RNA–Protein interactions for RNA: ENST00000438008.5

NCSTN-208, Transcript of nicastrin, humanhuman

TSL 5

Gene NCSTN, Length 702 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCSTN-208ENST00000438008 C5orf17Q8NAS9 161 aa12.56□□□□□ -0.4
NCSTN-208ENST00000438008 RPH3ALQ9UNE2 315 aa12.56□□□□□ -0.4
NCSTN-208ENST00000438008 IGHV1OR15-1A0A075B7D0 117 aa12.55□□□□□ -0.4
NCSTN-208ENST00000438008 RGS13O14921 159 aa12.55□□□□□ -0.4
NCSTN-208ENST00000438008 P0DMU3 169 aa12.55□□□□□ -0.4
NCSTN-208ENST00000438008 FAM231AP0DMU4 169 aa12.55□□□□□ -0.4
NCSTN-208ENST00000438008 FAM231CP0DMU5 169 aa12.55□□□□□ -0.4
NCSTN-208ENST00000438008 GNG5P63218 68 aa12.55□□□□□ -0.4
NCSTN-208ENST00000438008 IBA57Q5T440 356 aaKnown RBP12.55□□□□□ -0.4
NCSTN-208ENST00000438008 Q6AWC8 147 aa12.55□□□□□ -0.4
NCSTN-208ENST00000438008 Q6ZQT7 251 aa12.55□□□□□ -0.4
NCSTN-208ENST00000438008 A0A1W2PRE2 83 aa12.54□□□□□ -0.4
NCSTN-208ENST00000438008 TCRAP04437 139 aa12.54□□□□□ -0.4
NCSTN-208ENST00000438008 SUMO1P63165 101 aaKnown RBP12.54□□□□□ -0.4
NCSTN-208ENST00000438008 GSN-AS1Q9NRJ2 163 aa12.54□□□□□ -0.4
NCSTN-208ENST00000438008 DNAH6Q9C0G6 4158 aa12.53□□□□□ -0.4
NCSTN-208ENST00000438008 GGTLC3B5MD39 225 aa12.53□□□□□ -0.4
NCSTN-208ENST00000438008 F5H768 121 aa12.53□□□□□ -0.4
NCSTN-208ENST00000438008 TCL1AP56279 114 aa12.53□□□□□ -0.4
NCSTN-208ENST00000438008 C15orf53Q8NAA6 179 aa12.53□□□□□ -0.4
NCSTN-208ENST00000438008 TVP23CQ96ET8 276 aa12.53□□□□□ -0.4
NCSTN-208ENST00000438008 TRAV8-1A0A0A6YYK1 113 aa12.52□□□□□ -0.41
NCSTN-208ENST00000438008 KANTRA0A1W2PQU2 76 aa12.52□□□□□ -0.41
NCSTN-208ENST00000438008 GAGE12BA1L429 117 aa12.52□□□□□ -0.41
NCSTN-208ENST00000438008 BCL2L11O43521 198 aa12.52□□□□□ -0.41
NCSTN-208ENST00000438008 GAGE7O76087 117 aa12.52□□□□□ -0.41
NCSTN-208ENST00000438008 SEC11BP0C7V7 166 aa12.52□□□□□ -0.41
NCSTN-208ENST00000438008 GAGE12FP0CL80 117 aa12.52□□□□□ -0.41
NCSTN-208ENST00000438008 GAGE12GP0CL81 117 aa12.52□□□□□ -0.41
NCSTN-208ENST00000438008 GAGE12IP0CL82 117 aa12.52□□□□□ -0.41
NCSTN-208ENST00000438008 Q6ZNX1 250 aa12.52□□□□□ -0.41
NCSTN-208ENST00000438008 IQCF2Q8IXL9 164 aa12.52□□□□□ -0.41
NCSTN-208ENST00000438008 POM121L12Q8N7R1 296 aa12.52□□□□□ -0.41
NCSTN-208ENST00000438008 C18orf15Q96N68 181 aa12.52□□□□□ -0.41
NCSTN-208ENST00000438008 TP53TG3Q9ULZ0 132 aa12.52□□□□□ -0.41
NCSTN-208ENST00000438008 EPDR1Q9UM22 224 aa12.52□□□□□ -0.41
NCSTN-208ENST00000438008 K7EQM0 130 aa12.51□□□□□ -0.41
NCSTN-208ENST00000438008 SPINK4O60575 86 aa12.51□□□□□ -0.41
NCSTN-208ENST00000438008 Q6ZTI0 123 aa12.51□□□□□ -0.41
NCSTN-208ENST00000438008 TMPRSS5Q9H3S3 457 aa12.51□□□□□ -0.41
NCSTN-208ENST00000438008 TREM1Q9NP99 234 aa12.51□□□□□ -0.41
NCSTN-208ENST00000438008 KLF12Q9Y4X4 402 aa12.51□□□□□ -0.41
NCSTN-208ENST00000438008 MAP1LC3B2A6NCE7 125 aa12.5□□□□□ -0.41
NCSTN-208ENST00000438008 FBLL1A6NHQ2 334 aaKnown RBP12.5□□□□□ -0.41
NCSTN-208ENST00000438008 FGF8P55075 233 aaPredicted RBP12.5□□□□□ -0.41
NCSTN-208ENST00000438008 TDRG1Q3Y452 100 aa12.5□□□□□ -0.41
NCSTN-208ENST00000438008 TCTE3Q8IZS6 198 aa12.5□□□□□ -0.41
NCSTN-208ENST00000438008 CYB561D1Q8N8Q1 229 aa12.5□□□□□ -0.41
NCSTN-208ENST00000438008 ZNF471Q9BX82 626 aaPredicted RBP12.5□□□□□ -0.41
NCSTN-208ENST00000438008 NKX6-2Q9C056 277 aaPredicted RBP12.5□□□□□ -0.41
NCSTN-208ENST00000438008 MAP1LC3BQ9GZQ8 125 aa12.5□□□□□ -0.41
NCSTN-208ENST00000438008 TRAV21A0A0B4J279 112 aa12.49□□□□□ -0.41
NCSTN-208ENST00000438008 UMAD1C9J7I0 102 aa12.49□□□□□ -0.41
NCSTN-208ENST00000438008 IGLV2-11P01706 119 aa12.49□□□□□ -0.41
NCSTN-208ENST00000438008 EIF5AP63241 154 aaKnown RBP12.49□□□□□ -0.41
NCSTN-208ENST00000438008 LGALS9BQ3B8N2 356 aa12.49□□□□□ -0.41
NCSTN-208ENST00000438008 RNF212Q495C1 297 aa12.49□□□□□ -0.41
NCSTN-208ENST00000438008 MUC21Q5SSG8 566 aa12.49□□□□□ -0.41
NCSTN-208ENST00000438008 FAM159AQ6UWV7 190 aa12.49□□□□□ -0.41
NCSTN-208ENST00000438008 TMUB2Q71RG4 321 aa12.49□□□□□ -0.41
NCSTN-208ENST00000438008 TMEM75Q8N9X5 138 aa12.49□□□□□ -0.41
NCSTN-208ENST00000438008 ATG101Q9BSB4 218 aa12.49□□□□□ -0.41
NCSTN-208ENST00000438008 NDFIP1Q9BT67 221 aa12.49□□□□□ -0.41
NCSTN-208ENST00000438008 PSG8Q9UQ74 426 aa12.49□□□□□ -0.41
NCSTN-208ENST00000438008 TRGV1A0A0A0MS02 117 aa12.48□□□□□ -0.41
NCSTN-208ENST00000438008 FAM74A7A6NL05 159 aa12.48□□□□□ -0.41
NCSTN-208ENST00000438008 FHITP49789 147 aa12.48□□□□□ -0.41
NCSTN-208ENST00000438008 FLI1Q01543 452 aaPredicted RBP12.48□□□□□ -0.41
NCSTN-208ENST00000438008 ZNF415Q09FC8 603 aa12.48□□□□□ -0.41
NCSTN-208ENST00000438008 STOML3Q8TAV4 291 aa12.48□□□□□ -0.41
NCSTN-208ENST00000438008 SGK494Q96LW2 274 aa12.48□□□□□ -0.41
NCSTN-208ENST00000438008 TRGV11A0A075B6L2 103 aa12.47□□□□□ -0.41
NCSTN-208ENST00000438008 TRGV2A0A075B6R0 118 aa12.47□□□□□ -0.41
NCSTN-208ENST00000438008 F6UZH7 168 aa12.47□□□□□ -0.41
NCSTN-208ENST00000438008 PFDN1O60925 122 aa12.47□□□□□ -0.41
NCSTN-208ENST00000438008 HOXA5P20719 270 aa12.47□□□□□ -0.41
NCSTN-208ENST00000438008 UBE2G2P60604 165 aa12.47□□□□□ -0.41
NCSTN-208ENST00000438008 MBD3L1Q8WWY6 194 aa12.47□□□□□ -0.41
NCSTN-208ENST00000438008 MDFICQ9P1T7 246 aa12.47□□□□□ -0.41
NCSTN-208ENST00000438008 IFNA7P01567 189 aa12.46□□□□□ -0.41
NCSTN-208ENST00000438008 TPT1P13693 172 aaKnown RBP12.46□□□□□ -0.41
NCSTN-208ENST00000438008 OR5I1Q13606 314 aa12.46□□□□□ -0.41
NCSTN-208ENST00000438008 DPPA3Q6W0C5 159 aa12.46□□□□□ -0.41
NCSTN-208ENST00000438008 H3BNG1 76 aa12.45□□□□□ -0.42
NCSTN-208ENST00000438008 TMEM183BQ1AE95 376 aa12.45□□□□□ -0.42
NCSTN-208ENST00000438008 SAPCD1Q5SSQ6 148 aa12.45□□□□□ -0.42
NCSTN-208ENST00000438008 PRNTQ86SH4 94 aa12.45□□□□□ -0.42
NCSTN-208ENST00000438008 UBE2DNLQ8IWF7 75 aa12.45□□□□□ -0.42
NCSTN-208ENST00000438008 TMEM183AQ8IXX5 376 aa12.45□□□□□ -0.42
NCSTN-208ENST00000438008 HIST1H2BAQ96A08 127 aa12.45□□□□□ -0.42
NCSTN-208ENST00000438008 C8orf49Q96NF6 230 aa12.45□□□□□ -0.42
NCSTN-208ENST00000438008 SPXQ9BT56 116 aa12.45□□□□□ -0.42
NCSTN-208ENST00000438008 ARL2-SNX15V9GYD0 113 aa12.45□□□□□ -0.42
NCSTN-208ENST00000438008 TRAV26-1A0A087WT03 109 aa12.44□□□□□ -0.42
NCSTN-208ENST00000438008 PEX7O00628 323 aa12.44□□□□□ -0.42
NCSTN-208ENST00000438008 NUDT3O95989 172 aa12.44□□□□□ -0.42
NCSTN-208ENST00000438008 ZNF80P51504 273 aaPredicted RBP12.44□□□□□ -0.42
NCSTN-208ENST00000438008 FAM3BP58499 235 aaPredicted RBP12.44□□□□□ -0.42
NCSTN-208ENST00000438008 LGALSLQ3ZCW2 172 aaPredicted RBP12.44□□□□□ -0.42
NCSTN-208ENST00000438008 FAM213BQ8TBF2 198 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms