RNA–Protein interactions for RNA: ENST00000438704.6

HMGB2-202, Transcript of high mobility group box 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGB2, Length 1,032 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB2-202ENST00000438704 FAM19A4Q96LR4 140 aa5.74□□□□□ -1.49
HMGB2-202ENST00000438704 LINC00477Q96M19 166 aa5.74□□□□□ -1.49
HMGB2-202ENST00000438704 ODF3Q96PU9 254 aa5.74□□□□□ -1.49
HMGB2-202ENST00000438704 VGLL1Q99990 258 aa5.74□□□□□ -1.49
HMGB2-202ENST00000438704 NDFIP1Q9BT67 221 aa5.74□□□□□ -1.49
HMGB2-202ENST00000438704 RPH3ALQ9UNE2 315 aa5.74□□□□□ -1.49
HMGB2-202ENST00000438704 IGKV2-40A0A087WW87 121 aaPredicted RBP5.73□□□□□ -1.49
HMGB2-202ENST00000438704 TRAV25A0A0B4J276 109 aa5.73□□□□□ -1.49
HMGB2-202ENST00000438704 A0A1W2PPQ1 181 aa5.73□□□□□ -1.49
HMGB2-202ENST00000438704 ZNF705FA8MVS1 300 aaPredicted RBP5.73□□□□□ -1.49
HMGB2-202ENST00000438704 INAFM1C9JVW0 142 aa5.73□□□□□ -1.49
HMGB2-202ENST00000438704 PRAC2D3DTV9 90 aa5.73□□□□□ -1.49
HMGB2-202ENST00000438704 M0QZ24 198 aa5.73□□□□□ -1.49
HMGB2-202ENST00000438704 IGKV2D-40P01614 121 aaPredicted RBP5.73□□□□□ -1.49
HMGB2-202ENST00000438704 MT-ND6P03923 174 aa5.73□□□□□ -1.49
HMGB2-202ENST00000438704 CT45A10P0DMU9 189 aa5.73□□□□□ -1.49
HMGB2-202ENST00000438704 CRISP2P16562 243 aa5.73□□□□□ -1.49
HMGB2-202ENST00000438704 RPS10P46783 165 aaKnown RBP5.73□□□□□ -1.49
HMGB2-202ENST00000438704 CRIP1P50238 77 aa5.73□□□□□ -1.49
HMGB2-202ENST00000438704 ZNF138P52744 262 aa5.73□□□□□ -1.49
HMGB2-202ENST00000438704 SMUG1Q53HV7 270 aa5.73□□□□□ -1.49
HMGB2-202ENST00000438704 ACTL10Q5JWF8 245 aa5.73□□□□□ -1.49
HMGB2-202ENST00000438704 FAM162BQ5T6X4 162 aa5.73□□□□□ -1.49
HMGB2-202ENST00000438704 Q6AWC8 147 aa5.73□□□□□ -1.49
HMGB2-202ENST00000438704 C18orf65Q6ZTR6 163 aa5.73□□□□□ -1.49
HMGB2-202ENST00000438704 RNF182Q8N6D2 247 aa5.73□□□□□ -1.49
HMGB2-202ENST00000438704 NHLRC2Q8NBF2 726 aa5.73□□□□□ -1.49
HMGB2-202ENST00000438704 KLHL30-AS1Q8NEE0 82 aa5.73□□□□□ -1.49
HMGB2-202ENST00000438704 DPF1Q92782 380 aa5.73□□□□□ -1.49
HMGB2-202ENST00000438704 DAZAP1Q96EP5 407 aaKnown RBP5.73□□□□□ -1.49
HMGB2-202ENST00000438704 RAX2Q96IS3 184 aa5.73□□□□□ -1.49
HMGB2-202ENST00000438704 SGK494Q96LW2 274 aa5.73□□□□□ -1.49
HMGB2-202ENST00000438704 CLUHP3Q96NS8 147 aa5.73□□□□□ -1.49
HMGB2-202ENST00000438704 ASCL2Q99929 193 aa5.73□□□□□ -1.49
HMGB2-202ENST00000438704 GNB1LQ9BYB4 327 aa5.73□□□□□ -1.49
HMGB2-202ENST00000438704 AGPAT4-IT1Q9H0P7 198 aa5.73□□□□□ -1.49
HMGB2-202ENST00000438704 C11orf21Q9P2W6 132 aa5.73□□□□□ -1.49
HMGB2-202ENST00000438704 NAT8BQ9UHF3 227 aa5.73□□□□□ -1.49
HMGB2-202ENST00000438704 SETD2Q9BYW2 2564 aaPredicted RBP5.73□□□□□ -1.49
HMGB2-202ENST00000438704 LOC105371267A0A1B0GV96 52 aa5.72□□□□□ -1.49
HMGB2-202ENST00000438704 A0A1B0GXF2 115 aa5.72□□□□□ -1.49
HMGB2-202ENST00000438704 A8MTW9 85 aa5.72□□□□□ -1.49
HMGB2-202ENST00000438704 CCL24O00175 119 aa5.72□□□□□ -1.49
HMGB2-202ENST00000438704 CSN3P07498 182 aa5.72□□□□□ -1.49
HMGB2-202ENST00000438704 CD28P10747 220 aa5.72□□□□□ -1.49
HMGB2-202ENST00000438704 RPS20P60866 119 aaKnown RBP5.72□□□□□ -1.49
HMGB2-202ENST00000438704 HIST1H1AQ02539 215 aaPredicted RBP5.72□□□□□ -1.49
HMGB2-202ENST00000438704 TMEM78Q5T7P6 136 aa5.72□□□□□ -1.49
HMGB2-202ENST00000438704 IGFL4Q6B9Z1 124 aa5.72□□□□□ -1.49
HMGB2-202ENST00000438704 WDR73Q6P4I2 378 aa5.72□□□□□ -1.49
HMGB2-202ENST00000438704 RBPMS2Q6ZRY4 209 aaKnown RBP5.72□□□□□ -1.49
HMGB2-202ENST00000438704 NDUFA11Q86Y39 141 aa5.72□□□□□ -1.49
HMGB2-202ENST00000438704 OR8A1Q8NGG7 326 aa5.72□□□□□ -1.49
HMGB2-202ENST00000438704 NEU1Q99519 415 aa5.72□□□□□ -1.49
HMGB2-202ENST00000438704 MS4A6AQ9H2W1 248 aa5.72□□□□□ -1.49
HMGB2-202ENST00000438704 NF1P21359 2839 aa5.71□□□□□ -1.49
HMGB2-202ENST00000438704 BAHCC1Q9P281 2608 aa5.71□□□□□ -1.5
HMGB2-202ENST00000438704 SETXQ7Z333 2677 aaKnown RBP5.71□□□□□ -1.5
HMGB2-202ENST00000438704 A0A1B0GW15 77 aa5.71□□□□□ -1.5
HMGB2-202ENST00000438704 XKRY2A2RUG3 117 aa5.71□□□□□ -1.5
HMGB2-202ENST00000438704 FABP5P3A8MUU1 101 aa5.71□□□□□ -1.5
HMGB2-202ENST00000438704 TRGC2P03986 189 aa5.71□□□□□ -1.5
HMGB2-202ENST00000438704 SNRPD3P62318 126 aaKnown RBP5.71□□□□□ -1.5
HMGB2-202ENST00000438704 PAFAH1B2P68402 229 aa5.71□□□□□ -1.5
HMGB2-202ENST00000438704 RNF151Q2KHN1 245 aa5.71□□□□□ -1.5
