RNA–Protein interactions for RNA: ENST00000431461.1

CDC40-204, Transcript of cell division cycle 40, humanhuman

TSL 3

Gene CDC40, Length 400 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC40-204ENST00000431461 DLC1Q96QB1 1528 aa0.23□□□□□ -2.37
CDC40-204ENST00000431461 A2MP01023 1474 aa0.23□□□□□ -2.37
CDC40-204ENST00000431461 TCOF1Q13428 1488 aaKnown RBP0.23□□□□□ -2.37
CDC40-204ENST00000431461 DSPPQ9NZW4 1301 aa0.23□□□□□ -2.37
CDC40-204ENST00000431461 KIAA1549LQ6ZVL6 1849 aa0.23□□□□□ -2.37
CDC40-204ENST00000431461 TRAV2A0A0B4J234 112 aa0.23□□□□□ -2.37
CDC40-204ENST00000431461 A0A1W2PRE2 83 aa0.23□□□□□ -2.37
CDC40-204ENST00000431461 GABARAPH6UMI1 98 aa0.23□□□□□ -2.37
CDC40-204ENST00000431461 NEFHP12036 1026 aa0.23□□□□□ -2.37
CDC40-204ENST00000431461 GTF2A1P52655 376 aaPredicted RBP0.23□□□□□ -2.37
CDC40-204ENST00000431461 RHOHQ15669 191 aa0.23□□□□□ -2.37
CDC40-204ENST00000431461 IDO2Q6ZQW0 420 aa0.23□□□□□ -2.37
CDC40-204ENST00000431461 ZCCHC23Q6ZST2 131 aa0.23□□□□□ -2.37
CDC40-204ENST00000431461 THEM6Q8WUY1 208 aa0.23□□□□□ -2.37
CDC40-204ENST00000431461 MAGOHBQ96A72 148 aaKnown RBP0.23□□□□□ -2.37
CDC40-204ENST00000431461 MED31Q9Y3C7 131 aa0.23□□□□□ -2.37
CDC40-204ENST00000431461 A0A0G2JMM0 328 aa0.22□□□□□ -2.37
CDC40-204ENST00000431461 TMEM30CPA0ZSE6 113 aa0.22□□□□□ -2.37
CDC40-204ENST00000431461 TPST1O60507 370 aa0.22□□□□□ -2.37
CDC40-204ENST00000431461 APOC1P02654 83 aa0.22□□□□□ -2.37
CDC40-204ENST00000431461 S100A5P33763 92 aa0.22□□□□□ -2.37
CDC40-204ENST00000431461 RPL37P61927 97 aaKnown RBP0.22□□□□□ -2.37
CDC40-204ENST00000431461 KLKP1Q107X0 134 aa0.22□□□□□ -2.37
CDC40-204ENST00000431461 OR5A2Q8NGI9 324 aa0.22□□□□□ -2.37
CDC40-204ENST00000431461 CARD19Q96LW7 228 aa0.22□□□□□ -2.37
CDC40-204ENST00000431461 HOPXQ9BPY8 73 aaPredicted RBP0.22□□□□□ -2.37
CDC40-204ENST00000431461 FAM103A1Q9BTL3 118 aaKnown RBP0.22□□□□□ -2.37
CDC40-204ENST00000431461 MRPL36Q9P0J6 103 aaKnown RBP0.22□□□□□ -2.37
CDC40-204ENST00000431461 USP24Q9UPU5 2620 aa0.22□□□□□ -2.37
CDC40-204ENST00000431461 SPTBP11277 2137 aa0.22□□□□□ -2.37
CDC40-204ENST00000431461 ANKRD31Q8N7Z5 1873 aa0.21□□□□□ -2.38
CDC40-204ENST00000431461 NUP210Q8TEM1 1887 aaPredicted RBP0.21□□□□□ -2.38
CDC40-204ENST00000431461 KMT2DO14686 5537 aa0.21□□□□□ -2.38
CDC40-204ENST00000431461 UQCRQO14949 82 aa0.21□□□□□ -2.38
CDC40-204ENST00000431461 YPEL1O60688 119 aa0.21□□□□□ -2.38
CDC40-204ENST00000431461 EDF1O60869 148 aaKnown RBP0.21□□□□□ -2.38
CDC40-204ENST00000431461 HBDP02042 147 aa0.21□□□□□ -2.38
CDC40-204ENST00000431461 HIST1H1BP16401 226 aaKnown RBP0.21□□□□□ -2.38
CDC40-204ENST00000431461 CKS2P33552 79 aa0.21□□□□□ -2.38
CDC40-204ENST00000431461 RPL22P35268 128 aaKnown RBP0.21□□□□□ -2.38
CDC40-204ENST00000431461 POLR2HP52434 150 aaKnown RBP0.21□□□□□ -2.38
CDC40-204ENST00000431461 RPS28P62857 69 aaKnown RBP0.21□□□□□ -2.38
CDC40-204ENST00000431461 PSPHP78330 225 aa0.21□□□□□ -2.38
CDC40-204ENST00000431461 GLYATL3Q5SZD4 288 aa0.21□□□□□ -2.38
CDC40-204ENST00000431461 NAT14Q8WUY8 206 aa0.21□□□□□ -2.38
CDC40-204ENST00000431461 PPDPFLQ8WWR9 84 aa0.21□□□□□ -2.38
CDC40-204ENST00000431461 NABP2Q9BQ15 211 aa0.21□□□□□ -2.38
CDC40-204ENST00000431461 LIMD2Q9BT23 127 aa0.21□□□□□ -2.38
CDC40-204ENST00000431461 DDA1Q9BW61 102 aa0.21□□□□□ -2.38
CDC40-204ENST00000431461 ATG5Q9H1Y0 275 aa0.21□□□□□ -2.38
CDC40-204ENST00000431461 SMPXQ9UHP9 88 aa0.21□□□□□ -2.38
CDC40-204ENST00000431461 BCORL1Q5H9F3 1711 aa0.21□□□□□ -2.38
CDC40-204ENST00000431461 FGD6Q6ZV73 1430 aa0.21□□□□□ -2.38
CDC40-204ENST00000431461 MYH3P11055 1940 aa0.21□□□□□ -2.38
CDC40-204ENST00000431461 ATG2AQ2TAZ0 1938 aa0.21□□□□□ -2.38
CDC40-204ENST00000431461 LOC107984156A0A0G2JMH3 177 aa0.2□□□□□ -2.38
CDC40-204ENST00000431461 TEX49A0A1B0GTD5 131 aa0.2□□□□□ -2.38
CDC40-204ENST00000431461 PHGR1C9JFL3 82 aa0.2□□□□□ -2.38
CDC40-204ENST00000431461 H7BYZ3 331 aa0.2□□□□□ -2.38
CDC40-204ENST00000431461 CRYGSP22914 178 aa0.2□□□□□ -2.38
CDC40-204ENST00000431461 GNG10P50151 68 aa0.2□□□□□ -2.38
CDC40-204ENST00000431461 BLCAPP62952 87 aa0.2□□□□□ -2.38
CDC40-204ENST00000431461 FXYD3Q14802 87 aa0.2□□□□□ -2.38
CDC40-204ENST00000431461 TMEM128Q5BJH2 165 aa0.2□□□□□ -2.38
CDC40-204ENST00000431461 SAMD13Q5VXD3 122 aa0.2□□□□□ -2.38
CDC40-204ENST00000431461 SMIM15Q7Z3B0 74 aa0.2□□□□□ -2.38
CDC40-204ENST00000431461 NDUFA11Q86Y39 141 aa0.2□□□□□ -2.38
CDC40-204ENST00000431461 ARL17AQ8IVW1 177 aa0.2□□□□□ -2.38
CDC40-204ENST00000431461 TMEM35BQ8NCS4 154 aa0.2□□□□□ -2.38
CDC40-204ENST00000431461 OR51A4Q8NGJ6 313 aa0.2□□□□□ -2.38
CDC40-204ENST00000431461 COA4Q9NYJ1 87 aa0.2□□□□□ -2.38
CDC40-204ENST00000431461 HSPB11Q9Y547 144 aa0.2□□□□□ -2.38
CDC40-204ENST00000431461 USP54Q70EL1 1684 aa0.19□□□□□ -2.38
CDC40-204ENST00000431461 TRAV12-2A0A075B6T6 113 aa0.19□□□□□ -2.38
CDC40-204ENST00000431461 IGHV1-24A0A0C4DH33 117 aa0.19□□□□□ -2.38
CDC40-204ENST00000431461 TSTD3H0UI37 97 aa0.19□□□□□ -2.38
CDC40-204ENST00000431461 SLC25A4P12235 298 aa0.19□□□□□ -2.38
CDC40-204ENST00000431461 S100GP29377 79 aa0.19□□□□□ -2.38
CDC40-204ENST00000431461 PLGLB1Q02325 96 aa0.19□□□□□ -2.38
CDC40-204ENST00000431461 UNQ5815/PRO19632Q6UWF5 114 aa0.19□□□□□ -2.38
CDC40-204ENST00000431461 LYPD5Q6UWN5 251 aa0.19□□□□□ -2.38
CDC40-204ENST00000431461 OR4S1Q8NGB4 309 aa0.19□□□□□ -2.38
CDC40-204ENST00000431461 CCDC115Q96NT0 180 aa0.19□□□□□ -2.38
CDC40-204ENST00000431461 CBLN4Q9NTU7 201 aa0.19□□□□□ -2.38
CDC40-204ENST00000431461 TMEM14BQ9NUH8 114 aa0.19□□□□□ -2.38
CDC40-204ENST00000431461 TNCP24821 2201 aa0.19□□□□□ -2.38
CDC40-204ENST00000431461 MED23Q9ULK4 1368 aa0.19□□□□□ -2.38
CDC40-204ENST00000431461 A0A096LNT2 108 aa0.18□□□□□ -2.38
CDC40-204ENST00000431461 TRBV10-1A0A0K0K1A3 114 aa0.18□□□□□ -2.38
CDC40-204ENST00000431461 LOC107984640A0A0U1RRK4 108 aa0.18□□□□□ -2.38
CDC40-204ENST00000431461 DPM2O94777 84 aa0.18□□□□□ -2.38
CDC40-204ENST00000431461 POLR2JP52435 117 aaKnown RBP0.18□□□□□ -2.38
CDC40-204ENST00000431461 ZNF56Q15929 161 aa0.18□□□□□ -2.38
CDC40-204ENST00000431461 CSAG1Q6PB30 78 aa0.18□□□□□ -2.38
CDC40-204ENST00000431461 C5orf56Q8N8D9 126 aa0.18□□□□□ -2.38
CDC40-204ENST00000431461 DSCR8Q96T75 97 aa0.18□□□□□ -2.38
CDC40-204ENST00000431461 TAF9BQ9HBM6 251 aa0.18□□□□□ -2.38
CDC40-204ENST00000431461 BET1LQ9NYM9 111 aa0.18□□□□□ -2.38
CDC40-204ENST00000431461 TAS2R8Q9NYW2 309 aa0.18□□□□□ -2.38
CDC40-204ENST00000431461 METTL1Q9UBP6 276 aaKnown RBP0.18□□□□□ -2.38
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms