□□□□ -0.86
TCOF1-205ENST00000439160 MRPL27Q9P0M9 148 aaKnown RBP9.65□□□□□ -0.86
TCOF1-205ENST00000439160 KLK9Q9UKQ9 250 aa9.65□□□□□ -0.86
TCOF1-205ENST00000439160 hDV102S1A0JD36 115 aa9.65□□□□□ -0.86
TCOF1-205ENST00000439160 F6UB75 175 aa9.65□□□□□ -0.86
TCOF1-205ENST00000439160 APOMO95445 188 aa9.65□□□□□ -0.86
TCOF1-205ENST00000439160 CT83Q5H943 113 aa9.65□□□□□ -0.86
TCOF1-205ENST00000439160 FAM231DQ6ZW35 169 aa9.65□□□□□ -0.86
TCOF1-205ENST00000439160 PRORYQ9H606 182 aa9.65□□□□□ -0.86
TCOF1-205ENST00000439160 KMT2EQ8IZD2 1858 aa9.65□□□□□ -0.86
TCOF1-205ENST00000439160 UNC80Q8N2C7 3258 aa9.65□□□□□ -0.86
TCOF1-205ENST00000439160 IGLV11-55A0A075B6I3 123 aa9.65□□□□□ -0.86
TCOF1-205ENST00000439160 ZNF415Q09FC8 603 aa9.65□□□□□ -0.86
TCOF1-205ENST00000439160 FAM231BA6NCW3 169 aa9.65□□□□□ -0.87
TCOF1-205ENST00000439160 H3BUT2 72 aa9.65□□□□□ -0.87
TCOF1-205ENST00000439160 INSP01308 110 aa9.65□□□□□ -0.87
TCOF1-205ENST00000439160 PLA2G5P39877 138 aa9.65□□□□□ -0.87
TCOF1-205ENST00000439160 TMEM158Q8WZ71 300 aa9.65□□□□□ -0.87
TCOF1-205ENST00000439160 CSTL1Q9H114 145 aa9.65□□□□□ -0.87
TCOF1-205ENST00000439160 MS4A6AQ9H2W1 248 aa9.65□□□□□ -0.87
TCOF1-205ENST00000439160 CHTOPQ9Y3Y2 248 aaKnown RBP9.65□□□□□ -0.87
TCOF1-205ENST00000439160 DEFB136Q30KP8 78 aa9.64□□□□□ -0.87
TCOF1-205ENST00000439160 IGHV3-64A0A075B6Q5 118 aa9.64□□□□□ -0.87
TCOF1-205ENST00000439160 IGKCP01834 107 aa9.64□□□□□ -0.87
TCOF1-205ENST00000439160 TYMSP04818 313 aa9.64□□□□□ -0.87
TCOF1-205ENST00000439160 CTSGP08311 255 aa9.64□□□□□ -0.87
TCOF1-205ENST00000439160 SMIM13P0DJ93 91 aa9.64□□□□□ -0.87
TCOF1-205ENST00000439160 C1orf229Q6ZS94 237 aaPredicted RBP9.64□□□□□ -0.87
TCOF1-205ENST00000439160 CHCHD5Q9BSY4 110 aa9.64□□□□□ -0.87
TCOF1-205ENST00000439160 PRRC2AP48634 2157 aaKnown RBP9.64□□□□□ -0.87
TCOF1-205ENST00000439160 IGHV7-4-1A0A0J9YVY3 117 aa9.64□□□□□ -0.87
TCOF1-205ENST00000439160 TEX22C9J3V5 150 aa9.64□□□□□ -0.87
TCOF1-205ENST00000439160 ELANEP08246 267 aa9.64□□□□□ -0.87
TCOF1-205ENST00000439160 CMC4P56277 68 aaPredicted RBP9.64□□□□□ -0.87
TCOF1-205ENST00000439160 RNF114Q9Y508 228 aa9.64□□□□□ -0.87
TCOF1-205ENST00000439160 TNFRSF6BO95407 300 aa9.63□□□□□ -0.87
TCOF1-205ENST00000439160 MPV17L2Q567V2 206 aa9.63□□□□□ -0.87
TCOF1-205ENST00000439160 Q6ZWC4 215 aa9.63□□□□□ -0.87
TCOF1-205ENST00000439160 OR2K2Q8NGT1 345 aa9.63□□□□□ -0.87
TCOF1-205ENST00000439160 H3BRM9 83 aa9.63□□□□□ -0.87
TCOF1-205ENST00000439160 SYS1-DBNDD2H3BUS1 97 aa9.63□□□□□ -0.87
TCOF1-205ENST00000439160 Q0VG73 95 aa9.63□□□□□ -0.87
TCOF1-205ENST00000439160 ANXA2RQ3ZCQ2 193 aa9.63□□□□□ -0.87
TCOF1-205ENST00000439160 FAM104BQ5XKR9 115 aa9.63□□□□□ -0.87
TCOF1-205ENST00000439160 PRSS57Q6UWY2 283 aa9.63□□□□□ -0.87
TCOF1-205ENST00000439160 DYNAPQ8N1N2 210 aa9.63□□□□□ -0.87
TCOF1-205ENST00000439160 SFTA2Q6UW10 78 aa9.62□□□□□ -0.87
TCOF1-205ENST00000439160 C11orf1Q9H5F2 150 aa9.62□□□□□ -0.87
TCOF1-205ENST00000439160 MRPL16Q9NX20 251 aaKnown RBP9.62□□□□□ -0.87
TCOF1-205ENST00000439160 VCYO14598 125 aa9.62□□□□□ -0.87
TCOF1-205ENST00000439160 P0C879 139 aa9.62□□□□□ -0.87
TCOF1-205ENST00000439160 PRUNE2Q8WUY3 3088 aa9.62□□□□□ -0.87
TCOF1-205ENST00000439160 TANC2Q9HCD6 1990 aa9.62□□□□□ -0.87
TCOF1-205ENST00000439160 SMIM27A0A1W2PRY6 76 aa9.62□□□□□ -0.87
TCOF1-205ENST00000439160 PRSS46E5RG02 174 aa9.62□□□□□ -0.87
TCOF1-205ENST00000439160 OR13C6PQ8NH95 151 aa9.62□□□□□ -0.87
TCOF1-205ENST00000439160 AGPAT4-IT1Q9H0P7 198 aa9.62□□□□□ -0.87
TCOF1-205ENST00000439160 SIRPDQ9H106 197 aa9.62□□□□□ -0.87
TCOF1-205ENST00000439160 ZNF462Q96JM2 2506 aa9.62□□□□□ -0.87
TCOF1-205ENST00000439160 KIAA1549Q9HCM3 1950 aa9.62□□□□□ -0.87
TCOF1-205ENST00000439160 A0A0U1RRA0 63 aa9.62□□□□□ -0.87
TCOF1-205ENST00000439160 NPSP0C0P6 89 aa9.62□□□□□ -0.87
TCOF1-205ENST00000439160 DEFB130BP0DP73 79 aa9.61□□□□□ -0.87
TCOF1-205ENST00000439160 DEFB130AP0DP74 79 aa9.61□□□□□ -0.87
TCOF1-205ENST00000439160 GP9P14770 177 aa9.61□□□□□ -0.87
TCOF1-205ENST00000439160 LMO4P61968 165 aa9.61□□□□□ -0.87
TCOF1-205ENST00000439160 C5orf56Q8N8D9 126 aa9.61□□□□□ -0.87
TCOF1-205ENST00000439160 PHLDA1Q8WV24 401 aaPredicted RBP9.61□□□□□ -0.87
TCOF1-205ENST00000439160 FN1P02751 2386 aaKnown RBP9.61□□□□□ -0.87
TCOF1-205ENST00000439160 MTORP42345 2549 aa9.61□□□□□ -0.87
TCOF1-205ENST00000439160 HOXD3P31249 432 aaPredicted RBP9.61□□□□□ -0.87
TCOF1-205ENST00000439160 RPL36AP83881 106 aaKnown RBP9.61□□□□□ -0.87
TCOF1-205ENST00000439160 RPL36ALQ969Q0 106 aaKnown RBP9.61□□□□□ -0.87
TCOF1-205ENST00000439160 SPOCK3Q9BQ16 436 aa9.61□□□□□ -0.87
TCOF1-205ENST00000439160 NHP2Q9NX24 153 aaKnown RBP9.61□□□□□ -0.87
TCOF1-205ENST00000439160 SMPXQ9UHP9 88 aa9.61□□□□□ -0.87
TCOF1-205ENST00000439160 CDH23Q9H251 3354 aa9.61□□□□□ -0.87
TCOF1-205ENST00000439160 POLQO75417 2590 aa9.61□□□□□ -0.87
TCOF1-205ENST00000439160 A0A087X0K7 114 aa9.61□□□□□ -0.87
TCOF1-205ENST00000439160 FAM167A-AS1Q96KT0 104 aa9.61□□□□□ -0.87
TCOF1-205ENST00000439160 LTAP01374 205 aa9.6□□□□□ -0.87
TCOF1-205ENST00000439160 C1QTNF4Q9BXJ3 329 aa9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms