RNA–Protein interactions for RNA: ENST00000417656.6

SKA1-203, Transcript of spindle and kinetochore associated complex subunit 1, humanhuman

TSL 2 BASIC

Gene SKA1, Length 1,095 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA1-203ENST00000417656 F6UZH7 168 aa8.93□□□□□ -0.98
SKA1-203ENST00000417656 IFNA7P01567 189 aa8.93□□□□□ -0.98
SKA1-203ENST00000417656 ATP5G3P48201 142 aa8.93□□□□□ -0.98
SKA1-203ENST00000417656 RAB5CP51148 216 aa8.93□□□□□ -0.98
SKA1-203ENST00000417656 FAM222AQ5U5X8 452 aa8.93□□□□□ -0.98
SKA1-203ENST00000417656 Q6ZQT7 251 aa8.93□□□□□ -0.98
SKA1-203ENST00000417656 TVP23CQ96ET8 276 aa8.93□□□□□ -0.98
SKA1-203ENST00000417656 C16orf74Q96GX8 76 aa8.93□□□□□ -0.98
SKA1-203ENST00000417656 DKK2Q9UBU2 259 aa8.93□□□□□ -0.98
SKA1-203ENST00000417656 NUPR2A6NF83 97 aa8.92□□□□□ -0.98
SKA1-203ENST00000417656 K7EQM0 130 aa8.92□□□□□ -0.98
SKA1-203ENST00000417656 PEX7O00628 323 aa8.92□□□□□ -0.98
SKA1-203ENST00000417656 PAGE4O60829 102 aa8.92□□□□□ -0.98
SKA1-203ENST00000417656 ZNF324O75467 553 aaPredicted RBP8.92□□□□□ -0.98
SKA1-203ENST00000417656 SPART-AS1P0CW21 52 aa8.92□□□□□ -0.98
SKA1-203ENST00000417656 C12orf74Q32Q52 190 aa8.92□□□□□ -0.98
SKA1-203ENST00000417656 CST9LP1Q5W188 147 aa8.92□□□□□ -0.98
SKA1-203ENST00000417656 ALKAL2Q6UX46 152 aa8.92□□□□□ -0.98
SKA1-203ENST00000417656 Q6ZTC4 211 aa8.92□□□□□ -0.98
SKA1-203ENST00000417656 TMEM75Q8N9X5 138 aa8.92□□□□□ -0.98
SKA1-203ENST00000417656 RNASE8Q8TDE3 154 aaKnown RBP8.92□□□□□ -0.98
SKA1-203ENST00000417656 TMEM263Q8WUH6 116 aaKnown RBP8.92□□□□□ -0.98
SKA1-203ENST00000417656 PHLDA1Q8WV24 401 aaPredicted RBP8.92□□□□□ -0.98
SKA1-203ENST00000417656 PYGO2Q9BRQ0 406 aa8.92□□□□□ -0.98
SKA1-203ENST00000417656 PSG8Q9UQ74 426 aa8.92□□□□□ -0.98
SKA1-203ENST00000417656 LENEPQ9Y5L5 61 aa8.92□□□□□ -0.98
SKA1-203ENST00000417656 ARL2-SNX15V9GYD0 113 aa8.92□□□□□ -0.98
SKA1-203ENST00000417656 TRAV34A0A0B4J273 112 aa8.91□□□□□ -0.98
SKA1-203ENST00000417656 IGLV2-11P01706 119 aa8.91□□□□□ -0.98
SKA1-203ENST00000417656 FLI1Q01543 452 aaPredicted RBP8.91□□□□□ -0.98
SKA1-203ENST00000417656 PRNTQ86SH4 94 aa8.91□□□□□ -0.98
SKA1-203ENST00000417656 LINC00479Q96M42 142 aa8.91□□□□□ -0.98
SKA1-203ENST00000417656 FAM210AQ96ND0 272 aa8.91□□□□□ -0.98
SKA1-203ENST00000417656 C8orf49Q96NF6 230 aa8.91□□□□□ -0.98
SKA1-203ENST00000417656 NDFIP1Q9BT67 221 aa8.91□□□□□ -0.98
SKA1-203ENST00000417656 NKX6-2Q9C056 277 aaPredicted RBP8.91□□□□□ -0.98
SKA1-203ENST00000417656 TREM1Q9NP99 234 aa8.91□□□□□ -0.98
SKA1-203ENST00000417656 CSMD3Q7Z407 3707 aa8.91□□□□□ -0.98
SKA1-203ENST00000417656 TRAV1-1A0A0B4J248 108 aa8.9□□□□□ -0.98
SKA1-203ENST00000417656 TEX48A0A1B0GUV7 120 aa8.9□□□□□ -0.98
SKA1-203ENST00000417656 CBY3A6NI87 242 aa8.9□□□□□ -0.98
SKA1-203ENST00000417656 RGS13O14921 159 aa8.9□□□□□ -0.98
SKA1-203ENST00000417656 CCL20P78556 96 aa8.9□□□□□ -0.98
SKA1-203ENST00000417656 MUC21Q5SSG8 566 aa8.9□□□□□ -0.98
SKA1-203ENST00000417656 Q6AWC8 147 aa8.9□□□□□ -0.98
SKA1-203ENST00000417656 CEMP1Q6PRD7 247 aaPredicted RBP8.9□□□□□ -0.98
SKA1-203ENST00000417656 ZNF493Q6ZR52 646 aa8.9□□□□□ -0.98
SKA1-203ENST00000417656 Q86TA4 180 aa8.9□□□□□ -0.98
SKA1-203ENST00000417656 CCDC28AQ8IWP9 274 aa8.9□□□□□ -0.98
SKA1-203ENST00000417656 HIST1H2BAQ96A08 127 aa8.9□□□□□ -0.98
SKA1-203ENST00000417656 GNG13Q9P2W3 67 aa8.9□□□□□ -0.98
SKA1-203ENST00000417656 IGHV1OR15-1A0A075B7D0 117 aa8.89□□□□□ -0.99
SKA1-203ENST00000417656 AKR1C3P42330 323 aa8.89□□□□□ -0.99
SKA1-203ENST00000417656 PPT1P50897 306 aa8.89□□□□□ -0.99
SKA1-203ENST00000417656 EIF4E3Q8N5X7 224 aaKnown RBP8.89□□□□□ -0.99
SKA1-203ENST00000417656 LINC00467Q9BRT7 94 aa8.89□□□□□ -0.99
SKA1-203ENST00000417656 MANBALQ9NQG1 85 aa8.89□□□□□ -0.99
SKA1-203ENST00000417656 NAGKQ9UJ70 344 aa8.89□□□□□ -0.99
SKA1-203ENST00000417656 TP53TG3Q9ULZ0 132 aa8.89□□□□□ -0.99
SKA1-203ENST00000417656 TRAV10A0A0B4J240 114 aa8.88□□□□□ -0.99
SKA1-203ENST00000417656 SCO2A0A1W2PP80 73 aa8.88□□□□□ -0.99
SKA1-203ENST00000417656 FBLL1A6NHQ2 334 aaKnown RBP8.88□□□□□ -0.99
SKA1-203ENST00000417656 LYRM9A8MSI8 78 aa8.88□□□□□ -0.99
SKA1-203ENST00000417656 TEX46H3BTG2 121 aa8.88□□□□□ -0.99
SKA1-203ENST00000417656 DAD1P61803 113 aa8.88□□□□□ -0.99
SKA1-203ENST00000417656 C11orf72Q8NBR9 251 aa8.88□□□□□ -0.99
SKA1-203ENST00000417656 ZNF680Q8NEM1 530 aa8.88□□□□□ -0.99
SKA1-203ENST00000417656 TCEAL7Q9BRU2 100 aa8.88□□□□□ -0.99
SKA1-203ENST00000417656 NOP10Q9NPE3 64 aaKnown RBP8.88□□□□□ -0.99
SKA1-203ENST00000417656 KMT2CQ8NEZ4 4911 aaKnown RBP8.88□□□□□ -0.99
SKA1-203ENST00000417656 SNURFLB1AK76 121 aa8.87□□□□□ -0.99
SKA1-203ENST00000417656 C11orf94C9JXX5 98 aa8.87□□□□□ -0.99
SKA1-203ENST00000417656 GCGP01275 180 aa8.87□□□□□ -0.99
SKA1-203ENST00000417656 DEFB130BP0DP73 79 aa8.87□□□□□ -0.99
SKA1-203ENST00000417656 DEFB130AP0DP74 79 aa8.87□□□□□ -0.99
SKA1-203ENST00000417656 ZNF80P51504 273 aaPredicted RBP8.87□□□□□ -0.99
SKA1-203ENST00000417656 UBE2G1P62253 170 aa8.87□□□□□ -0.99
SKA1-203ENST00000417656 ANXA2RQ3ZCQ2 193 aa8.87□□□□□ -0.99
SKA1-203ENST00000417656 FMC1Q96HJ9 113 aa8.87□□□□□ -0.99
SKA1-203ENST00000417656 GSN-AS1Q9NRJ2 163 aa8.87□□□□□ -0.99
SKA1-203ENST00000417656 KLK5Q9Y337 293 aaPredicted RBP8.87□□□□□ -0.99
SKA1-203ENST00000417656 TIMM8BQ9Y5J9 83 aaPredicted RBP8.87□□□□□ -0.99
SKA1-203ENST00000417656 DYNC2H1Q8NCM8 4307 aaKnown RBP8.87□□□□□ -0.99
SKA1-203ENST00000417656 DEFB131BA0A096LNP1 70 aa8.86□□□□□ -0.99
SKA1-203ENST00000417656 TRAV21A0A0B4J279 112 aa8.86□□□□□ -0.99
SKA1-203ENST00000417656 HTN3P15516 51 aa8.86□□□□□ -0.99
SKA1-203ENST00000417656 TCL1AP56279 114 aa8.86□□□□□ -0.99
SKA1-203ENST00000417656 SMUG1Q53HV7 270 aa8.86□□□□□ -0.99
SKA1-203ENST00000417656 SAPCD1Q5SSQ6 148 aa8.86□□□□□ -0.99
SKA1-203ENST00000417656 FAM159AQ6UWV7 190 aa8.86□□□□□ -0.99
SKA1-203ENST00000417656 C2CD4CQ8TF44 421 aa8.86□□□□□ -0.99
SKA1-203ENST00000417656 PLECQ15149 4684 aaKnown RBP8.86□□□□□ -0.99
SKA1-203ENST00000417656 TENM2Q9NT68 2774 aa8.85□□□□□ -0.99
SKA1-203ENST00000417656 IFNA1P01562 189 aa8.85□□□□□ -0.99
SKA1-203ENST00000417656 BCL2P10415 239 aa8.85□□□□□ -0.99
SKA1-203ENST00000417656 ZNF415Q09FC8 603 aa8.85□□□□□ -0.99
SKA1-203ENST00000417656 TMEM183BQ1AE95 376 aa8.85□□□□□ -0.99
SKA1-203ENST00000417656 IBA57Q5T440 356 aaKnown RBP8.85□□□□□ -0.99
SKA1-203ENST00000417656 TMEM183AQ8IXX5 376 aa8.85□□□□□ -0.99
SKA1-203ENST00000417656 KLF12Q9Y4X4 402 aa8.85□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms