RNA–Protein interactions for RNA: ENST00000438518.5

HDAC6-208, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 610 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-208ENST00000438518 C9JCJ5 164 aa13.41□□□□□ -0.26
HDAC6-208ENST00000438518 SPRY2O43597 315 aa13.41□□□□□ -0.26
HDAC6-208ENST00000438518 SRP19P09132 144 aaKnown RBP13.41□□□□□ -0.26
HDAC6-208ENST00000438518 DEFB135Q30KP9 77 aa13.41□□□□□ -0.26
HDAC6-208ENST00000438518 Q6AWC8 147 aa13.41□□□□□ -0.26
HDAC6-208ENST00000438518 TMEM183AQ8IXX5 376 aa13.41□□□□□ -0.26
HDAC6-208ENST00000438518 TRAV12-2A0A075B6T6 113 aa13.4□□□□□ -0.26
HDAC6-208ENST00000438518 H7BYZ3 331 aa13.4□□□□□ -0.26
HDAC6-208ENST00000438518 UQCC3Q6UW78 93 aa13.4□□□□□ -0.26
HDAC6-208ENST00000438518 ZNF705AQ6ZN79 300 aaPredicted RBP13.4□□□□□ -0.26
HDAC6-208ENST00000438518 BAGE2Q86Y30 109 aa13.4□□□□□ -0.26
HDAC6-208ENST00000438518 TVP23CQ96ET8 276 aa13.4□□□□□ -0.26
HDAC6-208ENST00000438518 PARLQ9H300 379 aa13.4□□□□□ -0.26
HDAC6-208ENST00000438518 TRAV21A0A0B4J279 112 aa13.39□□□□□ -0.27
HDAC6-208ENST00000438518 GNG4P50150 75 aa13.39□□□□□ -0.27
HDAC6-208ENST00000438518 FAM74A3Q4VXF1 159 aa13.39□□□□□ -0.27
HDAC6-208ENST00000438518 NEU1Q99519 415 aa13.39□□□□□ -0.27
HDAC6-208ENST00000438518 ASCL2Q99929 193 aa13.39□□□□□ -0.27
HDAC6-208ENST00000438518 PYGO2Q9BRQ0 406 aa13.39□□□□□ -0.27
HDAC6-208ENST00000438518 TMEM208Q9BTX3 173 aa13.39□□□□□ -0.27
HDAC6-208ENST00000438518 DERL1Q9BUN8 251 aa13.39□□□□□ -0.27
HDAC6-208ENST00000438518 LINC00862A6NCI5 91 aa13.38□□□□□ -0.27
HDAC6-208ENST00000438518 SMIM9A6NGZ8 99 aa13.38□□□□□ -0.27
HDAC6-208ENST00000438518 J3KRW8 73 aa13.38□□□□□ -0.27
HDAC6-208ENST00000438518 GCGP01275 180 aa13.38□□□□□ -0.27
HDAC6-208ENST00000438518 BTN1A1Q13410 526 aa13.38□□□□□ -0.27
HDAC6-208ENST00000438518 CENPWQ5EE01 88 aa13.38□□□□□ -0.27
HDAC6-208ENST00000438518 C1orf158Q8N1D5 194 aa13.38□□□□□ -0.27
HDAC6-208ENST00000438518 EIF4E3Q8N5X7 224 aaKnown RBP13.38□□□□□ -0.27
HDAC6-208ENST00000438518 LINC00467Q9BRT7 94 aa13.38□□□□□ -0.27
HDAC6-208ENST00000438518 MLST8Q9BVC4 326 aa13.38□□□□□ -0.27
HDAC6-208ENST00000438518 BIN3Q9NQY0 253 aa13.38□□□□□ -0.27
HDAC6-208ENST00000438518 TRAV12-3A0A0B4J271 114 aa13.37□□□□□ -0.27
HDAC6-208ENST00000438518 ZNF324O75467 553 aaPredicted RBP13.37□□□□□ -0.27
HDAC6-208ENST00000438518 PFN1P07737 140 aaKnown RBP13.37□□□□□ -0.27
HDAC6-208ENST00000438518 RNASE4P34096 147 aaKnown RBP13.37□□□□□ -0.27
HDAC6-208ENST00000438518 PRR9Q5T870 116 aa13.37□□□□□ -0.27
HDAC6-208ENST00000438518 C8orf49Q96NF6 230 aa13.37□□□□□ -0.27
HDAC6-208ENST00000438518 OVOL2Q9BRP0 275 aa13.37□□□□□ -0.27
HDAC6-208ENST00000438518 FBN3Q75N90 2809 aa13.37□□□□□ -0.27
HDAC6-208ENST00000438518 MIFP14174 115 aa13.36□□□□□ -0.27
HDAC6-208ENST00000438518 KIR3DS1Q14943 382 aa13.36□□□□□ -0.27
HDAC6-208ENST00000438518 LY96Q9Y6Y9 160 aa13.36□□□□□ -0.27
HDAC6-208ENST00000438518 FABP5P3A8MUU1 101 aa13.35□□□□□ -0.27
HDAC6-208ENST00000438518 ZNF727A8MUV8 499 aa13.35□□□□□ -0.27
HDAC6-208ENST00000438518 RBMY1A1P0DJD3 496 aaKnown RBP13.35□□□□□ -0.27
HDAC6-208ENST00000438518 RBMY1CP0DJD4 496 aa13.35□□□□□ -0.27
HDAC6-208ENST00000438518 CEBPGP53567 150 aa13.35□□□□□ -0.27
HDAC6-208ENST00000438518 SRSF3P84103 164 aaKnown RBP13.35□□□□□ -0.27
HDAC6-208ENST00000438518 RBMY1FQ15415 496 aaKnown RBP13.35□□□□□ -0.27
HDAC6-208ENST00000438518 ZNF674Q2M3X9 581 aa13.35□□□□□ -0.27
HDAC6-208ENST00000438518 OR11H2Q8NH07 326 aa13.35□□□□□ -0.27
HDAC6-208ENST00000438518 LINC01587Q99440 93 aa13.35□□□□□ -0.27
HDAC6-208ENST00000438518 SMIM7Q9BQ49 75 aa13.35□□□□□ -0.27
HDAC6-208ENST00000438518 TRBV20OR9-2A0A075B6H5 130 aa13.34□□□□□ -0.27
HDAC6-208ENST00000438518 FAM162BQ5T6X4 162 aa13.34□□□□□ -0.27
HDAC6-208ENST00000438518 COMMD7Q86VX2 200 aa13.34□□□□□ -0.27
HDAC6-208ENST00000438518 ZC2HC1AQ96GY0 325 aa13.34□□□□□ -0.27
HDAC6-208ENST00000438518 KCNS1Q96KK3 526 aa13.34□□□□□ -0.27
HDAC6-208ENST00000438518 X6R8D5 127 aa13.34□□□□□ -0.27
HDAC6-208ENST00000438518 IGHV3OR16-12A0A075B7B8 117 aa13.33□□□□□ -0.28
HDAC6-208ENST00000438518 C9JQL5 133 aa13.33□□□□□ -0.28
HDAC6-208ENST00000438518 RRN3P1Q2M238 152 aa13.33□□□□□ -0.28
HDAC6-208ENST00000438518 TDRG1Q3Y452 100 aa13.33□□□□□ -0.28
HDAC6-208ENST00000438518 SOHLH1Q5JUK2 328 aa13.33□□□□□ -0.28
HDAC6-208ENST00000438518 FAM159AQ6UWV7 190 aa13.33□□□□□ -0.28
HDAC6-208ENST00000438518 DNAH9Q9NYC9 4486 aa13.33□□□□□ -0.28
HDAC6-208ENST00000438518 IGHV1OR15-1A0A075B7D0 117 aa13.32□□□□□ -0.28
HDAC6-208ENST00000438518 TMEM189A5PLL7 270 aa13.32□□□□□ -0.28
HDAC6-208ENST00000438518 IGLV2-8P01709 118 aa13.32□□□□□ -0.28
HDAC6-208ENST00000438518 ZNF80P51504 273 aaPredicted RBP13.32□□□□□ -0.28
HDAC6-208ENST00000438518 ANXA2RQ3ZCQ2 193 aa13.32□□□□□ -0.28
HDAC6-208ENST00000438518 ZNF493Q6ZR52 646 aa13.32□□□□□ -0.28
HDAC6-208ENST00000438518 NHLRC2Q8NBF2 726 aa13.31□□□□□ -0.28
HDAC6-208ENST00000438518 TMEM263Q8WUH6 116 aaKnown RBP13.31□□□□□ -0.28
HDAC6-208ENST00000438518 C16orf74Q96GX8 76 aa13.31□□□□□ -0.28
HDAC6-208ENST00000438518 RETNQ9HD89 108 aa13.31□□□□□ -0.28
HDAC6-208ENST00000438518 SFTA3P0C7M3 94 aa13.3□□□□□ -0.28
HDAC6-208ENST00000438518 MGST1P10620 155 aaKnown RBP13.3□□□□□ -0.28
HDAC6-208ENST00000438518 CRIP1P50238 77 aa13.3□□□□□ -0.28
HDAC6-208ENST00000438518 C11orf68Q9H3H3 251 aaKnown RBP13.3□□□□□ -0.28
HDAC6-208ENST00000438518 NAT8Q9UHE5 227 aa13.3□□□□□ -0.28
HDAC6-208ENST00000438518 PRKDCP78527 4128 aaKnown RBP13.3□□□□□ -0.28
HDAC6-208ENST00000438518 TRGV11A0A075B6L2 103 aa13.29□□□□□ -0.28
HDAC6-208ENST00000438518 SH2D1AO60880 128 aa13.29□□□□□ -0.28
HDAC6-208ENST00000438518 TMEM241Q24JQ0 296 aa13.29□□□□□ -0.28
HDAC6-208ENST00000438518 IBA57Q5T440 356 aaKnown RBP13.29□□□□□ -0.28
HDAC6-208ENST00000438518 Q8NAQ8 132 aa13.29□□□□□ -0.28
HDAC6-208ENST00000438518 OCC1Q8TAD7 63 aa13.29□□□□□ -0.28
HDAC6-208ENST00000438518 DAZAP1Q96EP5 407 aaKnown RBP13.29□□□□□ -0.28
HDAC6-208ENST00000438518 SDF2L1Q9HCN8 221 aa13.29□□□□□ -0.28
HDAC6-208ENST00000438518 CBY3A6NI87 242 aa13.28□□□□□ -0.28
HDAC6-208ENST00000438518 LINC01559Q495D7 138 aa13.28□□□□□ -0.28
HDAC6-208ENST00000438518 PRR27Q6MZM9 219 aa13.28□□□□□ -0.28
HDAC6-208ENST00000438518 LINC01551Q86U37 167 aa13.28□□□□□ -0.28
HDAC6-208ENST00000438518 RNASE8Q8TDE3 154 aaKnown RBP13.28□□□□□ -0.28
HDAC6-208ENST00000438518 PGPEP1LA6NFU8 196 aa13.27□□□□□ -0.29
HDAC6-208ENST00000438518 CXCL1P09341 107 aa13.27□□□□□ -0.29
HDAC6-208ENST00000438518 PNRC1Q12796 327 aaPredicted RBP13.27□□□□□ -0.29
HDAC6-208ENST00000438518 MUC21Q5SSG8 566 aa13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms