RNA–Protein interactions for RNA: ENST00000431640.5

DDX56-204, Transcript of DEAD-box helicase 56, humanhuman

TSL 1 (best) BASIC

Gene DDX56, Length 1,554 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-204ENST00000431640 ORM1P02763 201 aa9.8□□□□□ -0.84
DDX56-204ENST00000431640 CTRLP40313 264 aa9.8□□□□□ -0.84
DDX56-204ENST00000431640 ZNF80P51504 273 aaPredicted RBP9.8□□□□□ -0.84
DDX56-204ENST00000431640 PMCHL1Q16048 86 aa9.8□□□□□ -0.84
DDX56-204ENST00000431640 LINC01559Q495D7 138 aa9.8□□□□□ -0.84
DDX56-204ENST00000431640 FAM106AQ4KMX7 169 aa9.8□□□□□ -0.84
DDX56-204ENST00000431640 KIR2DL5AQ8N109 375 aa9.8□□□□□ -0.84
DDX56-204ENST00000431640 LINC00477Q96M19 166 aa9.8□□□□□ -0.84
DDX56-204ENST00000431640 C20orf144Q9BQM9 153 aa9.8□□□□□ -0.84
DDX56-204ENST00000431640 NDUFAF3Q9BU61 184 aa9.8□□□□□ -0.84
DDX56-204ENST00000431640 VAMP8Q9BV40 100 aa9.8□□□□□ -0.84
DDX56-204ENST00000431640 KLK15Q9H2R5 256 aa9.8□□□□□ -0.84
DDX56-204ENST00000431640 YAE1D1Q9NRH1 226 aa9.8□□□□□ -0.84
DDX56-204ENST00000431640 PEF1Q9UBV8 284 aaKnown RBP9.8□□□□□ -0.84
DDX56-204ENST00000431640 TMSB15BA0A087X1C1 80 aa9.8□□□□□ -0.84
DDX56-204ENST00000431640 IGHV3-11P01762 117 aa9.8□□□□□ -0.84
DDX56-204ENST00000431640 C3orf79P0CE67 100 aa9.8□□□□□ -0.84
DDX56-204ENST00000431640 IGLC6P0CF74 106 aa9.8□□□□□ -0.84
DDX56-204ENST00000431640 PRB4P10163 310 aaPredicted RBP9.8□□□□□ -0.84
DDX56-204ENST00000431640 BTF3P20290 206 aaKnown RBP9.8□□□□□ -0.84
DDX56-204ENST00000431640 LBHQ53QV2 105 aaPredicted RBP9.8□□□□□ -0.84
DDX56-204ENST00000431640 FAM104BQ5XKR9 115 aa9.8□□□□□ -0.84
DDX56-204ENST00000431640 FAM181BA6NEQ2 426 aa9.79□□□□□ -0.84
DDX56-204ENST00000431640 TRBV12-3P01733 135 aa9.79□□□□□ -0.84
DDX56-204ENST00000431640 IGHV4-59P01825 116 aa9.79□□□□□ -0.84
DDX56-204ENST00000431640 SAMD13Q5VXD3 122 aa9.79□□□□□ -0.84
DDX56-204ENST00000431640 UNQ9165/PRO28630Q6UXU0 137 aa9.79□□□□□ -0.84
DDX56-204ENST00000431640 Q6ZS46 218 aa9.79□□□□□ -0.84
DDX56-204ENST00000431640 URB1-AS1Q96HZ7 61 aa9.79□□□□□ -0.84
DDX56-204ENST00000431640 IGHV7-4-1A0A0J9YVY3 117 aa9.78□□□□□ -0.84
DDX56-204ENST00000431640 PSMB8P28062 276 aa9.78□□□□□ -0.84
DDX56-204ENST00000431640 TWIST1Q15672 202 aa9.78□□□□□ -0.84
DDX56-204ENST00000431640 GPHB5Q86YW7 130 aa9.78□□□□□ -0.84
DDX56-204ENST00000431640 Q8N976 141 aa9.78□□□□□ -0.84
DDX56-204ENST00000431640 CNFNQ9BYD5 112 aa9.78□□□□□ -0.84
DDX56-204ENST00000431640 DAZ1Q9NQZ3 744 aaKnown RBP9.78□□□□□ -0.84
DDX56-204ENST00000431640 U3KQK5 164 aa9.78□□□□□ -0.84
DDX56-204ENST00000431640 NSD1Q96L73 2696 aaPredicted RBP9.78□□□□□ -0.84
DDX56-204ENST00000431640 Q6YL49 198 aa9.77□□□□□ -0.85
DDX56-204ENST00000431640 ZNF738Q8NE65 137 aa9.77□□□□□ -0.85
DDX56-204ENST00000431640 OR10J6PQ8NGY7 276 aa9.77□□□□□ -0.85
DDX56-204ENST00000431640 TMEM191AQ9H0A3 160 aa9.77□□□□□ -0.85
DDX56-204ENST00000431640 VPREB3Q9UKI3 123 aa9.77□□□□□ -0.85
DDX56-204ENST00000431640 LEPROTL1O95214 131 aa9.76□□□□□ -0.85
DDX56-204ENST00000431640 FOXE3Q13461 319 aa9.76□□□□□ -0.85
DDX56-204ENST00000431640 ORMDL3Q8N138 153 aa9.76□□□□□ -0.85
DDX56-204ENST00000431640 PRSS3P2Q8NHM4 247 aa9.76□□□□□ -0.85
DDX56-204ENST00000431640 MIEN1Q9BRT3 115 aa9.76□□□□□ -0.85
DDX56-204ENST00000431640 RHPN1-AS1Q9BWJ2 59 aa9.76□□□□□ -0.85
DDX56-204ENST00000431640 SMPXQ9UHP9 88 aa9.76□□□□□ -0.85
DDX56-204ENST00000431640 UFC1Q9Y3C8 167 aa9.76□□□□□ -0.85
DDX56-204ENST00000431640 RNF114Q9Y508 228 aa9.76□□□□□ -0.85
DDX56-204ENST00000431640 F8P00451 2351 aa9.76□□□□□ -0.85
DDX56-204ENST00000431640 TRBV7-9A0A0J9YWB2 115 aa9.75□□□□□ -0.85
DDX56-204ENST00000431640 TMEM213A2RRL7 107 aa9.75□□□□□ -0.85
DDX56-204ENST00000431640 C2orf70A6NJV1 201 aa9.75□□□□□ -0.85
DDX56-204ENST00000431640 SOCS3O14543 225 aa9.75□□□□□ -0.85
DDX56-204ENST00000431640 PPBPP02775 128 aa9.75□□□□□ -0.85
DDX56-204ENST00000431640 KLHDC1Q8N7A1 406 aa9.75□□□□□ -0.85
DDX56-204ENST00000431640 TMEM70Q9BUB7 260 aa9.75□□□□□ -0.85
DDX56-204ENST00000431640 HSPB8Q9UJY1 196 aa9.75□□□□□ -0.85
DDX56-204ENST00000431640 MAST4O15021 2626 aa9.75□□□□□ -0.85
DDX56-204ENST00000431640 IGHV1-24A0A0C4DH33 117 aa9.75□□□□□ -0.85
DDX56-204ENST00000431640 C20orf202A1L168 122 aa9.75□□□□□ -0.85
DDX56-204ENST00000431640 INAFM1C9JVW0 142 aa9.75□□□□□ -0.85
DDX56-204ENST00000431640 CRXO43186 299 aaPredicted RBP9.75□□□□□ -0.85
DDX56-204ENST00000431640 ELANEP08246 267 aa9.75□□□□□ -0.85
DDX56-204ENST00000431640 FOSL1P15407 271 aa9.75□□□□□ -0.85
DDX56-204ENST00000431640 ID1P41134 155 aa9.75□□□□□ -0.85
DDX56-204ENST00000431640 RPL11P62913 178 aaKnown RBP9.75□□□□□ -0.85
DDX56-204ENST00000431640 TDRG1Q3Y452 100 aa9.75□□□□□ -0.85
DDX56-204ENST00000431640 EBLN2Q6P2I7 272 aa9.75□□□□□ -0.85
DDX56-204ENST00000431640 FA2HQ7L5A8 372 aa9.75□□□□□ -0.85
DDX56-204ENST00000431640 MRPL52Q86TS9 123 aaKnown RBP9.75□□□□□ -0.85
DDX56-204ENST00000431640 ZNF575Q86XF7 245 aa9.75□□□□□ -0.85
DDX56-204ENST00000431640 TEX29Q8N6K0 151 aa9.75□□□□□ -0.85
DDX56-204ENST00000431640 PRELID3AQ96N28 172 aa9.75□□□□□ -0.85
DDX56-204ENST00000431640 AP5S1Q9NUS5 200 aa9.75□□□□□ -0.85
DDX56-204ENST00000431640 TMEM160Q9NX00 188 aa9.75□□□□□ -0.85
DDX56-204ENST00000431640 PAM16Q9Y3D7 125 aa9.75□□□□□ -0.85
DDX56-204ENST00000431640 FN1P02751 2386 aaKnown RBP9.74□□□□□ -0.85
DDX56-204ENST00000431640 CKS2P33552 79 aa9.74□□□□□ -0.85
DDX56-204ENST00000431640 MRPL51Q4U2R6 128 aaKnown RBP9.74□□□□□ -0.85
DDX56-204ENST00000431640 TM4SF20Q53R12 229 aa9.74□□□□□ -0.85
DDX56-204ENST00000431640 SMIM15Q7Z3B0 74 aa9.74□□□□□ -0.85
DDX56-204ENST00000431640 LAMTOR2Q9Y2Q5 125 aa9.74□□□□□ -0.85
DDX56-204ENST00000431640 MTORP42345 2549 aa9.74□□□□□ -0.85
DDX56-204ENST00000431640 IGKV3D-20A0A0C4DH25 116 aa9.73□□□□□ -0.85
DDX56-204ENST00000431640 D6R8Y8 96 aa9.73□□□□□ -0.85
DDX56-204ENST00000431640 CSN3P07498 182 aa9.73□□□□□ -0.85
DDX56-204ENST00000431640 CACNG7P62955 275 aa9.73□□□□□ -0.85
DDX56-204ENST00000431640 SPATA45Q537H7 98 aa9.73□□□□□ -0.85
DDX56-204ENST00000431640 PRR31Q5SQ13 230 aa9.73□□□□□ -0.85
DDX56-204ENST00000431640 LURAP1LQ8IV03 231 aa9.73□□□□□ -0.85
DDX56-204ENST00000431640 AMN1Q8IY45 258 aa9.73□□□□□ -0.85
DDX56-204ENST00000431640 OR10AG1Q8NH19 301 aa9.73□□□□□ -0.85
DDX56-204ENST00000431640 C20orf173Q96LM9 149 aa9.73□□□□□ -0.85
DDX56-204ENST00000431640 MAP1LC3CQ9BXW4 147 aa9.73□□□□□ -0.85
DDX56-204ENST00000431640 M0QZ24 198 aa9.72□□□□□ -0.85
DDX56-204ENST00000431640 PET117Q6UWS5 81 aa9.72□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 63.2 ms