RNA–Protein interactions for RNA: ENST00000429713.6

SYNPO2-202, Transcript of synaptopodin 2, humanhuman

TSL 1 (best) BASIC

Gene SYNPO2, Length 9,920 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-202ENST00000429713 Q6ZT83 130 aa6.08□□□□□ -1.44
SYNPO2-202ENST00000429713 LINC00312Q9Y6C7 94 aa6.08□□□□□ -1.44
SYNPO2-202ENST00000429713 MGPP08493 103 aa6.08□□□□□ -1.44
SYNPO2-202ENST00000429713 UBE2L6O14933 153 aa6.08□□□□□ -1.44
SYNPO2-202ENST00000429713 FAM222AQ5U5X8 452 aa6.08□□□□□ -1.44
SYNPO2-202ENST00000429713 GATD1Q8NB37 220 aa6.08□□□□□ -1.44
SYNPO2-202ENST00000429713 C18orf15Q96N68 181 aa6.08□□□□□ -1.44
SYNPO2-202ENST00000429713 SMIM2Q9BVW6 85 aa6.08□□□□□ -1.44
SYNPO2-202ENST00000429713 CEP295Q9C0D2 2601 aa6.08□□□□□ -1.44
SYNPO2-202ENST00000429713 EPOPA6NHQ4 379 aa6.08□□□□□ -1.44
SYNPO2-202ENST00000429713 FAM201AQ5SY85 155 aa6.08□□□□□ -1.44
SYNPO2-202ENST00000429713 RNF144BQ7Z419 303 aa6.08□□□□□ -1.44
SYNPO2-202ENST00000429713 PCSK5Q92824 1860 aa6.07□□□□□ -1.44
SYNPO2-202ENST00000429713 SMIM26A0A096LP01 95 aa6.07□□□□□ -1.44
SYNPO2-202ENST00000429713 TRIP6Q15654 476 aaKnown RBP6.07□□□□□ -1.44
SYNPO2-202ENST00000429713 PATE3B3GLJ2 98 aa6.07□□□□□ -1.44
SYNPO2-202ENST00000429713 JMJD7-PLA2G4BH0Y9G9 81 aa6.07□□□□□ -1.44
SYNPO2-202ENST00000429713 TIMM21Q9BVV7 248 aa6.07□□□□□ -1.44
SYNPO2-202ENST00000429713 PAX9P55771 341 aa6.07□□□□□ -1.44
SYNPO2-202ENST00000429713 ZNF726P1Q15940 193 aa6.07□□□□□ -1.44
SYNPO2-202ENST00000429713 LY6G5BQ8NDX9 201 aa6.07□□□□□ -1.44
SYNPO2-202ENST00000429713 ITLN1Q8WWA0 313 aa6.07□□□□□ -1.44
SYNPO2-202ENST00000429713 SERP1Q9Y6X1 66 aa6.07□□□□□ -1.44
SYNPO2-202ENST00000429713 IGKV1-12A0A0C4DH73 117 aa6.07□□□□□ -1.44
SYNPO2-202ENST00000429713 WIPF3A6NGB9 483 aa6.07□□□□□ -1.44
SYNPO2-202ENST00000429713 IGKV1D-12P01611 117 aa6.07□□□□□ -1.44
SYNPO2-202ENST00000429713 BEX4Q9NWD9 120 aaPredicted RBP6.07□□□□□ -1.44
SYNPO2-202ENST00000429713 IGLV3-1P01715 115 aa6.07□□□□□ -1.44
SYNPO2-202ENST00000429713 CRYGBP07316 175 aa6.07□□□□□ -1.44
SYNPO2-202ENST00000429713 NPIPB3Q92617 1050 aa6.07□□□□□ -1.44
SYNPO2-202ENST00000429713 IGKV3D-15A0A087WSY6 115 aa6.07□□□□□ -1.44
SYNPO2-202ENST00000429713 CEACAM4O75871 244 aa6.07□□□□□ -1.44
SYNPO2-202ENST00000429713 C8orf31Q8N9H6 132 aa6.07□□□□□ -1.44
SYNPO2-202ENST00000429713 TRGV11A0A075B6L2 103 aa6.07□□□□□ -1.44
SYNPO2-202ENST00000429713 BCE1O60756 84 aa6.07□□□□□ -1.44
SYNPO2-202ENST00000429713 NDUFA3O95167 84 aa6.07□□□□□ -1.44
SYNPO2-202ENST00000429713 A0A1W2PR77 199 aa6.06□□□□□ -1.44
SYNPO2-202ENST00000429713 CELA3BP08861 270 aa6.06□□□□□ -1.44
SYNPO2-202ENST00000429713 LINC01620Q4KN68 170 aa6.06□□□□□ -1.44
SYNPO2-202ENST00000429713 VWCEQ96DN2 955 aa6.06□□□□□ -1.44
SYNPO2-202ENST00000429713 FGF6P10767 208 aa6.06□□□□□ -1.44
SYNPO2-202ENST00000429713 PMS2CLQ68D20 193 aa6.06□□□□□ -1.44
SYNPO2-202ENST00000429713 SSC4DQ8WTU2 575 aa6.06□□□□□ -1.44
SYNPO2-202ENST00000429713 GLRXP35754 106 aa6.06□□□□□ -1.44
SYNPO2-202ENST00000429713 IMMP1LQ96LU5 166 aa6.06□□□□□ -1.44
SYNPO2-202ENST00000429713 NOTCH2Q04721 2471 aa6.06□□□□□ -1.44
SYNPO2-202ENST00000429713 MRPL53Q96EL3 112 aaKnown RBP6.06□□□□□ -1.44
SYNPO2-202ENST00000429713 NTF4P34130 210 aa6.06□□□□□ -1.44
SYNPO2-202ENST00000429713 CR1LQ2VPA4 569 aa6.06□□□□□ -1.44
SYNPO2-202ENST00000429713 TRAV21A0A0B4J279 112 aa6.06□□□□□ -1.44
SYNPO2-202ENST00000429713 IGHV3-72A0A0B4J1Y9 119 aa6.06□□□□□ -1.44
SYNPO2-202ENST00000429713 C16orf92Q96LL3 132 aa6.06□□□□□ -1.44
SYNPO2-202ENST00000429713 PRSS22Q9GZN4 317 aa6.06□□□□□ -1.44
SYNPO2-202ENST00000429713 TRBV7-7A0A0K0K1E9 115 aa6.05□□□□□ -1.44
SYNPO2-202ENST00000429713 A4D1N5 150 aa6.05□□□□□ -1.44
SYNPO2-202ENST00000429713 OVOL1O14753 267 aa6.05□□□□□ -1.44
SYNPO2-202ENST00000429713 WFDC2Q14508 124 aa6.05□□□□□ -1.44
SYNPO2-202ENST00000429713 EBLN2Q6P2I7 272 aa6.05□□□□□ -1.44
SYNPO2-202ENST00000429713 OOSP1A8MZH6 123 aa6.05□□□□□ -1.44
SYNPO2-202ENST00000429713 THAP8Q8NA92 274 aa6.05□□□□□ -1.44
SYNPO2-202ENST00000429713 FAM236DA0A1B0GTK5 79 aa6.05□□□□□ -1.44
SYNPO2-202ENST00000429713 CGB1A6NKQ9 187 aa6.05□□□□□ -1.44
SYNPO2-202ENST00000429713 C16orf97H3BN30 126 aa6.05□□□□□ -1.44
SYNPO2-202ENST00000429713 SAA2P0DJI9 122 aaPredicted RBP6.05□□□□□ -1.44
SYNPO2-202ENST00000429713 FAM236CP0DP71 79 aa6.05□□□□□ -1.44
SYNPO2-202ENST00000429713 LGALS9O00182 355 aa6.05□□□□□ -1.44
SYNPO2-202ENST00000429713 IGHV4-39P01824 125 aa6.05□□□□□ -1.44
SYNPO2-202ENST00000429713 PRR20EP86478 221 aa6.05□□□□□ -1.44
SYNPO2-202ENST00000429713 PRR20CP86479 221 aa6.05□□□□□ -1.44
SYNPO2-202ENST00000429713 PRR20DP86480 221 aa6.05□□□□□ -1.44
SYNPO2-202ENST00000429713 PRR20BP86481 221 aa6.05□□□□□ -1.44
SYNPO2-202ENST00000429713 PRR20AP86496 221 aa6.05□□□□□ -1.44
SYNPO2-202ENST00000429713 J3QQQ9 107 aa6.05□□□□□ -1.44
SYNPO2-202ENST00000429713 NTN3O00634 580 aaPredicted RBP6.05□□□□□ -1.44
SYNPO2-202ENST00000429713 IGF2BP2-AS1Q96M15 143 aa6.05□□□□□ -1.44
SYNPO2-202ENST00000429713 MT-ATP8P03928 68 aa6.05□□□□□ -1.44
SYNPO2-202ENST00000429713 PRR19A6NJB7 356 aa6.04□□□□□ -1.44
SYNPO2-202ENST00000429713 FGFBP3Q8TAT2 258 aa6.04□□□□□ -1.44
SYNPO2-202ENST00000429713 ODF1Q14990 250 aa6.04□□□□□ -1.44
SYNPO2-202ENST00000429713 GGNQ86UU5 652 aa6.04□□□□□ -1.44
SYNPO2-202ENST00000429713 NDUFA11Q86Y39 141 aa6.04□□□□□ -1.44
SYNPO2-202ENST00000429713 SHANK2-AS3Q9BTD1 123 aa6.04□□□□□ -1.44
SYNPO2-202ENST00000429713 IGKV3-7A0A075B6H7 116 aa6.04□□□□□ -1.44
SYNPO2-202ENST00000429713 VWC2LB2RUY7 222 aa6.04□□□□□ -1.44
SYNPO2-202ENST00000429713 KHDC1LQ5JSQ8 128 aa6.04□□□□□ -1.44
SYNPO2-202ENST00000429713 RASL10AQ92737 203 aa6.04□□□□□ -1.44
SYNPO2-202ENST00000429713 ZNF581Q9P0T4 197 aa6.04□□□□□ -1.44
SYNPO2-202ENST00000429713 TRAV3A0A0B4J244 114 aa6.04□□□□□ -1.44
SYNPO2-202ENST00000429713 C5orf63A6NC05 138 aa6.04□□□□□ -1.44
SYNPO2-202ENST00000429713 H3BTX0 84 aa6.04□□□□□ -1.44
SYNPO2-202ENST00000429713 GATA2P23769 480 aaPredicted RBP6.04□□□□□ -1.44
SYNPO2-202ENST00000429713 RBM3P98179 157 aaKnown RBP6.04□□□□□ -1.44
SYNPO2-202ENST00000429713 ECSCRQ19T08 205 aa6.04□□□□□ -1.44
SYNPO2-202ENST00000429713 TIMM17AQ99595 171 aa6.04□□□□□ -1.44
SYNPO2-202ENST00000429713 E9PLN8 166 aa6.04□□□□□ -1.44
SYNPO2-202ENST00000429713 NDUFB1O75438 58 aa6.04□□□□□ -1.44
SYNPO2-202ENST00000429713 TRAV12-2A0A075B6T6 113 aa6.04□□□□□ -1.44
SYNPO2-202ENST00000429713 EFNA2O43921 213 aa6.04□□□□□ -1.44
SYNPO2-202ENST00000429713 VPREB3Q9UKI3 123 aa6.04□□□□□ -1.44
SYNPO2-202ENST00000429713 RANBP2P49792 3224 aaKnown RBP6.04□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 78.5 ms