RNA–Protein interactions for RNA: ENST00000423941.5

HDAC6-205, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 583 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-205ENST00000423941 PMS2P11Q13670 270 aa13.17□□□□□ -0.3
HDAC6-205ENST00000423941 CEMP1Q6PRD7 247 aaPredicted RBP13.17□□□□□ -0.3
HDAC6-205ENST00000423941 Q6ZQT7 251 aa13.17□□□□□ -0.3
HDAC6-205ENST00000423941 TMEM75Q8N9X5 138 aa13.17□□□□□ -0.3
HDAC6-205ENST00000423941 TMEM263Q8WUH6 116 aaKnown RBP13.17□□□□□ -0.3
HDAC6-205ENST00000423941 PHLDA1Q8WV24 401 aaPredicted RBP13.17□□□□□ -0.3
HDAC6-205ENST00000423941 HIST1H2BAQ96A08 127 aa13.17□□□□□ -0.3
HDAC6-205ENST00000423941 C16orf74Q96GX8 76 aa13.17□□□□□ -0.3
HDAC6-205ENST00000423941 TCEAL7Q9BRU2 100 aa13.17□□□□□ -0.3
HDAC6-205ENST00000423941 CCL20P78556 96 aa13.16□□□□□ -0.3
HDAC6-205ENST00000423941 ANXA2RQ3ZCQ2 193 aa13.16□□□□□ -0.3
HDAC6-205ENST00000423941 FAM222AQ5U5X8 452 aa13.16□□□□□ -0.3
HDAC6-205ENST00000423941 KLF12Q9Y4X4 402 aa13.16□□□□□ -0.3
HDAC6-205ENST00000423941 NUPR2A6NF83 97 aa13.15□□□□□ -0.3
HDAC6-205ENST00000423941 PAGE4O60829 102 aa13.15□□□□□ -0.3
HDAC6-205ENST00000423941 PPT1P50897 306 aa13.15□□□□□ -0.3
HDAC6-205ENST00000423941 EMP1P54849 157 aa13.15□□□□□ -0.3
HDAC6-205ENST00000423941 FLI1Q01543 452 aaPredicted RBP13.15□□□□□ -0.3
HDAC6-205ENST00000423941 PSG8Q9UQ74 426 aa13.15□□□□□ -0.3
HDAC6-205ENST00000423941 BOLA1Q9Y3E2 137 aa13.15□□□□□ -0.3
HDAC6-205ENST00000423941 LYRM9A8MSI8 78 aa13.14□□□□□ -0.31
HDAC6-205ENST00000423941 C11orf94C9JXX5 98 aa13.14□□□□□ -0.31
HDAC6-205ENST00000423941 PEX7O00628 323 aa13.14□□□□□ -0.31
HDAC6-205ENST00000423941 IFNA7P01567 189 aa13.14□□□□□ -0.31
HDAC6-205ENST00000423941 Q6ZTC4 211 aa13.14□□□□□ -0.31
HDAC6-205ENST00000423941 SGK494Q96LW2 274 aa13.14□□□□□ -0.31
HDAC6-205ENST00000423941 LINC00479Q96M42 142 aa13.14□□□□□ -0.31
HDAC6-205ENST00000423941 TREM1Q9NP99 234 aa13.14□□□□□ -0.31
HDAC6-205ENST00000423941 HTN1P15515 57 aa13.13□□□□□ -0.31
HDAC6-205ENST00000423941 ATP5G3P48201 142 aa13.13□□□□□ -0.31
HDAC6-205ENST00000423941 COX8CQ7Z4L0 72 aa13.13□□□□□ -0.31
HDAC6-205ENST00000423941 EIF4E3Q8N5X7 224 aaKnown RBP13.13□□□□□ -0.31
HDAC6-205ENST00000423941 LINC00612Q8N6U2 182 aa13.13□□□□□ -0.31
HDAC6-205ENST00000423941 C11orf72Q8NBR9 251 aa13.13□□□□□ -0.31
HDAC6-205ENST00000423941 TIMM8BQ9Y5J9 83 aaPredicted RBP13.13□□□□□ -0.31
HDAC6-205ENST00000423941 TRBV6-1A0A0K0K1D8 114 aa13.12□□□□□ -0.31
HDAC6-205ENST00000423941 DAZ2Q13117 558 aaKnown RBP13.12□□□□□ -0.31
HDAC6-205ENST00000423941 TDRG1Q3Y452 100 aa13.12□□□□□ -0.31
HDAC6-205ENST00000423941 SAPCD1Q5SSQ6 148 aa13.12□□□□□ -0.31
HDAC6-205ENST00000423941 CST9LP1Q5W188 147 aa13.12□□□□□ -0.31
HDAC6-205ENST00000423941 IGHV1OR15-1A0A075B7D0 117 aa13.11□□□□□ -0.31
HDAC6-205ENST00000423941 TRAV10A0A0B4J240 114 aa13.11□□□□□ -0.31
HDAC6-205ENST00000423941 TRAV34A0A0B4J273 112 aa13.11□□□□□ -0.31
HDAC6-205ENST00000423941 A0A1B0GV50 99 aa13.11□□□□□ -0.31
HDAC6-205ENST00000423941 F6UZH7 168 aa13.11□□□□□ -0.31
HDAC6-205ENST00000423941 IBA57Q5T440 356 aaKnown RBP13.11□□□□□ -0.31
HDAC6-205ENST00000423941 ALKAL2Q6UX46 152 aa13.11□□□□□ -0.31
HDAC6-205ENST00000423941 C8orf49Q96NF6 230 aa13.11□□□□□ -0.31
HDAC6-205ENST00000423941 MANBALQ9NQG1 85 aa13.11□□□□□ -0.31
HDAC6-205ENST00000423941 TP53TG3Q9ULZ0 132 aa13.11□□□□□ -0.31
HDAC6-205ENST00000423941 TEX46H3BTG2 121 aa13.1□□□□□ -0.31
HDAC6-205ENST00000423941 ZNF80P51504 273 aaPredicted RBP13.1□□□□□ -0.31
HDAC6-205ENST00000423941 ZNF767PQ75MW2 155 aa13.1□□□□□ -0.31
HDAC6-205ENST00000423941 PRNTQ86SH4 94 aa13.1□□□□□ -0.31
HDAC6-205ENST00000423941 LYPD6BQ8NI32 183 aa13.1□□□□□ -0.31
HDAC6-205ENST00000423941 C2CD4CQ8TF44 421 aa13.1□□□□□ -0.31
HDAC6-205ENST00000423941 NDFIP1Q9BT67 221 aa13.1□□□□□ -0.31
HDAC6-205ENST00000423941 KLK5Q9Y337 293 aaPredicted RBP13.1□□□□□ -0.31
HDAC6-205ENST00000423941 DYNC2H1Q8NCM8 4307 aaKnown RBP13.09□□□□□ -0.31
HDAC6-205ENST00000423941 TRAV21A0A0B4J279 112 aa13.09□□□□□ -0.31
HDAC6-205ENST00000423941 RGS13O14921 159 aa13.09□□□□□ -0.31
HDAC6-205ENST00000423941 TMEM183BQ1AE95 376 aa13.09□□□□□ -0.31
HDAC6-205ENST00000423941 ZNF680Q8NEM1 530 aa13.09□□□□□ -0.31
HDAC6-205ENST00000423941 FMC1Q96HJ9 113 aa13.09□□□□□ -0.31
HDAC6-205ENST00000423941 TXNDC17Q9BRA2 123 aa13.09□□□□□ -0.31
HDAC6-205ENST00000423941 NOP10Q9NPE3 64 aaKnown RBP13.09□□□□□ -0.31
HDAC6-205ENST00000423941 ZFP30Q9Y2G7 519 aa13.09□□□□□ -0.31
HDAC6-205ENST00000423941 KMT2CQ8NEZ4 4911 aaKnown RBP13.09□□□□□ -0.31
HDAC6-205ENST00000423941 TCL1AP56279 114 aa13.08□□□□□ -0.32
HDAC6-205ENST00000423941 SMUG1Q53HV7 270 aa13.08□□□□□ -0.32
HDAC6-205ENST00000423941 Q86TA4 180 aa13.08□□□□□ -0.32
HDAC6-205ENST00000423941 GNG13Q9P2W3 67 aa13.08□□□□□ -0.32
HDAC6-205ENST00000423941 DEFB131BA0A096LNP1 70 aa13.07□□□□□ -0.32
HDAC6-205ENST00000423941 CBY3A6NI87 242 aa13.07□□□□□ -0.32
HDAC6-205ENST00000423941 TCTAP57738 103 aa13.07□□□□□ -0.32
HDAC6-205ENST00000423941 DAD1P61803 113 aa13.07□□□□□ -0.32
HDAC6-205ENST00000423941 BLOC1S1P78537 153 aa13.07□□□□□ -0.32
HDAC6-205ENST00000423941 C11orf52Q96A22 123 aa13.07□□□□□ -0.32
HDAC6-205ENST00000423941 GSN-AS1Q9NRJ2 163 aa13.07□□□□□ -0.32
HDAC6-205ENST00000423941 C11orf21Q9P2W6 132 aa13.07□□□□□ -0.32
HDAC6-205ENST00000423941 SCO2A0A1W2PP80 73 aa13.06□□□□□ -0.32
HDAC6-205ENST00000423941 SNURFLB1AK76 121 aa13.06□□□□□ -0.32
HDAC6-205ENST00000423941 GCGP01275 180 aa13.06□□□□□ -0.32
HDAC6-205ENST00000423941 LTAP01374 205 aa13.06□□□□□ -0.32
HDAC6-205ENST00000423941 S100A9P06702 114 aaKnown RBP13.06□□□□□ -0.32
HDAC6-205ENST00000423941 PFN1P07737 140 aaKnown RBP13.06□□□□□ -0.32
HDAC6-205ENST00000423941 MUC21Q5SSG8 566 aa13.06□□□□□ -0.32
HDAC6-205ENST00000423941 FAM159AQ6UWV7 190 aa13.06□□□□□ -0.32
HDAC6-205ENST00000423941 C18orf15Q96N68 181 aa13.06□□□□□ -0.32
HDAC6-205ENST00000423941 CRIP1P50238 77 aa13.05□□□□□ -0.32
HDAC6-205ENST00000423941 MDFICQ9P1T7 246 aa13.05□□□□□ -0.32
HDAC6-205ENST00000423941 SPINK4O60575 86 aa13.04□□□□□ -0.32
HDAC6-205ENST00000423941 DEFB130BP0DP73 79 aa13.04□□□□□ -0.32
HDAC6-205ENST00000423941 DEFB130AP0DP74 79 aa13.04□□□□□ -0.32
HDAC6-205ENST00000423941 AKR1C3P42330 323 aa13.04□□□□□ -0.32
HDAC6-205ENST00000423941 LGALS9BQ3B8N2 356 aa13.04□□□□□ -0.32
HDAC6-205ENST00000423941 KCNS1Q96KK3 526 aa13.04□□□□□ -0.32
HDAC6-205ENST00000423941 FAM210BQ96KR6 192 aa13.04□□□□□ -0.32
HDAC6-205ENST00000423941 MLST8Q9BVC4 326 aa13.04□□□□□ -0.32
HDAC6-205ENST00000423941 APLNQ9ULZ1 77 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms