RNA–Protein interactions for RNA: ENST00000423463.6

VPS13A-208, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

TSL 2

Gene VPS13A, Length 2,702 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-208ENST00000423463 CLINT1Q14677 625 aa1.79□□□□□ -2.12
VPS13A-208ENST00000423463 GUK1Q16774 197 aa1.79□□□□□ -2.12
VPS13A-208ENST00000423463 PSMG4Q5JS54 123 aa1.79□□□□□ -2.12
VPS13A-208ENST00000423463 LEMD1Q68G75 181 aa1.79□□□□□ -2.12
VPS13A-208ENST00000423463 EBLN2Q6P2I7 272 aa1.79□□□□□ -2.12
VPS13A-208ENST00000423463 FOXI2Q6ZQN5 318 aa1.79□□□□□ -2.12
VPS13A-208ENST00000423463 LINC00305Q7Z4B0 112 aa1.79□□□□□ -2.12
VPS13A-208ENST00000423463 BPIFA4PQ86YQ2 179 aa1.79□□□□□ -2.12
VPS13A-208ENST00000423463 LINC00052Q96N35 136 aa1.79□□□□□ -2.12
VPS13A-208ENST00000423463 SCRT1Q9BWW7 348 aa1.79□□□□□ -2.12
VPS13A-208ENST00000423463 NPCDR1Q9BY65 106 aa1.79□□□□□ -2.12
VPS13A-208ENST00000423463 SLC25A22Q9H936 323 aa1.79□□□□□ -2.12
VPS13A-208ENST00000423463 RPRMQ9NS64 109 aa1.79□□□□□ -2.12
VPS13A-208ENST00000423463 PXMP4Q9Y6I8 212 aa1.79□□□□□ -2.12
VPS13A-208ENST00000423463 A0A1B0GVY2 172 aa1.78□□□□□ -2.12
VPS13A-208ENST00000423463 KNCNA6PVL3 124 aa1.78□□□□□ -2.12
VPS13A-208ENST00000423463 H3BMM0 161 aa1.78□□□□□ -2.12
VPS13A-208ENST00000423463 MRPS12O15235 138 aaKnown RBP1.78□□□□□ -2.12
VPS13A-208ENST00000423463 DUSP14O95147 198 aaKnown RBP1.78□□□□□ -2.12
VPS13A-208ENST00000423463 HIST1H1EP10412 219 aaKnown RBP1.78□□□□□ -2.12
VPS13A-208ENST00000423463 Q5BKY6 102 aa1.78□□□□□ -2.12
VPS13A-208ENST00000423463 ACTL10Q5JWF8 245 aa1.78□□□□□ -2.12
VPS13A-208ENST00000423463 LCN15Q6UWW0 184 aa1.78□□□□□ -2.12
VPS13A-208ENST00000423463 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa1.78□□□□□ -2.12
VPS13A-208ENST00000423463 INO80EQ8NBZ0 244 aaPredicted RBP1.78□□□□□ -2.12
VPS13A-208ENST00000423463 OR2T35Q8NGX2 323 aa1.78□□□□□ -2.12
VPS13A-208ENST00000423463 LRRC20Q8TCA0 184 aa1.78□□□□□ -2.12
VPS13A-208ENST00000423463 AQP10Q96PS8 301 aa1.78□□□□□ -2.12
VPS13A-208ENST00000423463 SLC50A1Q9BRV3 221 aa1.78□□□□□ -2.12
VPS13A-208ENST00000423463 MRPL32Q9BYC8 188 aaKnown RBP1.78□□□□□ -2.12
VPS13A-208ENST00000423463 WFDC1Q9HC57 220 aa1.78□□□□□ -2.12
VPS13A-208ENST00000423463 TMEM14CQ9P0S9 112 aa1.78□□□□□ -2.12
VPS13A-208ENST00000423463 TIMM9Q9Y5J7 89 aa1.78□□□□□ -2.12
VPS13A-208ENST00000423463 MEGF8Q7Z7M0 2845 aa1.78□□□□□ -2.12
VPS13A-208ENST00000423463 TRRAPQ9Y4A5 3859 aa1.78□□□□□ -2.12
VPS13A-208ENST00000423463 FXYD6-FXYD2A0A087WZ82 144 aa1.78□□□□□ -2.12
VPS13A-208ENST00000423463 BORCS7-ASMTA0A0B4J1R7 106 aa1.78□□□□□ -2.12
VPS13A-208ENST00000423463 TRAV8-2A0A0B4J237 113 aa1.78□□□□□ -2.12
VPS13A-208ENST00000423463 TRAV5A0A0B4J249 113 aa1.78□□□□□ -2.12
VPS13A-208ENST00000423463 A0A0J9YX75 114 aa1.78□□□□□ -2.12
VPS13A-208ENST00000423463 A8MTW9 85 aa1.78□□□□□ -2.12
VPS13A-208ENST00000423463 C3orf84H3BNL1 204 aa1.78□□□□□ -2.12
VPS13A-208ENST00000423463 TAAR5O14804 337 aa1.78□□□□□ -2.12
VPS13A-208ENST00000423463 ZNF253O75346 499 aa1.78□□□□□ -2.12
VPS13A-208ENST00000423463 HLA-DRB4P13762 266 aa1.78□□□□□ -2.12
VPS13A-208ENST00000423463 ZNF266Q14584 549 aa1.78□□□□□ -2.12
VPS13A-208ENST00000423463 PSG3Q16557 428 aa1.78□□□□□ -2.12
VPS13A-208ENST00000423463 ACOT6Q3I5F7 207 aaPredicted RBP1.78□□□□□ -2.12
VPS13A-208ENST00000423463 FAM78BQ5VT40 261 aa1.78□□□□□ -2.12
VPS13A-208ENST00000423463 RARRES2Q99969 163 aa1.78□□□□□ -2.12
VPS13A-208ENST00000423463 SMIM3Q9BZL3 60 aa1.78□□□□□ -2.12
VPS13A-208ENST00000423463 SAV1Q9H4B6 383 aaPredicted RBP1.78□□□□□ -2.12
VPS13A-208ENST00000423463 EDA2RQ9HAV5 297 aa1.78□□□□□ -2.12
VPS13A-208ENST00000423463 ZNF331Q9NQX6 463 aaPredicted RBP1.78□□□□□ -2.12
VPS13A-208ENST00000423463 TNFSF18Q9UNG2 199 aa1.78□□□□□ -2.12
VPS13A-208ENST00000423463 FUT9Q9Y231 359 aa1.78□□□□□ -2.12
VPS13A-208ENST00000423463 PRELID1Q9Y255 219 aa1.78□□□□□ -2.12
VPS13A-208ENST00000423463 HLA-DRB4X5D2U9 266 aa1.78□□□□□ -2.12
VPS13A-208ENST00000423463 IGLV4-3A0A075B6K6 122 aa1.77□□□□□ -2.13
VPS13A-208ENST00000423463 A0A0U1RRA0 63 aa1.77□□□□□ -2.13
VPS13A-208ENST00000423463 H3BQ15 152 aa1.77□□□□□ -2.13
VPS13A-208ENST00000423463 CA1P00915 261 aaPredicted RBP1.77□□□□□ -2.13
VPS13A-208ENST00000423463 MBP02144 154 aa1.77□□□□□ -2.13
VPS13A-208ENST00000423463 GIG44P09565 113 aaPredicted RBP1.77□□□□□ -2.13
VPS13A-208ENST00000423463 NBEAP1P0C6P0 100 aa1.77□□□□□ -2.13
VPS13A-208ENST00000423463 IGLC2P0DOY2 106 aa1.77□□□□□ -2.13
VPS13A-208ENST00000423463 M6PRP20645 277 aa1.77□□□□□ -2.13
VPS13A-208ENST00000423463 TAS2R45P59539 299 aa1.77□□□□□ -2.13
VPS13A-208ENST00000423463 RHOBP62745 196 aa1.77□□□□□ -2.13
VPS13A-208ENST00000423463 SERF2P84101 59 aa1.77□□□□□ -2.13
VPS13A-208ENST00000423463 PSG9Q00887 426 aa1.77□□□□□ -2.13
VPS13A-208ENST00000423463 PDE6HQ13956 83 aa1.77□□□□□ -2.13
VPS13A-208ENST00000423463 DEFB135Q30KP9 77 aa1.77□□□□□ -2.13
VPS13A-208ENST00000423463 KRTAP20-1Q3LI63 56 aa1.77□□□□□ -2.13
VPS13A-208ENST00000423463 FAM159AQ6UWV7 190 aa1.77□□□□□ -2.13
VPS13A-208ENST00000423463 MIR17HGQ75NE6 70 aa1.77□□□□□ -2.13
VPS13A-208ENST00000423463 ZNF738Q8NE65 137 aa1.77□□□□□ -2.13
VPS13A-208ENST00000423463 OR8A1Q8NGG7 326 aa1.77□□□□□ -2.13
VPS13A-208ENST00000423463 OR11H2Q8NH07 326 aa1.77□□□□□ -2.13
VPS13A-208ENST00000423463 MUC7Q8TAX7 377 aa1.77□□□□□ -2.13
VPS13A-208ENST00000423463 PCNPQ8WW12 178 aaKnown RBP1.77□□□□□ -2.13
VPS13A-208ENST00000423463 RPUSD4Q96CM3 377 aaKnown RBP1.77□□□□□ -2.13
VPS13A-208ENST00000423463 GNPNAT1Q96EK6 184 aaPredicted RBP1.77□□□□□ -2.13
VPS13A-208ENST00000423463 FAM167A-AS1Q96KT0 104 aa1.77□□□□□ -2.13
VPS13A-208ENST00000423463 PSMG3Q9BT73 122 aaPredicted RBP1.77□□□□□ -2.13
VPS13A-208ENST00000423463 OR51M1Q9H341 326 aa1.77□□□□□ -2.13
VPS13A-208ENST00000423463 RETNQ9HD89 108 aa1.77□□□□□ -2.13
VPS13A-208ENST00000423463 TRBV19A0A075B6N1 114 aa1.77□□□□□ -2.13
VPS13A-208ENST00000423463 A0A1W2PPV4 95 aa1.77□□□□□ -2.13
VPS13A-208ENST00000423463 RNF222A6NCQ9 220 aa1.77□□□□□ -2.13
VPS13A-208ENST00000423463 SMIM9A6NGZ8 99 aa1.77□□□□□ -2.13
VPS13A-208ENST00000423463 HMSDA8MTL9 139 aa1.77□□□□□ -2.13
VPS13A-208ENST00000423463 F6UB75 175 aa1.77□□□□□ -2.13
VPS13A-208ENST00000423463 G3V3Q6 166 aa1.77□□□□□ -2.13
VPS13A-208ENST00000423463 MIFP14174 115 aa1.77□□□□□ -2.13
VPS13A-208ENST00000423463 GCSAMLQ5JQS6 135 aa1.77□□□□□ -2.13
VPS13A-208ENST00000423463 LYPD1Q8N2G4 141 aa1.77□□□□□ -2.13
VPS13A-208ENST00000423463 RNF182Q8N6D2 247 aa1.77□□□□□ -2.13
VPS13A-208ENST00000423463 HSD17B11Q8NBQ5 300 aa1.77□□□□□ -2.13
VPS13A-208ENST00000423463 CSNK1G2-AS1Q8NCQ2 148 aa1.77□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 67.9 ms