RNA–Protein interactions for RNA: ENST00000431039.1

TTC28-202, Transcript of tetratricopeptide repeat domain 28, humanhuman

TSL 3

Gene TTC28, Length 905 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-202ENST00000431039 SMIM7Q9BQ49 75 aa12.13□□□□□ -0.47
TTC28-202ENST00000431039 ZFP30Q9Y2G7 519 aa12.13□□□□□ -0.47
TTC28-202ENST00000431039 LTAP01374 205 aa12.12□□□□□ -0.47
TTC28-202ENST00000431039 CT45A10P0DMU9 189 aa12.12□□□□□ -0.47
TTC28-202ENST00000431039 CENPWQ5EE01 88 aa12.12□□□□□ -0.47
TTC28-202ENST00000431039 SAPCD1Q5SSQ6 148 aa12.12□□□□□ -0.47
TTC28-202ENST00000431039 PRNTQ86SH4 94 aa12.12□□□□□ -0.47
TTC28-202ENST00000431039 FAM19A4Q96LR4 140 aa12.12□□□□□ -0.47
TTC28-202ENST00000431039 IGF2BP2-AS1Q96M15 143 aa12.12□□□□□ -0.47
TTC28-202ENST00000431039 TRBV20OR9-2A0A075B6H5 130 aa12.11□□□□□ -0.47
TTC28-202ENST00000431039 GNG4P50150 75 aa12.11□□□□□ -0.47
TTC28-202ENST00000431039 C10orf91Q5T1B1 145 aa12.11□□□□□ -0.47
TTC28-202ENST00000431039 STHQ8IWL8 128 aa12.11□□□□□ -0.47
TTC28-202ENST00000431039 OR4B1Q8NGF8 309 aa12.11□□□□□ -0.47
TTC28-202ENST00000431039 TVP23CQ96ET8 276 aa12.11□□□□□ -0.47
TTC28-202ENST00000431039 SMIM12Q96EX1 92 aa12.11□□□□□ -0.47
TTC28-202ENST00000431039 NDFIP1Q9BT67 221 aa12.11□□□□□ -0.47
TTC28-202ENST00000431039 SEC11CQ9BY50 192 aa12.11□□□□□ -0.47
TTC28-202ENST00000431039 LY96Q9Y6Y9 160 aa12.11□□□□□ -0.47
TTC28-202ENST00000431039 FRAS1Q86XX4 4008 aa12.11□□□□□ -0.47
TTC28-202ENST00000431039 KRBOX1C9JBD0 128 aa12.1□□□□□ -0.47
TTC28-202ENST00000431039 F8W036 122 aa12.1□□□□□ -0.47
TTC28-202ENST00000431039 TMEM241Q24JQ0 296 aa12.1□□□□□ -0.47
TTC28-202ENST00000431039 AMTNQ6UX39 209 aa12.1□□□□□ -0.47
TTC28-202ENST00000431039 COX8CQ7Z4L0 72 aa12.1□□□□□ -0.47
TTC28-202ENST00000431039 TRPT1Q86TN4 253 aaKnown RBP12.1□□□□□ -0.47
TTC28-202ENST00000431039 TMEM183AQ8IXX5 376 aa12.1□□□□□ -0.47
TTC28-202ENST00000431039 Q8TAT8 98 aa12.1□□□□□ -0.47
TTC28-202ENST00000431039 MLST8Q9BVC4 326 aa12.1□□□□□ -0.47
TTC28-202ENST00000431039 IGLV2-8P01709 118 aa12.09□□□□□ -0.47
TTC28-202ENST00000431039 CRISP2P16562 243 aa12.09□□□□□ -0.47
TTC28-202ENST00000431039 ADCYAP1P18509 176 aa12.09□□□□□ -0.47
TTC28-202ENST00000431039 TSPOP30536 169 aa12.09□□□□□ -0.47
TTC28-202ENST00000431039 LEPP41159 167 aa12.09□□□□□ -0.47
TTC28-202ENST00000431039 NIPSNAP3BQ9BS92 247 aa12.09□□□□□ -0.47
TTC28-202ENST00000431039 NAT8Q9UHE5 227 aa12.09□□□□□ -0.47
TTC28-202ENST00000431039 IGKV3-20P01619 116 aa12.08□□□□□ -0.48
TTC28-202ENST00000431039 ZFAND2AQ8N6M9 145 aa12.08□□□□□ -0.48
TTC28-202ENST00000431039 CARHSP1Q9Y2V2 147 aaKnown RBP12.08□□□□□ -0.48
TTC28-202ENST00000431039 OCC1Q8TAD7 63 aa12.07□□□□□ -0.48
TTC28-202ENST00000431039 LINC00476Q8WZB0 136 aa12.07□□□□□ -0.48
TTC28-202ENST00000431039 SDF2L1Q9HCN8 221 aa12.07□□□□□ -0.48
TTC28-202ENST00000431039 DNAH10Q8IVF4 4471 aa12.06□□□□□ -0.48
TTC28-202ENST00000431039 KLLNB2CW77 178 aa12.06□□□□□ -0.48
TTC28-202ENST00000431039 AMBPP02760 352 aa12.06□□□□□ -0.48
TTC28-202ENST00000431039 NUTF2P61970 127 aaKnown RBP12.06□□□□□ -0.48
TTC28-202ENST00000431039 SMUG1Q53HV7 270 aa12.06□□□□□ -0.48
TTC28-202ENST00000431039 LINC01551Q86U37 167 aa12.06□□□□□ -0.48
TTC28-202ENST00000431039 C8orf49Q96NF6 230 aa12.06□□□□□ -0.48
TTC28-202ENST00000431039 OVOL2Q9BRP0 275 aa12.06□□□□□ -0.48
TTC28-202ENST00000431039 BIN3Q9NQY0 253 aa12.06□□□□□ -0.48
TTC28-202ENST00000431039 PGPEP1LA6NFU8 196 aa12.05□□□□□ -0.48
TTC28-202ENST00000431039 LY6G6CO95867 125 aa12.05□□□□□ -0.48
TTC28-202ENST00000431039 GCGP01275 180 aa12.05□□□□□ -0.48
TTC28-202ENST00000431039 CDKN1BP46527 198 aa12.05□□□□□ -0.48
TTC28-202ENST00000431039 RPL23P62829 140 aaKnown RBP12.05□□□□□ -0.48
TTC28-202ENST00000431039 PNRC1Q12796 327 aaPredicted RBP12.05□□□□□ -0.48
TTC28-202ENST00000431039 MORN3Q6PF18 240 aaPredicted RBP12.05□□□□□ -0.48
TTC28-202ENST00000431039 NHLRC2Q8NBF2 726 aa12.05□□□□□ -0.48
TTC28-202ENST00000431039 KMT2AQ03164 3969 aa12.05□□□□□ -0.48
TTC28-202ENST00000431039 LOC102724200A0A096LPH7 203 aaPredicted RBP12.04□□□□□ -0.48
TTC28-202ENST00000431039 CXorf65A6NEN9 183 aa12.04□□□□□ -0.48
TTC28-202ENST00000431039 K7EN84 100 aa12.04□□□□□ -0.48
TTC28-202ENST00000431039 GPX1P07203 203 aa12.04□□□□□ -0.48
TTC28-202ENST00000431039 MGST1P10620 155 aaKnown RBP12.04□□□□□ -0.48
TTC28-202ENST00000431039 RPL35AP18077 110 aaKnown RBP12.04□□□□□ -0.48
TTC28-202ENST00000431039 SPINK13Q1W4C9 94 aa12.04□□□□□ -0.48
TTC28-202ENST00000431039 ZC2HC1AQ96GY0 325 aa12.04□□□□□ -0.48
TTC28-202ENST00000431039 M0R2Z0 102 aa12.03□□□□□ -0.48
TTC28-202ENST00000431039 CRIP1P50238 77 aa12.03□□□□□ -0.48
TTC28-202ENST00000431039 KIR2DL5BA0A0G2JN68 375 aa12.02□□□□□ -0.49
TTC28-202ENST00000431039 KIR2DL5BA0A0G2JPC4 375 aa12.02□□□□□ -0.49
TTC28-202ENST00000431039 CRXO43186 299 aaPredicted RBP12.02□□□□□ -0.49
TTC28-202ENST00000431039 RNASE4P34096 147 aaKnown RBP12.02□□□□□ -0.49
TTC28-202ENST00000431039 ZNF80P51504 273 aaPredicted RBP12.02□□□□□ -0.49
TTC28-202ENST00000431039 KIR3DS1Q14943 382 aa12.02□□□□□ -0.49
TTC28-202ENST00000431039 ADIRFQ15847 76 aa12.02□□□□□ -0.49
TTC28-202ENST00000431039 PRR9Q5T870 116 aa12.02□□□□□ -0.49
TTC28-202ENST00000431039 Q6AWC8 147 aa12.02□□□□□ -0.49
TTC28-202ENST00000431039 KIR2DL5AQ8N109 375 aa12.02□□□□□ -0.49
TTC28-202ENST00000431039 KIR2DL5BQ8NHK3 375 aa12.02□□□□□ -0.49
TTC28-202ENST00000431039 CSTL1Q9H114 145 aa12.02□□□□□ -0.49
TTC28-202ENST00000431039 TRAV21A0A0B4J279 112 aa12.01□□□□□ -0.49
TTC28-202ENST00000431039 A0A0J9YWU9 116 aa12.01□□□□□ -0.49
TTC28-202ENST00000431039 C7orf71A4D174 169 aa12.01□□□□□ -0.49
TTC28-202ENST00000431039 FABP5P3A8MUU1 101 aa12.01□□□□□ -0.49
TTC28-202ENST00000431039 GIG44P09565 113 aaPredicted RBP12.01□□□□□ -0.49
TTC28-202ENST00000431039 FXYD7P58549 80 aa12.01□□□□□ -0.49
TTC28-202ENST00000431039 BTN1A1Q13410 526 aa12.01□□□□□ -0.49
TTC28-202ENST00000431039 OR5I1Q13606 314 aa12.01□□□□□ -0.49
TTC28-202ENST00000431039 FAM162BQ5T6X4 162 aa12.01□□□□□ -0.49
TTC28-202ENST00000431039 GFI1BQ5VTD9 330 aa12.01□□□□□ -0.49
TTC28-202ENST00000431039 ISOC2Q96AB3 205 aa12.01□□□□□ -0.49
TTC28-202ENST00000431039 C19orf71A6NCJ1 209 aa12□□□□□ -0.49
TTC28-202ENST00000431039 J3KRW8 73 aa12□□□□□ -0.49
TTC28-202ENST00000431039 ATP6V1G1O75348 118 aa12□□□□□ -0.49
TTC28-202ENST00000431039 ZNF324O75467 553 aaPredicted RBP12□□□□□ -0.49
TTC28-202ENST00000431039 APOC3P02656 99 aa12□□□□□ -0.49
TTC28-202ENST00000431039 PFN1P07737 140 aaKnown RBP12□□□□□ -0.49
TTC28-202ENST00000431039 PRR27Q6MZM9 219 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms