RNA–Protein interactions for RNA: ENST00000419007.5

SEMA3B-203, Transcript of semaphorin 3B, humanhuman

TSL 2

Gene SEMA3B, Length 3,283 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-203ENST00000419007 IGHV7-81A0A0B4J1V7 117 aa11.75□□□□□ -0.53
SEMA3B-203ENST00000419007 ODF3BA8MYP8 253 aa11.75□□□□□ -0.53
SEMA3B-203ENST00000419007 J3KRW8 73 aa11.74□□□□□ -0.53
SEMA3B-203ENST00000419007 M0R1W7 72 aa11.74□□□□□ -0.53
SEMA3B-203ENST00000419007 CDSNQ15517 529 aa11.74□□□□□ -0.53
SEMA3B-203ENST00000419007 ZNF48Q96MX3 618 aaPredicted RBP11.74□□□□□ -0.53
SEMA3B-203ENST00000419007 SPCS1Q9Y6A9 102 aa11.74□□□□□ -0.53
SEMA3B-203ENST00000419007 TRAV26-2A0A0B4J265 109 aa11.74□□□□□ -0.53
SEMA3B-203ENST00000419007 FBLL1A6NHQ2 334 aaKnown RBP11.74□□□□□ -0.53
SEMA3B-203ENST00000419007 CLEC19AQ6UXS0 136 aa11.74□□□□□ -0.53
SEMA3B-203ENST00000419007 DTX2Q86UW9 622 aa11.74□□□□□ -0.53
SEMA3B-203ENST00000419007 TMEM160Q9NX00 188 aa11.74□□□□□ -0.53
SEMA3B-203ENST00000419007 MAP1AP78559 2803 aaPredicted RBP11.74□□□□□ -0.53
SEMA3B-203ENST00000419007 K7EMI3 77 aa11.73□□□□□ -0.53
SEMA3B-203ENST00000419007 ZNF575Q86XF7 245 aa11.73□□□□□ -0.53
SEMA3B-203ENST00000419007 TRGV3P03979 118 aa11.73□□□□□ -0.53
SEMA3B-203ENST00000419007 FCER1GP30273 86 aa11.73□□□□□ -0.53
SEMA3B-203ENST00000419007 NXT2Q9NPJ8 142 aaKnown RBP11.73□□□□□ -0.53
SEMA3B-203ENST00000419007 K7EP34 96 aa11.72□□□□□ -0.53
SEMA3B-203ENST00000419007 ODF1Q14990 250 aa11.72□□□□□ -0.53
SEMA3B-203ENST00000419007 G3V318 75 aa11.72□□□□□ -0.53
SEMA3B-203ENST00000419007 ZC2HC1BQ5TFG8 222 aa11.72□□□□□ -0.53
SEMA3B-203ENST00000419007 COX8CQ7Z4L0 72 aa11.72□□□□□ -0.53
SEMA3B-203ENST00000419007 K7ERJ3 54 aa11.71□□□□□ -0.53
SEMA3B-203ENST00000419007 GOSR1O95249 250 aa11.71□□□□□ -0.53
SEMA3B-203ENST00000419007 IGKCP01834 107 aa11.71□□□□□ -0.53
SEMA3B-203ENST00000419007 FXYD2P54710 66 aa11.71□□□□□ -0.53
SEMA3B-203ENST00000419007 UFSP1Q6NVU6 142 aa11.71□□□□□ -0.53
SEMA3B-203ENST00000419007 Q6ZQT7 251 aa11.71□□□□□ -0.53
SEMA3B-203ENST00000419007 SIVA1O15304 175 aa11.71□□□□□ -0.53
SEMA3B-203ENST00000419007 ZFP36P26651 326 aaKnown RBP11.71□□□□□ -0.53
SEMA3B-203ENST00000419007 UCNP55089 124 aa11.71□□□□□ -0.53
SEMA3B-203ENST00000419007 AGPAT4-IT1Q9H0P7 198 aa11.71□□□□□ -0.53
SEMA3B-203ENST00000419007 IGKV3D-20A0A0C4DH25 116 aa11.71□□□□□ -0.54
SEMA3B-203ENST00000419007 A0A1W2PPM0 123 aa11.71□□□□□ -0.54
SEMA3B-203ENST00000419007 TMEM8BA6NDV4 472 aa11.71□□□□□ -0.54
SEMA3B-203ENST00000419007 ATP6V0E1O15342 81 aa11.71□□□□□ -0.54
SEMA3B-203ENST00000419007 BUB3O43684 328 aa11.71□□□□□ -0.54
SEMA3B-203ENST00000419007 SMIM13P0DJ93 91 aa11.71□□□□□ -0.54
SEMA3B-203ENST00000419007 FABP2P12104 132 aa11.71□□□□□ -0.54
SEMA3B-203ENST00000419007 TMEM78Q5T7P6 136 aa11.71□□□□□ -0.54
SEMA3B-203ENST00000419007 Q8N9W7 124 aa11.71□□□□□ -0.54
SEMA3B-203ENST00000419007 C11orf21Q9P2W6 132 aa11.71□□□□□ -0.54
SEMA3B-203ENST00000419007 USP24Q9UPU5 2620 aa11.7□□□□□ -0.54
SEMA3B-203ENST00000419007 TRAV40A0A0B4J280 105 aa11.7□□□□□ -0.54
SEMA3B-203ENST00000419007 SMIM17P0DL12 118 aa11.7□□□□□ -0.54
SEMA3B-203ENST00000419007 SPANXN1Q5VSR9 72 aa11.7□□□□□ -0.54
SEMA3B-203ENST00000419007 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa11.7□□□□□ -0.54
SEMA3B-203ENST00000419007 CHAC1Q9BUX1 264 aa11.7□□□□□ -0.54
SEMA3B-203ENST00000419007 CFAP46Q8IYW2 2715 aa11.7□□□□□ -0.54
SEMA3B-203ENST00000419007 SAMD5Q5TGI4 173 aa11.7□□□□□ -0.54
SEMA3B-203ENST00000419007 NHP2Q9NX24 153 aaKnown RBP11.7□□□□□ -0.54
SEMA3B-203ENST00000419007 HHLA3Q9XRX5 114 aa11.7□□□□□ -0.54
SEMA3B-203ENST00000419007 IGSF10Q6WRI0 2623 aa11.69□□□□□ -0.54
SEMA3B-203ENST00000419007 LINC01548A6NM66 108 aa11.69□□□□□ -0.54
SEMA3B-203ENST00000419007 SPRY2O43597 315 aa11.69□□□□□ -0.54
SEMA3B-203ENST00000419007 Q8N6K4 173 aa11.69□□□□□ -0.54
SEMA3B-203ENST00000419007 ZNF502Q8TBZ5 544 aa11.69□□□□□ -0.54
SEMA3B-203ENST00000419007 KLK15Q9H2R5 256 aa11.69□□□□□ -0.54
SEMA3B-203ENST00000419007 DPM2O94777 84 aa11.69□□□□□ -0.54
SEMA3B-203ENST00000419007 RPL24P83731 157 aaKnown RBP11.69□□□□□ -0.54
SEMA3B-203ENST00000419007 LINC01559Q495D7 138 aa11.69□□□□□ -0.54
SEMA3B-203ENST00000419007 Q5PR19 223 aa11.69□□□□□ -0.54
SEMA3B-203ENST00000419007 MYOZ3Q8TDC0 251 aa11.68□□□□□ -0.54
SEMA3B-203ENST00000419007 MRPL35Q9NZE8 188 aaKnown RBP11.68□□□□□ -0.54
SEMA3B-203ENST00000419007 LINC00527Q9UJ94 153 aa11.68□□□□□ -0.54
SEMA3B-203ENST00000419007 CNFNQ9BYD5 112 aa11.68□□□□□ -0.54
SEMA3B-203ENST00000419007 ZFAND3Q9H8U3 227 aa11.68□□□□□ -0.54
SEMA3B-203ENST00000419007 CHTOPQ9Y3Y2 248 aaKnown RBP11.68□□□□□ -0.54
SEMA3B-203ENST00000419007 AGRNO00468 2067 aa11.68□□□□□ -0.54
SEMA3B-203ENST00000419007 MYO18BQ8IUG5 2567 aa11.68□□□□□ -0.54
SEMA3B-203ENST00000419007 TRBV25-1A0A075B6N4 114 aa11.68□□□□□ -0.54
SEMA3B-203ENST00000419007 EFNA4P52798 201 aa11.68□□□□□ -0.54
SEMA3B-203ENST00000419007 CSTL1Q9H114 145 aa11.68□□□□□ -0.54
SEMA3B-203ENST00000419007 Q8N8P6 123 aa11.67□□□□□ -0.54
SEMA3B-203ENST00000419007 H3BVH4 76 aa11.67□□□□□ -0.54
SEMA3B-203ENST00000419007 SLC50A1Q9BRV3 221 aa11.67□□□□□ -0.54
SEMA3B-203ENST00000419007 FAM110DQ8TAY7 271 aaPredicted RBP11.66□□□□□ -0.54
SEMA3B-203ENST00000419007 METTL26Q96S19 204 aa11.66□□□□□ -0.54
SEMA3B-203ENST00000419007 MINOS1Q5TGZ0 78 aa11.66□□□□□ -0.54
SEMA3B-203ENST00000419007 C8orf86Q6ZUL3 223 aa11.66□□□□□ -0.54
SEMA3B-203ENST00000419007 CCDC140Q96MF4 163 aa11.66□□□□□ -0.54
SEMA3B-203ENST00000419007 HIF1ANQ9NWT6 349 aa11.66□□□□□ -0.54
SEMA3B-203ENST00000419007 MINOS1-NBL1R4GNA1 71 aa11.66□□□□□ -0.54
SEMA3B-203ENST00000419007 CELSR1Q9NYQ6 3014 aa11.66□□□□□ -0.54
SEMA3B-203ENST00000419007 ATP5LO75964 103 aa11.66□□□□□ -0.54
SEMA3B-203ENST00000419007 LAGE3Q14657 143 aa11.66□□□□□ -0.54
SEMA3B-203ENST00000419007 C1orf122Q6ZSJ8 110 aa11.66□□□□□ -0.54
SEMA3B-203ENST00000419007 RAB9AP51151 201 aa11.65□□□□□ -0.54
SEMA3B-203ENST00000419007 C16orf92Q96LL3 132 aa11.65□□□□□ -0.54
SEMA3B-203ENST00000419007 HIVEP3Q5T1R4 2406 aa11.65□□□□□ -0.54
SEMA3B-203ENST00000419007 CLPSL1A2RUU4 121 aa11.65□□□□□ -0.54
SEMA3B-203ENST00000419007 OOSP1A8MZH6 123 aa11.65□□□□□ -0.54
SEMA3B-203ENST00000419007 CIDEAO60543 219 aa11.65□□□□□ -0.54
SEMA3B-203ENST00000419007 SAA4P35542 130 aa11.65□□□□□ -0.54
SEMA3B-203ENST00000419007 SRSF2Q01130 221 aaKnown RBP11.65□□□□□ -0.54
SEMA3B-203ENST00000419007 M0R381 172 aa11.64□□□□□ -0.55
SEMA3B-203ENST00000419007 EBI3Q14213 229 aa11.64□□□□□ -0.55
SEMA3B-203ENST00000419007 TMEM219Q86XT9 240 aa11.64□□□□□ -0.55
SEMA3B-203ENST00000419007 OR5A1Q8NGJ0 315 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 77.1 ms