HMGB2-202ENST00000438704 DEFB136Q30KP8 78 aa5.71□□□□□ -1.5
HMGB2-202ENST00000438704 COA6Q5JTJ3 125 aaKnown RBP5.71□□□□□ -1.5
HMGB2-202ENST00000438704 PRR27Q6MZM9 219 aa5.71□□□□□ -1.5
HMGB2-202ENST00000438704 CFAP161Q6P656 301 aa5.71□□□□□ -1.5
HMGB2-202ENST00000438704 Q6ZSN1 163 aa5.71□□□□□ -1.5
HMGB2-202ENST00000438704 GATD1Q8NB37 220 aa5.71□□□□□ -1.5
HMGB2-202ENST00000438704 ZNF738Q8NE65 137 aa5.71□□□□□ -1.5
HMGB2-202ENST00000438704 NUP35Q8NFH5 326 aa5.71□□□□□ -1.5
HMGB2-202ENST00000438704 OR10J6PQ8NGY7 276 aa5.71□□□□□ -1.5
HMGB2-202ENST00000438704 DLX4Q92988 240 aaPredicted RBP5.71□□□□□ -1.5
HMGB2-202ENST00000438704 CITED2Q99967 270 aaPredicted RBP5.71□□□□□ -1.5
HMGB2-202ENST00000438704 CNFNQ9BYD5 112 aa5.71□□□□□ -1.5
HMGB2-202ENST00000438704 GPR61Q9BZJ8 451 aa5.71□□□□□ -1.5
HMGB2-202ENST00000438704 C5orf52A6NGY3 159 aa5.7□□□□□ -1.5
HMGB2-202ENST00000438704 HIGD1CA8MV81 97 aa5.7□□□□□ -1.5
HMGB2-202ENST00000438704 KLLNB2CW77 178 aa5.7□□□□□ -1.5
HMGB2-202ENST00000438704 HIST1H2BKO60814 126 aa5.7□□□□□ -1.5
HMGB2-202ENST00000438704 SH2D1AO60880 128 aa5.7□□□□□ -1.5
HMGB2-202ENST00000438704 HLA-DQA1P01909 254 aa5.7□□□□□ -1.5
HMGB2-202ENST00000438704 HIST1H2BJP06899 126 aa5.7□□□□□ -1.5
HMGB2-202ENST00000438704 EDN2P20800 178 aa5.7□□□□□ -1.5
HMGB2-202ENST00000438704 HIST1H2BOP23527 126 aa5.7□□□□□ -1.5
HMGB2-202ENST00000438704 HIST1H2BBP33778 126 aa5.7□□□□□ -1.5
HMGB2-202ENST00000438704 HIST1H2BDP58876 126 aa5.7□□□□□ -1.5
HMGB2-202ENST00000438704 HIST1H2BCP62807 126 aa5.7□□□□□ -1.5
HMGB2-202ENST00000438704 ERCC8Q13216 396 aa5.7□□□□□ -1.5
HMGB2-202ENST00000438704 HIST2H2BEQ16778 126 aa5.7□□□□□ -1.5
HMGB2-202ENST00000438704 DEFB114Q30KQ6 69 aa5.7□□□□□ -1.5
HMGB2-202ENST00000438704 HIST2H2BFQ5QNW6 126 aaPredicted RBP5.7□□□□□ -1.5
HMGB2-202ENST00000438704 TMEM136Q6ZRR5 245 aa5.7□□□□□ -1.5
HMGB2-202ENST00000438704 Q71RC1 249 aaPredicted RBP5.7□□□□□ -1.5
HMGB2-202ENST00000438704 ZNF575Q86XF7 245 aa5.7□□□□□ -1.5
HMGB2-202ENST00000438704 ZFAND2AQ8N6M9 145 aa5.7□□□□□ -1.5
HMGB2-202ENST00000438704 OR2D3Q8NGH3 330 aa5.7□□□□□ -1.5
HMGB2-202ENST00000438704 OR2K2Q8NGT1 345 aa5.7□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms