RNA–Protein interactions for RNA: ENST00000438647.3

RAPGEF1-206, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

TSL 3

Gene RAPGEF1, Length 588 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-206ENST00000438647 GAGE12FP0CL80 117 aa17.42■□□□□ 0.38
RAPGEF1-206ENST00000438647 GAGE12GP0CL81 117 aa17.42■□□□□ 0.38
RAPGEF1-206ENST00000438647 GAGE12IP0CL82 117 aa17.42■□□□□ 0.38
RAPGEF1-206ENST00000438647 AKR1C8PQ5T2L2 129 aa17.42■□□□□ 0.38
RAPGEF1-206ENST00000438647 IBA57Q5T440 356 aaKnown RBP17.42■□□□□ 0.38
RAPGEF1-206ENST00000438647 UBE2DNLQ8IWF7 75 aa17.42■□□□□ 0.38
RAPGEF1-206ENST00000438647 C11orf72Q8NBR9 251 aa17.42■□□□□ 0.38
RAPGEF1-206ENST00000438647 ARPC5LQ9BPX5 153 aa17.42■□□□□ 0.38
RAPGEF1-206ENST00000438647 GSN-AS1Q9NRJ2 163 aa17.42■□□□□ 0.38
RAPGEF1-206ENST00000438647 EPPK1P58107 5090 aaKnown RBP17.42■□□□□ 0.38
RAPGEF1-206ENST00000438647 CTXND1A0A1B0GTU2 59 aa17.41■□□□□ 0.38
RAPGEF1-206ENST00000438647 ZNF345Q14585 488 aa17.41■□□□□ 0.38
RAPGEF1-206ENST00000438647 C5orf17Q8NAS9 161 aa17.41■□□□□ 0.38
RAPGEF1-206ENST00000438647 Q6AWC8 147 aa17.4■□□□□ 0.38
RAPGEF1-206ENST00000438647 IQCF2Q8IXL9 164 aa17.4■□□□□ 0.38
RAPGEF1-206ENST00000438647 HMSDA8MTL9 139 aa17.39■□□□□ 0.37
RAPGEF1-206ENST00000438647 K7EQM0 130 aa17.39■□□□□ 0.37
RAPGEF1-206ENST00000438647 TCL1AP56279 114 aa17.39■□□□□ 0.37
RAPGEF1-206ENST00000438647 RNF212Q495C1 297 aa17.39■□□□□ 0.37
RAPGEF1-206ENST00000438647 CYTL1Q9NRR1 136 aa17.39■□□□□ 0.37
RAPGEF1-206ENST00000438647 GNG5P63218 68 aa17.38■□□□□ 0.37
RAPGEF1-206ENST00000438647 Q6ZTI0 123 aa17.38■□□□□ 0.37
RAPGEF1-206ENST00000438647 KCNRGQ8N5I3 272 aa17.38■□□□□ 0.37
RAPGEF1-206ENST00000438647 TCRAP04437 139 aa17.37■□□□□ 0.37
RAPGEF1-206ENST00000438647 Q6ZQT7 251 aa17.37■□□□□ 0.37
RAPGEF1-206ENST00000438647 SSX7Q7RTT5 188 aa17.37■□□□□ 0.37
RAPGEF1-206ENST00000438647 NDFIP1Q9BT67 221 aa17.37■□□□□ 0.37
RAPGEF1-206ENST00000438647 DNAH10Q8IVF4 4471 aa17.37■□□□□ 0.37
RAPGEF1-206ENST00000438647 TRGV2A0A075B6R0 118 aa17.36■□□□□ 0.37
RAPGEF1-206ENST00000438647 TRGV1A0A0A0MS02 117 aa17.36■□□□□ 0.37
RAPGEF1-206ENST00000438647 TRAV8-1A0A0A6YYK1 113 aa17.36■□□□□ 0.37
RAPGEF1-206ENST00000438647 A0A1W2PRE2 83 aa17.36■□□□□ 0.37
RAPGEF1-206ENST00000438647 SUMO1P63165 101 aaKnown RBP17.36■□□□□ 0.37
RAPGEF1-206ENST00000438647 ZNF415Q09FC8 603 aa17.36■□□□□ 0.37
RAPGEF1-206ENST00000438647 OR5I1Q13606 314 aa17.36■□□□□ 0.37
RAPGEF1-206ENST00000438647 ZNF726P1Q15940 193 aa17.36■□□□□ 0.37
RAPGEF1-206ENST00000438647 FAM159AQ6UWV7 190 aa17.36■□□□□ 0.37
RAPGEF1-206ENST00000438647 C18orf15Q96N68 181 aa17.36■□□□□ 0.37
RAPGEF1-206ENST00000438647 TREM1Q9NP99 234 aa17.36■□□□□ 0.37
RAPGEF1-206ENST00000438647 TP53TG3Q9ULZ0 132 aa17.36■□□□□ 0.37
RAPGEF1-206ENST00000438647 A0A0D9SG52 128 aa17.35■□□□□ 0.37
RAPGEF1-206ENST00000438647 SPINK4O60575 86 aa17.35■□□□□ 0.37
RAPGEF1-206ENST00000438647 NUDT3O95989 172 aa17.35■□□□□ 0.37
RAPGEF1-206ENST00000438647 MUC21Q5SSG8 566 aa17.35■□□□□ 0.37
RAPGEF1-206ENST00000438647 KLF12Q9Y4X4 402 aa17.35■□□□□ 0.37
RAPGEF1-206ENST00000438647 TRAV21A0A0B4J279 112 aa17.34■□□□□ 0.37
RAPGEF1-206ENST00000438647 GGTLC3B5MD39 225 aa17.34■□□□□ 0.37
RAPGEF1-206ENST00000438647 LGALS9BQ3B8N2 356 aa17.34■□□□□ 0.37
RAPGEF1-206ENST00000438647 ATG101Q9BSB4 218 aa17.34■□□□□ 0.37
RAPGEF1-206ENST00000438647 TMPRSS5Q9H3S3 457 aa17.34■□□□□ 0.37
RAPGEF1-206ENST00000438647 EPDR1Q9UM22 224 aa17.34■□□□□ 0.37
RAPGEF1-206ENST00000438647 TRGV11A0A075B6L2 103 aa17.33■□□□□ 0.36
RAPGEF1-206ENST00000438647 FBLL1A6NHQ2 334 aaKnown RBP17.33■□□□□ 0.36
RAPGEF1-206ENST00000438647 FAM3BP58499 235 aaPredicted RBP17.33■□□□□ 0.36
RAPGEF1-206ENST00000438647 CYB561D1Q8N8Q1 229 aa17.33■□□□□ 0.36
RAPGEF1-206ENST00000438647 OR11H4Q8NGC9 324 aa17.33■□□□□ 0.36
RAPGEF1-206ENST00000438647 FRAS1Q86XX4 4008 aa17.32■□□□□ 0.36
RAPGEF1-206ENST00000438647 TRAV26-1A0A087WT03 109 aa17.32■□□□□ 0.36
RAPGEF1-206ENST00000438647 KANTRA0A1W2PQU2 76 aa17.32■□□□□ 0.36
RAPGEF1-206ENST00000438647 NKX6-2Q9C056 277 aaPredicted RBP17.32■□□□□ 0.36
RAPGEF1-206ENST00000438647 MAP1LC3B2A6NCE7 125 aa17.31■□□□□ 0.36
RAPGEF1-206ENST00000438647 HOXA5P20719 270 aa17.31■□□□□ 0.36
RAPGEF1-206ENST00000438647 TDRG1Q3Y452 100 aa17.31■□□□□ 0.36
RAPGEF1-206ENST00000438647 STOML3Q8TAV4 291 aa17.31■□□□□ 0.36
RAPGEF1-206ENST00000438647 TVP23CQ96ET8 276 aa17.31■□□□□ 0.36
RAPGEF1-206ENST00000438647 SGK494Q96LW2 274 aa17.31■□□□□ 0.36
RAPGEF1-206ENST00000438647 ZNF471Q9BX82 626 aaPredicted RBP17.31■□□□□ 0.36
RAPGEF1-206ENST00000438647 MAP1LC3BQ9GZQ8 125 aa17.31■□□□□ 0.36
RAPGEF1-206ENST00000438647 NAGKQ9UJ70 344 aa17.31■□□□□ 0.36
RAPGEF1-206ENST00000438647 F6UZH7 168 aa17.3■□□□□ 0.36
RAPGEF1-206ENST00000438647 H3BNG1 76 aa17.3■□□□□ 0.36
RAPGEF1-206ENST00000438647 BCL2L11O43521 198 aa17.3■□□□□ 0.36
RAPGEF1-206ENST00000438647 SEC11BP0C7V7 166 aa17.3■□□□□ 0.36
RAPGEF1-206ENST00000438647 FGF8P55075 233 aaPredicted RBP17.3■□□□□ 0.36
RAPGEF1-206ENST00000438647 EIF5AP63241 154 aaKnown RBP17.3■□□□□ 0.36
RAPGEF1-206ENST00000438647 TMEM183BQ1AE95 376 aa17.3■□□□□ 0.36
RAPGEF1-206ENST00000438647 TMEM183AQ8IXX5 376 aa17.3■□□□□ 0.36
RAPGEF1-206ENST00000438647 TMEM75Q8N9X5 138 aa17.3■□□□□ 0.36
RAPGEF1-206ENST00000438647 PSG8Q9UQ74 426 aa17.3■□□□□ 0.36
RAPGEF1-206ENST00000438647 IFNA7P01567 189 aa17.29■□□□□ 0.36
RAPGEF1-206ENST00000438647 CCL18P55774 89 aa17.29■□□□□ 0.36
RAPGEF1-206ENST00000438647 FLI1Q01543 452 aaPredicted RBP17.29■□□□□ 0.36
RAPGEF1-206ENST00000438647 ZFP69Q49AA0 526 aa17.29■□□□□ 0.36
RAPGEF1-206ENST00000438647 SPXQ9BT56 116 aa17.29■□□□□ 0.36
RAPGEF1-206ENST00000438647 MDFICQ9P1T7 246 aa17.29■□□□□ 0.36
RAPGEF1-206ENST00000438647 UMAD1C9J7I0 102 aa17.28■□□□□ 0.36
RAPGEF1-206ENST00000438647 UBE2G2P60604 165 aa17.28■□□□□ 0.36
RAPGEF1-206ENST00000438647 KCNS1Q96KK3 526 aa17.28■□□□□ 0.36
RAPGEF1-206ENST00000438647 MRPL16Q9NX20 251 aaKnown RBP17.28■□□□□ 0.36
RAPGEF1-206ENST00000438647 A0A0J9YY99 117 aa17.27■□□□□ 0.36
RAPGEF1-206ENST00000438647 PFDN1O60925 122 aa17.27■□□□□ 0.36
RAPGEF1-206ENST00000438647 PPT1P50897 306 aa17.27■□□□□ 0.36
RAPGEF1-206ENST00000438647 SAPCD1Q5SSQ6 148 aa17.27■□□□□ 0.36
RAPGEF1-206ENST00000438647 SDF2L1Q9HCN8 221 aa17.27■□□□□ 0.36
RAPGEF1-206ENST00000438647 FAM74A7A6NL05 159 aa17.26■□□□□ 0.35
RAPGEF1-206ENST00000438647 IGLV2-11P01706 119 aa17.26■□□□□ 0.35
RAPGEF1-206ENST00000438647 PRNTQ86SH4 94 aa17.26■□□□□ 0.35
RAPGEF1-206ENST00000438647 HIST1H2BAQ96A08 127 aa17.26■□□□□ 0.35
RAPGEF1-206ENST00000438647 BIRC6Q9NR09 4857 aa17.26■□□□□ 0.35
RAPGEF1-206ENST00000438647 SMUG1Q53HV7 270 aa17.25■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms