RNA–Protein interactions for RNA: ENST00000428021.1

VRK2-204, Transcript of vaccinia related kinase 2, humanhuman

TSL 4

Gene VRK2, Length 553 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2-204ENST00000428021 DAZ2Q13117 558 aaKnown RBP11.76□□□□□ -0.53
VRK2-204ENST00000428021 TMEM88Q6PEY1 159 aa11.76□□□□□ -0.53
VRK2-204ENST00000428021 C5orf17Q8NAS9 161 aa11.76□□□□□ -0.53
VRK2-204ENST00000428021 TVP23CQ96ET8 276 aa11.76□□□□□ -0.53
VRK2-204ENST00000428021 TMPRSS5Q9H3S3 457 aa11.76□□□□□ -0.53
VRK2-204ENST00000428021 GSN-AS1Q9NRJ2 163 aa11.76□□□□□ -0.53
VRK2-204ENST00000428021 TP53TG3Q9ULZ0 132 aa11.76□□□□□ -0.53
VRK2-204ENST00000428021 IGHV1OR15-1A0A075B7D0 117 aa11.75□□□□□ -0.53
VRK2-204ENST00000428021 SNURFLB1AK76 121 aa11.75□□□□□ -0.53
VRK2-204ENST00000428021 SUMO1P63165 101 aaKnown RBP11.75□□□□□ -0.53
VRK2-204ENST00000428021 Q6AWC8 147 aa11.75□□□□□ -0.53
VRK2-204ENST00000428021 RGS13O14921 159 aa11.74□□□□□ -0.53
VRK2-204ENST00000428021 BCL2L11O43521 198 aa11.74□□□□□ -0.53
VRK2-204ENST00000428021 TCRAP04437 139 aa11.74□□□□□ -0.53
VRK2-204ENST00000428021 ATP5G1P05496 136 aa11.74□□□□□ -0.53
VRK2-204ENST00000428021 ATP5G3P48201 142 aa11.74□□□□□ -0.53
VRK2-204ENST00000428021 FGF8P55075 233 aaPredicted RBP11.74□□□□□ -0.53
VRK2-204ENST00000428021 ZNF680Q8NEM1 530 aa11.74□□□□□ -0.53
VRK2-204ENST00000428021 DNAH10Q8IVF4 4471 aa11.74□□□□□ -0.53
VRK2-204ENST00000428021 A0A1W2PRE2 83 aa11.73□□□□□ -0.53
VRK2-204ENST00000428021 GAGE12BA1L429 117 aa11.73□□□□□ -0.53
VRK2-204ENST00000428021 F5H768 121 aa11.73□□□□□ -0.53
VRK2-204ENST00000428021 GAGE7O76087 117 aa11.73□□□□□ -0.53
VRK2-204ENST00000428021 GAGE12FP0CL80 117 aa11.73□□□□□ -0.53
VRK2-204ENST00000428021 GAGE12GP0CL81 117 aa11.73□□□□□ -0.53
VRK2-204ENST00000428021 GAGE12IP0CL82 117 aa11.73□□□□□ -0.53
VRK2-204ENST00000428021 FHITP49789 147 aa11.73□□□□□ -0.53
VRK2-204ENST00000428021 TCL1AP56279 114 aa11.73□□□□□ -0.53
VRK2-204ENST00000428021 Q6ZTI0 123 aa11.73□□□□□ -0.53
VRK2-204ENST00000428021 TMUB2Q71RG4 321 aa11.73□□□□□ -0.53
VRK2-204ENST00000428021 IQCF2Q8IXL9 164 aa11.73□□□□□ -0.53
VRK2-204ENST00000428021 SGK494Q96LW2 274 aa11.73□□□□□ -0.53
VRK2-204ENST00000428021 EPDR1Q9UM22 224 aa11.73□□□□□ -0.53
VRK2-204ENST00000428021 KLF12Q9Y4X4 402 aa11.73□□□□□ -0.53
VRK2-204ENST00000428021 SERTM2A0A1B0GWG4 89 aa11.72□□□□□ -0.53
VRK2-204ENST00000428021 KANTRA0A1W2PQU2 76 aa11.72□□□□□ -0.53
VRK2-204ENST00000428021 IGLV2-11P01706 119 aa11.72□□□□□ -0.53
VRK2-204ENST00000428021 SEC11BP0C7V7 166 aa11.72□□□□□ -0.53
VRK2-204ENST00000428021 MUC21Q5SSG8 566 aa11.72□□□□□ -0.53
VRK2-204ENST00000428021 IBA57Q5T440 356 aaKnown RBP11.72□□□□□ -0.53
VRK2-204ENST00000428021 TCTE3Q8IZS6 198 aa11.72□□□□□ -0.53
VRK2-204ENST00000428021 ZNF471Q9BX82 626 aaPredicted RBP11.72□□□□□ -0.53
VRK2-204ENST00000428021 EPPK1P58107 5090 aaKnown RBP11.71□□□□□ -0.53
VRK2-204ENST00000428021 MAP1LC3B2A6NCE7 125 aa11.71□□□□□ -0.53
VRK2-204ENST00000428021 P0DMU3 169 aa11.71□□□□□ -0.53
VRK2-204ENST00000428021 FAM231AP0DMU4 169 aa11.71□□□□□ -0.53
VRK2-204ENST00000428021 FAM231CP0DMU5 169 aa11.71□□□□□ -0.53
VRK2-204ENST00000428021 UBE2G2P60604 165 aa11.71□□□□□ -0.53
VRK2-204ENST00000428021 MAP1LC3BQ9GZQ8 125 aa11.71□□□□□ -0.53
VRK2-204ENST00000428021 TREM1Q9NP99 234 aa11.71□□□□□ -0.53
VRK2-204ENST00000428021 FAM74A7A6NL05 159 aa11.7□□□□□ -0.54
VRK2-204ENST00000428021 F6UZH7 168 aa11.7□□□□□ -0.54
VRK2-204ENST00000428021 SPINK4O60575 86 aa11.7□□□□□ -0.54
VRK2-204ENST00000428021 HOXA5P20719 270 aa11.7□□□□□ -0.54
VRK2-204ENST00000428021 POM121L12Q8N7R1 296 aa11.7□□□□□ -0.54
VRK2-204ENST00000428021 CYB561D1Q8N8Q1 229 aa11.7□□□□□ -0.54
VRK2-204ENST00000428021 PSG8Q9UQ74 426 aa11.7□□□□□ -0.54
VRK2-204ENST00000428021 UMAD1C9J7I0 102 aa11.69□□□□□ -0.54
VRK2-204ENST00000428021 TDRG1Q3Y452 100 aa11.69□□□□□ -0.54
VRK2-204ENST00000428021 LGALSLQ3ZCW2 172 aaPredicted RBP11.69□□□□□ -0.54
VRK2-204ENST00000428021 C15orf53Q8NAA6 179 aa11.69□□□□□ -0.54
VRK2-204ENST00000428021 LINC00479Q96M42 142 aa11.69□□□□□ -0.54
VRK2-204ENST00000428021 C18orf15Q96N68 181 aa11.69□□□□□ -0.54
VRK2-204ENST00000428021 ATG101Q9BSB4 218 aa11.69□□□□□ -0.54
VRK2-204ENST00000428021 MDFICQ9P1T7 246 aa11.69□□□□□ -0.54
VRK2-204ENST00000428021 TRGV1A0A0A0MS02 117 aa11.68□□□□□ -0.54
VRK2-204ENST00000428021 K7EQM0 130 aa11.68□□□□□ -0.54
VRK2-204ENST00000428021 PFDN1O60925 122 aa11.68□□□□□ -0.54
VRK2-204ENST00000428021 ZNF80P51504 273 aaPredicted RBP11.68□□□□□ -0.54
VRK2-204ENST00000428021 FLI1Q01543 452 aaPredicted RBP11.68□□□□□ -0.54
VRK2-204ENST00000428021 TMEM75Q8N9X5 138 aa11.68□□□□□ -0.54
VRK2-204ENST00000428021 MBD3L1Q8WWY6 194 aa11.68□□□□□ -0.54
VRK2-204ENST00000428021 C8orf49Q96NF6 230 aa11.68□□□□□ -0.54
VRK2-204ENST00000428021 MUC4Q99102 2169 aa11.67□□□□□ -0.54
VRK2-204ENST00000428021 TRAV34A0A0B4J273 112 aa11.67□□□□□ -0.54
VRK2-204ENST00000428021 TRAV21A0A0B4J279 112 aa11.67□□□□□ -0.54
VRK2-204ENST00000428021 EIF5AP63241 154 aaKnown RBP11.67□□□□□ -0.54
VRK2-204ENST00000428021 ZNF415Q09FC8 603 aa11.67□□□□□ -0.54
VRK2-204ENST00000428021 TMEM183BQ1AE95 376 aa11.67□□□□□ -0.54
VRK2-204ENST00000428021 FAM159AQ6UWV7 190 aa11.67□□□□□ -0.54
VRK2-204ENST00000428021 PRNTQ86SH4 94 aa11.67□□□□□ -0.54
VRK2-204ENST00000428021 TMEM183AQ8IXX5 376 aa11.67□□□□□ -0.54
VRK2-204ENST00000428021 STOML3Q8TAV4 291 aa11.67□□□□□ -0.54
VRK2-204ENST00000428021 FAM213BQ8TBF2 198 aa11.67□□□□□ -0.54
VRK2-204ENST00000428021 NDFIP1Q9BT67 221 aa11.67□□□□□ -0.54
VRK2-204ENST00000428021 NKX6-2Q9C056 277 aaPredicted RBP11.67□□□□□ -0.54
VRK2-204ENST00000428021 FRAS1Q86XX4 4008 aa11.66□□□□□ -0.54
VRK2-204ENST00000428021 TRGV2A0A075B6R0 118 aa11.66□□□□□ -0.54
VRK2-204ENST00000428021 PEX7O00628 323 aa11.66□□□□□ -0.54
VRK2-204ENST00000428021 GNRH2O43555 120 aa11.66□□□□□ -0.54
VRK2-204ENST00000428021 IFNA7P01567 189 aa11.66□□□□□ -0.54
VRK2-204ENST00000428021 C1QBP02746 253 aa11.66□□□□□ -0.54
VRK2-204ENST00000428021 TPT1P13693 172 aaKnown RBP11.66□□□□□ -0.54
VRK2-204ENST00000428021 OR5I1Q13606 314 aa11.66□□□□□ -0.54
VRK2-204ENST00000428021 LGALS9BQ3B8N2 356 aa11.66□□□□□ -0.54
VRK2-204ENST00000428021 SFT2D1Q8WV19 159 aa11.66□□□□□ -0.54
VRK2-204ENST00000428021 MRPL16Q9NX20 251 aaKnown RBP11.66□□□□□ -0.54
VRK2-204ENST00000428021 C11orf21Q9P2W6 132 aa11.66□□□□□ -0.54
VRK2-204ENST00000428021 NAGKQ9UJ70 344 aa11.66□□□□□ -0.54
VRK2-204ENST00000428021 NACAE9PAV3 2078 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 64 ms