RNA–Protein interactions for RNA: ENST00000421827.2

UBXN11-208, Transcript of UBX domain protein 11, humanhuman

TSL 5

Gene UBXN11, Length 728 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN11-208ENST00000421827 ARL14EPLP0DKL9 152 aa12.63□□□□□ -0.39
UBXN11-208ENST00000421827 TCL1AP56279 114 aa12.63□□□□□ -0.39
UBXN11-208ENST00000421827 IBA57Q5T440 356 aaKnown RBP12.63□□□□□ -0.39
UBXN11-208ENST00000421827 ARL6IP6Q8N6S5 226 aa12.63□□□□□ -0.39
UBXN11-208ENST00000421827 TMED6Q8WW62 240 aa12.63□□□□□ -0.39
UBXN11-208ENST00000421827 RAB24Q969Q5 203 aa12.63□□□□□ -0.39
UBXN11-208ENST00000421827 RPH3ALQ9UNE2 315 aa12.63□□□□□ -0.39
UBXN11-208ENST00000421827 TNFSF18Q9UNG2 199 aa12.63□□□□□ -0.39
UBXN11-208ENST00000421827 TRAV26-1A0A087WT03 109 aa12.62□□□□□ -0.39
UBXN11-208ENST00000421827 TRGV1A0A0A0MS02 117 aa12.62□□□□□ -0.39
UBXN11-208ENST00000421827 HOXA5P20719 270 aa12.62□□□□□ -0.39
UBXN11-208ENST00000421827 LINC00336Q6ZUF6 198 aa12.62□□□□□ -0.39
UBXN11-208ENST00000421827 GNPNAT1Q96EK6 184 aaPredicted RBP12.62□□□□□ -0.39
UBXN11-208ENST00000421827 ARPC5LQ9BPX5 153 aa12.62□□□□□ -0.39
UBXN11-208ENST00000421827 SH3BGRL3Q9H299 93 aa12.62□□□□□ -0.39
UBXN11-208ENST00000421827 TMPRSS5Q9H3S3 457 aa12.62□□□□□ -0.39
UBXN11-208ENST00000421827 TP53TG3Q9ULZ0 132 aa12.62□□□□□ -0.39
UBXN11-208ENST00000421827 KLF12Q9Y4X4 402 aa12.62□□□□□ -0.39
UBXN11-208ENST00000421827 DNAH17Q9UFH2 4485 aa12.62□□□□□ -0.39
UBXN11-208ENST00000421827 TRGV2A0A075B6R0 118 aa12.61□□□□□ -0.39
UBXN11-208ENST00000421827 BORCS7-ASMTA0A0B4J1R7 106 aa12.61□□□□□ -0.39
UBXN11-208ENST00000421827 SPINK4O60575 86 aa12.61□□□□□ -0.39
UBXN11-208ENST00000421827 RPL7L1Q6DKI1 246 aaKnown RBP12.61□□□□□ -0.39
UBXN11-208ENST00000421827 Q6ZR54 194 aa12.61□□□□□ -0.39
UBXN11-208ENST00000421827 GOLT1AQ6ZVE7 132 aa12.61□□□□□ -0.39
UBXN11-208ENST00000421827 C18orf15Q96N68 181 aa12.61□□□□□ -0.39
UBXN11-208ENST00000421827 NACAE9PAV3 2078 aa12.61□□□□□ -0.39
UBXN11-208ENST00000421827 A0A0J9YY99 117 aa12.6□□□□□ -0.39
UBXN11-208ENST00000421827 GCHFRP30047 84 aa12.6□□□□□ -0.39
UBXN11-208ENST00000421827 CCL18P55774 89 aa12.6□□□□□ -0.39
UBXN11-208ENST00000421827 Q6AWC8 147 aa12.6□□□□□ -0.39
UBXN11-208ENST00000421827 ST6GAL2Q96JF0 529 aa12.6□□□□□ -0.39
UBXN11-208ENST00000421827 MUC21Q5SSG8 566 aa12.59□□□□□ -0.39
UBXN11-208ENST00000421827 SUN5Q8TC36 379 aa12.59□□□□□ -0.39
UBXN11-208ENST00000421827 ACTR3CQ9C0K3 210 aaPredicted RBP12.59□□□□□ -0.39
UBXN11-208ENST00000421827 G3V3Q6 166 aa12.58□□□□□ -0.4
UBXN11-208ENST00000421827 H3BNG1 76 aa12.58□□□□□ -0.4
UBXN11-208ENST00000421827 RTL8CO15255 209 aa12.58□□□□□ -0.4
UBXN11-208ENST00000421827 GNG5P63218 68 aa12.58□□□□□ -0.4
UBXN11-208ENST00000421827 ZNF415Q09FC8 603 aa12.58□□□□□ -0.4
UBXN11-208ENST00000421827 LINC00588Q9Y4M8 146 aa12.58□□□□□ -0.4
UBXN11-208ENST00000421827 FAT2Q9NYQ8 4349 aa12.58□□□□□ -0.4
UBXN11-208ENST00000421827 TRAV8-1A0A0A6YYK1 113 aa12.57□□□□□ -0.4
UBXN11-208ENST00000421827 CXorf1O96002 111 aa12.57□□□□□ -0.4
UBXN11-208ENST00000421827 FAM159AQ6UWV7 190 aa12.57□□□□□ -0.4
UBXN11-208ENST00000421827 ZNRF2Q8NHG8 242 aa12.57□□□□□ -0.4
UBXN11-208ENST00000421827 TMEM167BQ9NRX6 74 aa12.57□□□□□ -0.4
UBXN11-208ENST00000421827 MRPL16Q9NX20 251 aaKnown RBP12.57□□□□□ -0.4
UBXN11-208ENST00000421827 SERTM2A0A1B0GWG4 89 aa12.56□□□□□ -0.4
UBXN11-208ENST00000421827 SSX7Q7RTT5 188 aa12.56□□□□□ -0.4
UBXN11-208ENST00000421827 C5orf17Q8NAS9 161 aa12.56□□□□□ -0.4
UBXN11-208ENST00000421827 TREM1Q9NP99 234 aa12.56□□□□□ -0.4
UBXN11-208ENST00000421827 MDFICQ9P1T7 246 aa12.56□□□□□ -0.4
UBXN11-208ENST00000421827 TRGV11A0A075B6L2 103 aa12.55□□□□□ -0.4
UBXN11-208ENST00000421827 ARPC5O15511 151 aa12.55□□□□□ -0.4
UBXN11-208ENST00000421827 TMEM183BQ1AE95 376 aa12.55□□□□□ -0.4
UBXN11-208ENST00000421827 TMEM183AQ8IXX5 376 aa12.55□□□□□ -0.4
UBXN11-208ENST00000421827 TVP23CQ96ET8 276 aa12.55□□□□□ -0.4
UBXN11-208ENST00000421827 MUC4Q99102 2169 aa12.54□□□□□ -0.4
UBXN11-208ENST00000421827 TRAV21A0A0B4J279 112 aa12.54□□□□□ -0.4
UBXN11-208ENST00000421827 PRSS29PA6NIE9 313 aa12.54□□□□□ -0.4
UBXN11-208ENST00000421827 F6UZH7 168 aa12.54□□□□□ -0.4
UBXN11-208ENST00000421827 TAAR5O14804 337 aa12.54□□□□□ -0.4
UBXN11-208ENST00000421827 TCRAP04437 139 aa12.54□□□□□ -0.4
UBXN11-208ENST00000421827 SUMO1P63165 101 aaKnown RBP12.54□□□□□ -0.4
UBXN11-208ENST00000421827 TDRG1Q3Y452 100 aa12.54□□□□□ -0.4
UBXN11-208ENST00000421827 SOHLH1Q5JUK2 328 aa12.54□□□□□ -0.4
UBXN11-208ENST00000421827 IQCF2Q8IXL9 164 aa12.54□□□□□ -0.4
UBXN11-208ENST00000421827 VSIG2Q96IQ7 327 aa12.54□□□□□ -0.4
UBXN11-208ENST00000421827 SGK494Q96LW2 274 aa12.54□□□□□ -0.4
UBXN11-208ENST00000421827 SPXQ9BT56 116 aa12.54□□□□□ -0.4
UBXN11-208ENST00000421827 NAGKQ9UJ70 344 aa12.54□□□□□ -0.4
UBXN11-208ENST00000421827 NBDYA0A0U1RRE5 68 aa12.53□□□□□ -0.4
UBXN11-208ENST00000421827 CTXND1A0A1B0GTU2 59 aa12.53□□□□□ -0.4
UBXN11-208ENST00000421827 K7EQM0 130 aa12.53□□□□□ -0.4
UBXN11-208ENST00000421827 IGHV3-53P01767 116 aa12.53□□□□□ -0.4
UBXN11-208ENST00000421827 ZNF726P1Q15940 193 aa12.53□□□□□ -0.4
UBXN11-208ENST00000421827 C1orf134Q5TEV5 83 aa12.53□□□□□ -0.4
UBXN11-208ENST00000421827 NDFIP1Q9BT67 221 aa12.53□□□□□ -0.4
UBXN11-208ENST00000421827 EPDR1Q9UM22 224 aa12.53□□□□□ -0.4
UBXN11-208ENST00000421827 A0A1B0GVY2 172 aa12.52□□□□□ -0.41
UBXN11-208ENST00000421827 A0A1W2PRE2 83 aa12.52□□□□□ -0.41
UBXN11-208ENST00000421827 GGTLC3B5MD39 225 aa12.52□□□□□ -0.41
UBXN11-208ENST00000421827 SMLR1H3BR10 107 aa12.52□□□□□ -0.41
UBXN11-208ENST00000421827 ESRGQ1W209 222 aa12.52□□□□□ -0.41
UBXN11-208ENST00000421827 AKR1C8PQ5T2L2 129 aa12.52□□□□□ -0.41
UBXN11-208ENST00000421827 CYTL1Q9NRR1 136 aa12.52□□□□□ -0.41
UBXN11-208ENST00000421827 A0A096LPF7 62 aa12.51□□□□□ -0.41
UBXN11-208ENST00000421827 GNRH2O43555 120 aa12.51□□□□□ -0.41
UBXN11-208ENST00000421827 SLAQ13239 276 aa12.51□□□□□ -0.41
UBXN11-208ENST00000421827 CYB561D1Q8N8Q1 229 aa12.51□□□□□ -0.41
UBXN11-208ENST00000421827 PSG8Q9UQ74 426 aa12.51□□□□□ -0.41
UBXN11-208ENST00000421827 PAX4O43316 350 aa12.5□□□□□ -0.41
UBXN11-208ENST00000421827 FLI1Q01543 452 aaPredicted RBP12.5□□□□□ -0.41
UBXN11-208ENST00000421827 RASL10AQ92737 203 aa12.5□□□□□ -0.41
UBXN11-208ENST00000421827 KCNS1Q96KK3 526 aa12.5□□□□□ -0.41
UBXN11-208ENST00000421827 Q9H8V8 135 aa12.5□□□□□ -0.41
UBXN11-208ENST00000421827 PRO0255Q9UI72 69 aa12.5□□□□□ -0.41
UBXN11-208ENST00000421827 IGHV3-16A0A0C4DH30 117 aa12.49□□□□□ -0.41
UBXN11-208ENST00000421827 IGLV2-11P01706 119 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms