RNA–Protein interactions for RNA: ENST00000424478.5

PRPF39-202, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 2

Gene PRPF39, Length 3,174 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-202ENST00000424478 CA1P00915 261 aaPredicted RBP9.84□□□□□ -0.83
PRPF39-202ENST00000424478 RPL23P62829 140 aaKnown RBP9.84□□□□□ -0.83
PRPF39-202ENST00000424478 LINC01551Q86U37 167 aa9.84□□□□□ -0.83
PRPF39-202ENST00000424478 LINC00477Q96M19 166 aa9.84□□□□□ -0.83
PRPF39-202ENST00000424478 RBAKDNA6NC62 111 aa9.84□□□□□ -0.83
PRPF39-202ENST00000424478 C11orf21Q9P2W6 132 aa9.84□□□□□ -0.83
PRPF39-202ENST00000424478 TMEM241Q24JQ0 296 aa9.83□□□□□ -0.84
PRPF39-202ENST00000424478 NIPSNAP3BQ9BS92 247 aa9.83□□□□□ -0.84
PRPF39-202ENST00000424478 DUSP14O95147 198 aaKnown RBP9.83□□□□□ -0.84
PRPF39-202ENST00000424478 NDUFA5Q16718 116 aa9.83□□□□□ -0.84
PRPF39-202ENST00000424478 MLST8Q9BVC4 326 aa9.83□□□□□ -0.84
PRPF39-202ENST00000424478 RETNQ9HD89 108 aa9.83□□□□□ -0.84
PRPF39-202ENST00000424478 FRMD6-AS1P0C7T7 363 aa9.83□□□□□ -0.84
PRPF39-202ENST00000424478 SSTP61278 116 aa9.83□□□□□ -0.84
PRPF39-202ENST00000424478 FAM19A4Q96LR4 140 aa9.83□□□□□ -0.84
PRPF39-202ENST00000424478 SMDT1Q9H4I9 107 aa9.83□□□□□ -0.84
PRPF39-202ENST00000424478 GZMBP10144 247 aa9.82□□□□□ -0.84
PRPF39-202ENST00000424478 CDKN1BP46527 198 aa9.82□□□□□ -0.84
PRPF39-202ENST00000424478 TAS2R60P59551 318 aa9.82□□□□□ -0.84
PRPF39-202ENST00000424478 DEFB135Q30KP9 77 aa9.82□□□□□ -0.84
PRPF39-202ENST00000424478 TMEM183AQ8IXX5 376 aa9.82□□□□□ -0.84
PRPF39-202ENST00000424478 TCEAL7Q9BRU2 100 aa9.82□□□□□ -0.84
PRPF39-202ENST00000424478 SDF2L1Q9HCN8 221 aa9.82□□□□□ -0.84
PRPF39-202ENST00000424478 ATRAIDQ6UW56 229 aa9.82□□□□□ -0.84
PRPF39-202ENST00000424478 NDFIP1Q9BT67 221 aa9.82□□□□□ -0.84
PRPF39-202ENST00000424478 SH2D1AO60880 128 aa9.81□□□□□ -0.84
PRPF39-202ENST00000424478 NAT8Q9UHE5 227 aa9.81□□□□□ -0.84
PRPF39-202ENST00000424478 TP53TG3Q9ULZ0 132 aa9.81□□□□□ -0.84
PRPF39-202ENST00000424478 SERTM2A0A1B0GWG4 89 aa9.81□□□□□ -0.84
PRPF39-202ENST00000424478 SMUG1Q53HV7 270 aa9.81□□□□□ -0.84
PRPF39-202ENST00000424478 SEC11CQ9BY50 192 aa9.81□□□□□ -0.84
PRPF39-202ENST00000424478 TGP01266 2768 aa9.81□□□□□ -0.84
PRPF39-202ENST00000424478 FAM110AQ9BQ89 295 aa9.81□□□□□ -0.84
PRPF39-202ENST00000424478 LOC102724200A0A096LPH7 203 aaPredicted RBP9.8□□□□□ -0.84
PRPF39-202ENST00000424478 MUC21A0A0G2JKD1 596 aa9.8□□□□□ -0.84
PRPF39-202ENST00000424478 MUC21A0A140T8X8 626 aa9.8□□□□□ -0.84
PRPF39-202ENST00000424478 GRIFINA4D1Z8 144 aa9.8□□□□□ -0.84
PRPF39-202ENST00000424478 C9JCJ5 164 aa9.8□□□□□ -0.84
PRPF39-202ENST00000424478 ZFP30Q9Y2G7 519 aa9.8□□□□□ -0.84
PRPF39-202ENST00000424478 KLLNB2CW77 178 aa9.8□□□□□ -0.84
PRPF39-202ENST00000424478 SAPCD1Q5SSQ6 148 aa9.8□□□□□ -0.84
PRPF39-202ENST00000424478 ERVFC1-1P60608 527 aa9.79□□□□□ -0.84
PRPF39-202ENST00000424478 KPRPQ5T749 579 aaPredicted RBP9.79□□□□□ -0.84
PRPF39-202ENST00000424478 ARL6IP6Q8N6S5 226 aa9.79□□□□□ -0.84
PRPF39-202ENST00000424478 CSTL1Q9H114 145 aa9.79□□□□□ -0.84
PRPF39-202ENST00000424478 TIMM8BQ9Y5J9 83 aaPredicted RBP9.79□□□□□ -0.84
PRPF39-202ENST00000424478 C7orf71A4D174 169 aa9.79□□□□□ -0.84
PRPF39-202ENST00000424478 SCO1O75880 301 aa9.79□□□□□ -0.84
PRPF39-202ENST00000424478 ORM1P02763 201 aa9.79□□□□□ -0.84
PRPF39-202ENST00000424478 CMC4P56277 68 aaPredicted RBP9.79□□□□□ -0.84
PRPF39-202ENST00000424478 DEFA6Q01524 100 aa9.79□□□□□ -0.84
PRPF39-202ENST00000424478 C1orf158Q8N1D5 194 aa9.79□□□□□ -0.84
PRPF39-202ENST00000424478 FBN3Q75N90 2809 aa9.79□□□□□ -0.84
PRPF39-202ENST00000424478 DEFB4AO15263 64 aa9.79□□□□□ -0.84
PRPF39-202ENST00000424478 CRISP2P16562 243 aa9.79□□□□□ -0.84
PRPF39-202ENST00000424478 NUDT10Q8NFP7 164 aa9.79□□□□□ -0.84
PRPF39-202ENST00000424478 ISOC2Q96AB3 205 aa9.79□□□□□ -0.84
PRPF39-202ENST00000424478 NUDT11Q96G61 164 aa9.79□□□□□ -0.84
PRPF39-202ENST00000424478 TMEM208Q9BTX3 173 aa9.79□□□□□ -0.84
PRPF39-202ENST00000424478 A8MTW9 85 aa9.78□□□□□ -0.84
PRPF39-202ENST00000424478 GNRH2O43555 120 aa9.78□□□□□ -0.84
PRPF39-202ENST00000424478 LEPP41159 167 aa9.78□□□□□ -0.84
PRPF39-202ENST00000424478 TCL1AP56279 114 aa9.78□□□□□ -0.84
PRPF39-202ENST00000424478 ZNF705GA8MUZ8 300 aaPredicted RBP9.78□□□□□ -0.84
PRPF39-202ENST00000424478 ZNF324O75467 553 aaPredicted RBP9.78□□□□□ -0.84
PRPF39-202ENST00000424478 ANXA2RQ3ZCQ2 193 aa9.78□□□□□ -0.84
PRPF39-202ENST00000424478 RNF212Q495C1 297 aa9.78□□□□□ -0.84
PRPF39-202ENST00000424478 C10orf91Q5T1B1 145 aa9.78□□□□□ -0.84
PRPF39-202ENST00000424478 STAB2Q8WWQ8 2551 aa9.78□□□□□ -0.84
PRPF39-202ENST00000424478 IGKV3D-20A0A0C4DH25 116 aa9.77□□□□□ -0.84
PRPF39-202ENST00000424478 S100A9P06702 114 aaKnown RBP9.77□□□□□ -0.84
PRPF39-202ENST00000424478 PFN1P07737 140 aaKnown RBP9.77□□□□□ -0.84
PRPF39-202ENST00000424478 AZU1P20160 251 aa9.77□□□□□ -0.84
PRPF39-202ENST00000424478 IBA57Q5T440 356 aaKnown RBP9.77□□□□□ -0.84
PRPF39-202ENST00000424478 FAM162BQ5T6X4 162 aa9.77□□□□□ -0.84
PRPF39-202ENST00000424478 SBSPONQ8IVN8 264 aa9.77□□□□□ -0.84
PRPF39-202ENST00000424478 CARHSP1Q9Y2V2 147 aaKnown RBP9.77□□□□□ -0.84
PRPF39-202ENST00000424478 NUTF2P61970 127 aaKnown RBP9.77□□□□□ -0.85
PRPF39-202ENST00000424478 FAM74A3Q4VXF1 159 aa9.77□□□□□ -0.85
PRPF39-202ENST00000424478 ZNF575Q86XF7 245 aa9.77□□□□□ -0.85
PRPF39-202ENST00000424478 LINC01587Q99440 93 aa9.77□□□□□ -0.85
PRPF39-202ENST00000424478 TPPP3Q9BW30 176 aa9.77□□□□□ -0.85
PRPF39-202ENST00000424478 TRBV6-1A0A0K0K1D8 114 aa9.77□□□□□ -0.85
PRPF39-202ENST00000424478 KRBOX1C9JBD0 128 aa9.77□□□□□ -0.85
PRPF39-202ENST00000424478 CSNK1G2-AS1Q8NCQ2 148 aa9.77□□□□□ -0.85
PRPF39-202ENST00000424478 SFRP2Q96HF1 295 aa9.77□□□□□ -0.85
PRPF39-202ENST00000424478 HUWE1Q7Z6Z7 4374 aaKnown RBP9.77□□□□□ -0.85
PRPF39-202ENST00000424478 TSPOP30536 169 aa9.76□□□□□ -0.85
PRPF39-202ENST00000424478 OR2D3Q8NGH3 330 aa9.76□□□□□ -0.85
PRPF39-202ENST00000424478 DNAH9Q9NYC9 4486 aa9.76□□□□□ -0.85
PRPF39-202ENST00000424478 INSP01308 110 aa9.76□□□□□ -0.85
PRPF39-202ENST00000424478 EMP1P54849 157 aa9.76□□□□□ -0.85
PRPF39-202ENST00000424478 CLRN3Q8NCR9 226 aa9.76□□□□□ -0.85
PRPF39-202ENST00000424478 DAZAP1Q96EP5 407 aaKnown RBP9.76□□□□□ -0.85
PRPF39-202ENST00000424478 RPS10P5Q9NQ39 176 aa9.76□□□□□ -0.85
PRPF39-202ENST00000424478 C19orf71A6NCJ1 209 aa9.75□□□□□ -0.85
PRPF39-202ENST00000424478 FABP5P3A8MUU1 101 aa9.75□□□□□ -0.85
PRPF39-202ENST00000424478 SPINK4O60575 86 aa9.75□□□□□ -0.85
PRPF39-202ENST00000424478 C7orf77A4D0Y5 90 aa9.75□□□□□ -0.85
PRPF39-202ENST00000424478 P01737 135 aa9.75□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 87.1 ms