RNA–Protein interactions for RNA: ENST00000438419.6

TRAPPC13-204, Transcript of trafficking protein particle complex 13, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene TRAPPC13, Length 1,437 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-204ENST00000438419 RPL19P84098 196 aaKnown RBP1.23□□□□□ -2.21
TRAPPC13-204ENST00000438419 ZNF846Q147U1 533 aa1.23□□□□□ -2.21
TRAPPC13-204ENST00000438419 CDK5R1Q15078 307 aa1.23□□□□□ -2.21
TRAPPC13-204ENST00000438419 OR4D11Q8NGI4 311 aa1.23□□□□□ -2.21
TRAPPC13-204ENST00000438419 ADAT3Q96EY9 351 aaPredicted RBP1.23□□□□□ -2.21
TRAPPC13-204ENST00000438419 SMR3AQ99954 134 aa1.23□□□□□ -2.21
TRAPPC13-204ENST00000438419 ADAT1Q9BUB4 502 aaKnown RBP1.23□□□□□ -2.21
TRAPPC13-204ENST00000438419 RNF122Q9H9V4 155 aa1.23□□□□□ -2.21
TRAPPC13-204ENST00000438419 UTP11Q9Y3A2 253 aaKnown RBP1.23□□□□□ -2.21
TRAPPC13-204ENST00000438419 SVEP1Q4LDE5 3571 aa1.23□□□□□ -2.21
TRAPPC13-204ENST00000438419 PLXNA4Q9HCM2 1894 aa1.23□□□□□ -2.21
TRAPPC13-204ENST00000438419 ATG12O94817 140 aa1.23□□□□□ -2.21
TRAPPC13-204ENST00000438419 C1QBP02746 253 aa1.23□□□□□ -2.21
TRAPPC13-204ENST00000438419 S100A5P33763 92 aa1.23□□□□□ -2.21
TRAPPC13-204ENST00000438419 KRR1Q13601 381 aaKnown RBP1.23□□□□□ -2.21
TRAPPC13-204ENST00000438419 SURF2Q15527 256 aaPredicted RBP1.23□□□□□ -2.21
TRAPPC13-204ENST00000438419 Q6ZSA8 131 aa1.23□□□□□ -2.21
TRAPPC13-204ENST00000438419 OR13D1Q8NGV5 346 aa1.23□□□□□ -2.21
TRAPPC13-204ENST00000438419 AQP3Q92482 292 aa1.23□□□□□ -2.21
TRAPPC13-204ENST00000438419 SERPINI1Q99574 410 aa1.23□□□□□ -2.21
TRAPPC13-204ENST00000438419 HIST1H2BLQ99880 126 aa1.23□□□□□ -2.21
TRAPPC13-204ENST00000438419 SLC50A1Q9BRV3 221 aa1.23□□□□□ -2.21
TRAPPC13-204ENST00000438419 MIXL1Q9H2W2 232 aa1.23□□□□□ -2.21
TRAPPC13-204ENST00000438419 PYCARDQ9ULZ3 195 aa1.23□□□□□ -2.21
TRAPPC13-204ENST00000438419 EPDR1Q9UM22 224 aa1.23□□□□□ -2.21
TRAPPC13-204ENST00000438419 TRAV14DV4A0A0A6YYC5 116 aa1.22□□□□□ -2.21
TRAPPC13-204ENST00000438419 IGKV1-9A0A0C4DH69 117 aa1.22□□□□□ -2.21
TRAPPC13-204ENST00000438419 FUOMA2VDF0 154 aa1.22□□□□□ -2.21
TRAPPC13-204ENST00000438419 TMEM238C9JI98 176 aa1.22□□□□□ -2.21
TRAPPC13-204ENST00000438419 IFNA7P01567 189 aa1.22□□□□□ -2.21
TRAPPC13-204ENST00000438419 G0S2P27469 103 aa1.22□□□□□ -2.21
TRAPPC13-204ENST00000438419 SRP14P37108 136 aaKnown RBP1.22□□□□□ -2.21
TRAPPC13-204ENST00000438419 NCALDP61601 193 aa1.22□□□□□ -2.21
TRAPPC13-204ENST00000438419 EIF5AP63241 154 aaKnown RBP1.22□□□□□ -2.21
TRAPPC13-204ENST00000438419 TSNQ15631 228 aaKnown RBP1.22□□□□□ -2.21
TRAPPC13-204ENST00000438419 SPANXN5Q5MJ07 72 aa1.22□□□□□ -2.21
TRAPPC13-204ENST00000438419 FKBP1CQ5VVH2 108 aa1.22□□□□□ -2.21
TRAPPC13-204ENST00000438419 TMED4Q7Z7H5 227 aa1.22□□□□□ -2.21
TRAPPC13-204ENST00000438419 C15orf53Q8NAA6 179 aa1.22□□□□□ -2.21
TRAPPC13-204ENST00000438419 STAG3L4Q8TBR4 150 aa1.22□□□□□ -2.21
TRAPPC13-204ENST00000438419 TMEM133Q9H2Q1 129 aa1.22□□□□□ -2.21
TRAPPC13-204ENST00000438419 MED29Q9NX70 200 aa1.22□□□□□ -2.21
TRAPPC13-204ENST00000438419 MUC2Q02817 5179 aa1.21□□□□□ -2.21
TRAPPC13-204ENST00000438419 ZFC3H1O60293 1989 aaKnown RBP1.21□□□□□ -2.22
TRAPPC13-204ENST00000438419 HERC1Q15751 4861 aa1.21□□□□□ -2.22
TRAPPC13-204ENST00000438419 TRRAPQ9Y4A5 3859 aa1.21□□□□□ -2.22
TRAPPC13-204ENST00000438419 COL7A1Q02388 2944 aa1.21□□□□□ -2.22
TRAPPC13-204ENST00000438419 TRAV1-1A0A0B4J248 108 aa1.21□□□□□ -2.22
TRAPPC13-204ENST00000438419 G3V2T6 193 aa1.21□□□□□ -2.22
TRAPPC13-204ENST00000438419 CST8O60676 142 aa1.21□□□□□ -2.22
TRAPPC13-204ENST00000438419 IFNA1P01562 189 aa1.21□□□□□ -2.22
TRAPPC13-204ENST00000438419 GNG10P50151 68 aa1.21□□□□□ -2.22
TRAPPC13-204ENST00000438419 RRN3P1Q2M238 152 aa1.21□□□□□ -2.22
TRAPPC13-204ENST00000438419 LYG2Q86SG7 212 aa1.21□□□□□ -2.22
TRAPPC13-204ENST00000438419 REG4Q9BYZ8 158 aa1.21□□□□□ -2.22
TRAPPC13-204ENST00000438419 IMUPQ9GZP8 106 aa1.21□□□□□ -2.22
TRAPPC13-204ENST00000438419 GID8Q9NWU2 228 aa1.21□□□□□ -2.22
TRAPPC13-204ENST00000438419 TAS2R4Q9NYW5 299 aa1.21□□□□□ -2.22
TRAPPC13-204ENST00000438419 PRNDQ9UKY0 176 aa1.21□□□□□ -2.22
TRAPPC13-204ENST00000438419 PARP14Q460N5 1801 aa1.21□□□□□ -2.22
TRAPPC13-204ENST00000438419 SPEF2Q9C093 1822 aa1.21□□□□□ -2.22
TRAPPC13-204ENST00000438419 STAB2Q8WWQ8 2551 aa1.21□□□□□ -2.22
TRAPPC13-204ENST00000438419 F5P12259 2224 aa1.2□□□□□ -2.22
TRAPPC13-204ENST00000438419 KNTC1P50748 2209 aa1.2□□□□□ -2.22
TRAPPC13-204ENST00000438419 ABCA4P78363 2273 aa1.2□□□□□ -2.22
TRAPPC13-204ENST00000438419 CNTRLQ7Z7A1 2325 aa1.2□□□□□ -2.22
TRAPPC13-204ENST00000438419 MYH10P35580 1976 aa1.2□□□□□ -2.22
TRAPPC13-204ENST00000438419 EML5Q05BV3 1969 aa1.2□□□□□ -2.22
TRAPPC13-204ENST00000438419 EXPH5Q8NEV8 1989 aa1.2□□□□□ -2.22
TRAPPC13-204ENST00000438419 TRAV3A0A0B4J244 114 aa1.2□□□□□ -2.22
TRAPPC13-204ENST00000438419 C7orf71A4D174 169 aa1.2□□□□□ -2.22
TRAPPC13-204ENST00000438419 E5RI56 91 aa1.2□□□□□ -2.22
TRAPPC13-204ENST00000438419 OR2T1O43869 369 aa1.2□□□□□ -2.22
TRAPPC13-204ENST00000438419 NDUFC2O95298 119 aa1.2□□□□□ -2.22
TRAPPC13-204ENST00000438419 ASAH2BP0C7U1 165 aa1.2□□□□□ -2.22
TRAPPC13-204ENST00000438419 MGST1P10620 155 aaKnown RBP1.2□□□□□ -2.22
TRAPPC13-204ENST00000438419 RNASE4P34096 147 aaKnown RBP1.2□□□□□ -2.22
TRAPPC13-204ENST00000438419 GNG5P63218 68 aa1.2□□□□□ -2.22
TRAPPC13-204ENST00000438419 POU6F1Q14863 301 aa1.2□□□□□ -2.22
TRAPPC13-204ENST00000438419 RNASE10Q5GAN6 216 aaKnown RBP1.2□□□□□ -2.22
TRAPPC13-204ENST00000438419 PHF13Q86YI8 300 aaPredicted RBP1.2□□□□□ -2.22
TRAPPC13-204ENST00000438419 OR13C6PQ8NH95 151 aa1.2□□□□□ -2.22
TRAPPC13-204ENST00000438419 SLAMF6Q96DU3 332 aa1.2□□□□□ -2.22
TRAPPC13-204ENST00000438419 PRRT1Q99946 306 aa1.2□□□□□ -2.22
TRAPPC13-204ENST00000438419 HOPXQ9BPY8 73 aaPredicted RBP1.2□□□□□ -2.22
TRAPPC13-204ENST00000438419 NHP2Q9NX24 153 aaKnown RBP1.2□□□□□ -2.22
TRAPPC13-204ENST00000438419 OR5AC2Q9NZP5 309 aa1.2□□□□□ -2.22
TRAPPC13-204ENST00000438419 SS18L2Q9UHA2 77 aa1.2□□□□□ -2.22
TRAPPC13-204ENST00000438419 SLC35A3Q9Y2D2 325 aa1.2□□□□□ -2.22
TRAPPC13-204ENST00000438419 OBSL1O75147 1896 aa1.2□□□□□ -2.22
TRAPPC13-204ENST00000438419 ABCA13Q86UQ4 5058 aa1.2□□□□□ -2.22
TRAPPC13-204ENST00000438419 ESPL1Q14674 2120 aa1.2□□□□□ -2.22
TRAPPC13-204ENST00000438419 CEP192Q8TEP8 1941 aa1.2□□□□□ -2.22
TRAPPC13-204ENST00000438419 SCN8AQ9UQD0 1980 aa1.2□□□□□ -2.22
TRAPPC13-204ENST00000438419 SIPA1L3O60292 1781 aaPredicted RBP1.2□□□□□ -2.22
TRAPPC13-204ENST00000438419 DIDO1Q9BTC0 2240 aaKnown RBP1.19□□□□□ -2.22
TRAPPC13-204ENST00000438419 SCN3AQ9NY46 2000 aa1.19□□□□□ -2.22
TRAPPC13-204ENST00000438419 PKDREJQ9NTG1 2253 aa1.19□□□□□ -2.22
TRAPPC13-204ENST00000438419 AKAP6Q13023 2319 aa1.19□□□□□ -2.22
TRAPPC13-204ENST00000438419 DENND4CQ5VZ89 1909 aa1.19□□□□□ -2.22
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms