RNA–Protein interactions for RNA: ENST00000429762.7

VSX1-205, Transcript of visual system homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene VSX1, Length 1,977 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-205ENST00000429762 TMEM189A5PLL7 270 aa16.51■□□□□ 0.23
VSX1-205ENST00000429762 PAFAH1B2P68402 229 aa16.51■□□□□ 0.23
VSX1-205ENST00000429762 KIR3DS1Q14943 382 aa16.51■□□□□ 0.23
VSX1-205ENST00000429762 ACTL10Q5JWF8 245 aa16.51■□□□□ 0.23
VSX1-205ENST00000429762 TRAPPC1Q9Y5R8 145 aa16.51■□□□□ 0.23
VSX1-205ENST00000429762 IGKV3-20P01619 116 aa16.5■□□□□ 0.23
VSX1-205ENST00000429762 TRGC1P0CF51 173 aa16.5■□□□□ 0.23
VSX1-205ENST00000429762 NDUFA11Q86Y39 141 aa16.49■□□□□ 0.23
VSX1-205ENST00000429762 TPPP3Q9BW30 176 aa16.49■□□□□ 0.23
VSX1-205ENST00000429762 SORL1Q92673 2214 aa16.49■□□□□ 0.23
VSX1-205ENST00000429762 ORM1P02763 201 aa16.49■□□□□ 0.23
VSX1-205ENST00000429762 ZFAND2AQ8N6M9 145 aa16.49■□□□□ 0.23
VSX1-205ENST00000429762 C11orf21Q9P2W6 132 aa16.49■□□□□ 0.23
VSX1-205ENST00000429762 FABP5P3A8MUU1 101 aa16.48■□□□□ 0.23
VSX1-205ENST00000429762 SNURFLB1AK76 121 aa16.48■□□□□ 0.23
VSX1-205ENST00000429762 HIST1H2BKO60814 126 aa16.48■□□□□ 0.23
VSX1-205ENST00000429762 HIST1H2BJP06899 126 aa16.48■□□□□ 0.23
VSX1-205ENST00000429762 HIST1H2BOP23527 126 aa16.48■□□□□ 0.23
VSX1-205ENST00000429762 HIST1H2BBP33778 126 aa16.48■□□□□ 0.23
VSX1-205ENST00000429762 HIST1H2BDP58876 126 aa16.48■□□□□ 0.23
VSX1-205ENST00000429762 RAB4BP61018 213 aa16.48■□□□□ 0.23
VSX1-205ENST00000429762 HIST1H2BCP62807 126 aa16.48■□□□□ 0.23
VSX1-205ENST00000429762 ZNF124Q15973 351 aa16.48■□□□□ 0.23
VSX1-205ENST00000429762 HIST2H2BEQ16778 126 aa16.48■□□□□ 0.23
VSX1-205ENST00000429762 HIST2H2BFQ5QNW6 126 aaPredicted RBP16.48■□□□□ 0.23
VSX1-205ENST00000429762 HIST1H2BHQ93079 126 aa16.48■□□□□ 0.23
VSX1-205ENST00000429762 HIST1H2BNQ99877 126 aa16.48■□□□□ 0.23
VSX1-205ENST00000429762 HIST1H2BMQ99879 126 aa16.48■□□□□ 0.23
VSX1-205ENST00000429762 PPP1R14DQ9NXH3 145 aa16.48■□□□□ 0.23
VSX1-205ENST00000429762 NIPBLQ6KC79 2804 aaeCLIP16.48■□□□□ 0.23
VSX1-205ENST00000429762 GRIFINA4D1Z8 144 aa16.47■□□□□ 0.23
VSX1-205ENST00000429762 AGRNO00468 2067 aa16.47■□□□□ 0.23
VSX1-205ENST00000429762 FAM19A4Q96LR4 140 aa16.47■□□□□ 0.23
VSX1-205ENST00000429762 GFRA4Q9GZZ7 299 aa16.47■□□□□ 0.23
VSX1-205ENST00000429762 A0A0J9YX75 114 aa16.46■□□□□ 0.23
VSX1-205ENST00000429762 KNCNA6PVL3 124 aa16.46■□□□□ 0.23
VSX1-205ENST00000429762 CAMPP49913 170 aa16.46■□□□□ 0.23
VSX1-205ENST00000429762 DEFB131AP59861 70 aa16.46■□□□□ 0.23
VSX1-205ENST00000429762 SSTP61278 116 aa16.46■□□□□ 0.23
VSX1-205ENST00000429762 JMJD1CQ15652 2540 aa16.46■□□□□ 0.23
VSX1-205ENST00000429762 TMEM136Q6ZRR5 245 aa16.46■□□□□ 0.23
VSX1-205ENST00000429762 ZNF575Q86XF7 245 aa16.46■□□□□ 0.23
VSX1-205ENST00000429762 MRPL18Q9H0U6 180 aaKnown RBP16.46■□□□□ 0.23
VSX1-205ENST00000429762 MUC21A0A0G2JKD1 596 aa16.46■□□□□ 0.22
VSX1-205ENST00000429762 MUC21A0A140T8X8 626 aa16.46■□□□□ 0.22
VSX1-205ENST00000429762 SAP30O75446 220 aa16.46■□□□□ 0.22
VSX1-205ENST00000429762 RNASE4P34096 147 aaKnown RBP16.46■□□□□ 0.22
VSX1-205ENST00000429762 MUC21Q5SSG8 566 aa16.46■□□□□ 0.22
VSX1-205ENST00000429762 TEP1Q99973 2627 aaKnown RBP16.45■□□□□ 0.22
VSX1-205ENST00000429762 A0A1B0GUS0 222 aa16.45■□□□□ 0.22
VSX1-205ENST00000429762 SNRPEP62304 92 aaKnown RBP16.45■□□□□ 0.22
VSX1-205ENST00000429762 NDUFA6P56556 154 aa16.44■□□□□ 0.22
VSX1-205ENST00000429762 EBLN2Q6P2I7 272 aa16.44■□□□□ 0.22
VSX1-205ENST00000429762 LENEPQ9Y5L5 61 aa16.44■□□□□ 0.22
VSX1-205ENST00000429762 IGKV3D-20A0A0C4DH25 116 aa16.44■□□□□ 0.22
VSX1-205ENST00000429762 GPX1P07203 203 aa16.44■□□□□ 0.22
VSX1-205ENST00000429762 ARMS2P0C7Q2 107 aa16.44■□□□□ 0.22
VSX1-205ENST00000429762 SAV1Q9H4B6 383 aaPredicted RBP16.44■□□□□ 0.22
VSX1-205ENST00000429762 NAGKQ9UJ70 344 aa16.44■□□□□ 0.22
VSX1-205ENST00000429762 PF4P02776 101 aa16.43■□□□□ 0.22
VSX1-205ENST00000429762 S100A6P06703 90 aa16.43■□□□□ 0.22
VSX1-205ENST00000429762 SSBP4Q9BWG4 385 aaPredicted RBP16.43■□□□□ 0.22
VSX1-205ENST00000429762 A0A1B0GXF2 115 aa16.42■□□□□ 0.22
VSX1-205ENST00000429762 KIAA1644Q3SXP7 199 aa16.42■□□□□ 0.22
VSX1-205ENST00000429762 LINC01559Q495D7 138 aa16.42■□□□□ 0.22
VSX1-205ENST00000429762 LYZL1Q6UWQ5 148 aa16.42■□□□□ 0.22
VSX1-205ENST00000429762 GNB1LQ9BYB4 327 aa16.42■□□□□ 0.22
VSX1-205ENST00000429762 MAP6D1Q9H9H5 199 aa16.42■□□□□ 0.22
VSX1-205ENST00000429762 FAM231BA6NCW3 169 aa16.42■□□□□ 0.22
VSX1-205ENST00000429762 APRG1Q8IVJ8 170 aa16.42■□□□□ 0.22
VSX1-205ENST00000429762 ZNF256Q9Y2P7 627 aaPredicted RBP16.42■□□□□ 0.22
VSX1-205ENST00000429762 TRAV2A0A0B4J234 112 aa16.41■□□□□ 0.22
VSX1-205ENST00000429762 FOXI2Q6ZQN5 318 aa16.41■□□□□ 0.22
VSX1-205ENST00000429762 M0R2Z0 102 aa16.4■□□□□ 0.22
VSX1-205ENST00000429762 CRISP2P16562 243 aa16.4■□□□□ 0.22
VSX1-205ENST00000429762 FOXA3P55318 350 aaPredicted RBP16.4■□□□□ 0.22
VSX1-205ENST00000429762 WDR73Q6P4I2 378 aa16.4■□□□□ 0.22
VSX1-205ENST00000429762 SPATA3Q8NHX4 192 aa16.4■□□□□ 0.22
VSX1-205ENST00000429762 SPAG8Q99932 426 aaPredicted RBP16.4■□□□□ 0.22
VSX1-205ENST00000429762 SIGLEC8Q9NYZ4 499 aa16.4■□□□□ 0.22
VSX1-205ENST00000429762 TENM1Q9UKZ4 2725 aa16.4■□□□□ 0.22
VSX1-205ENST00000429762 TRAV12-2A0A075B6T6 113 aa16.4■□□□□ 0.22
VSX1-205ENST00000429762 XKRY2A2RUG3 117 aa16.4■□□□□ 0.22
VSX1-205ENST00000429762 OR4C46A6NHA9 309 aa16.4■□□□□ 0.22
VSX1-205ENST00000429762 FXYD7P58549 80 aa16.4■□□□□ 0.22
VSX1-205ENST00000429762 HBBP68871 147 aa16.4■□□□□ 0.22
VSX1-205ENST00000429762 RPS20P60866 119 aaKnown RBP16.39■□□□□ 0.21
VSX1-205ENST00000429762 SLAQ13239 276 aa16.39■□□□□ 0.21
VSX1-205ENST00000429762 ATP5L2Q7Z4Y8 100 aa16.39■□□□□ 0.21
VSX1-205ENST00000429762 FER1L6-AS1Q8NA97 138 aa16.39■□□□□ 0.21
VSX1-205ENST00000429762 SPINK13Q1W4C9 94 aa16.38■□□□□ 0.21
VSX1-205ENST00000429762 LINC00482Q8N8I6 264 aa16.38■□□□□ 0.21
VSX1-205ENST00000429762 TRAV25A0A0B4J276 109 aa16.38■□□□□ 0.21
VSX1-205ENST00000429762 TRAV21A0A0B4J279 112 aa16.38■□□□□ 0.21
VSX1-205ENST00000429762 A0A1B0GUT8 65 aa16.38■□□□□ 0.21
VSX1-205ENST00000429762 KLLNB2CW77 178 aa16.38■□□□□ 0.21
VSX1-205ENST00000429762 C5orf52A6NGY3 159 aa16.37■□□□□ 0.21
VSX1-205ENST00000429762 IGLC6P0CF74 106 aa16.37■□□□□ 0.21
VSX1-205ENST00000429762 GFI1BQ5VTD9 330 aa16.37■□□□□ 0.21
VSX1-205ENST00000429762 TRAV12-3A0A0B4J271 114 aa16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 104.7 ms