RNA–Protein interactions for RNA: ENST00000417137.5

SMARCB1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 3

Gene SMARCB1, Length 889 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-205ENST00000417137 TRAV8-1A0A0A6YYK1 113 aa16.55■□□□□ 0.24
SMARCB1-205ENST00000417137 TRAV1-1A0A0B4J248 108 aa16.55■□□□□ 0.24
SMARCB1-205ENST00000417137 FAM222AQ5U5X8 452 aa16.55■□□□□ 0.24
SMARCB1-205ENST00000417137 TMEM75Q8N9X5 138 aa16.55■□□□□ 0.24
SMARCB1-205ENST00000417137 TMEM263Q8WUH6 116 aaKnown RBP16.55■□□□□ 0.24
SMARCB1-205ENST00000417137 PHLDA1Q8WV24 401 aaPredicted RBP16.55■□□□□ 0.24
SMARCB1-205ENST00000417137 TREM1Q9NP99 234 aa16.55■□□□□ 0.24
SMARCB1-205ENST00000417137 DKK2Q9UBU2 259 aa16.55■□□□□ 0.24
SMARCB1-205ENST00000417137 CELA1Q9UNI1 258 aa16.55■□□□□ 0.24
SMARCB1-205ENST00000417137 C11orf94C9JXX5 98 aa16.54■□□□□ 0.24
SMARCB1-205ENST00000417137 PAGE4O60829 102 aa16.54■□□□□ 0.24
SMARCB1-205ENST00000417137 CEMP1Q6PRD7 247 aaPredicted RBP16.54■□□□□ 0.24
SMARCB1-205ENST00000417137 LINC00467Q9BRT7 94 aa16.54■□□□□ 0.24
SMARCB1-205ENST00000417137 PSG8Q9UQ74 426 aa16.54■□□□□ 0.24
SMARCB1-205ENST00000417137 KLK5Q9Y337 293 aaPredicted RBP16.54■□□□□ 0.24
SMARCB1-205ENST00000417137 LYRM9A8MSI8 78 aa16.53■□□□□ 0.24
SMARCB1-205ENST00000417137 PEX7O00628 323 aa16.53■□□□□ 0.24
SMARCB1-205ENST00000417137 RGS13O14921 159 aa16.53■□□□□ 0.24
SMARCB1-205ENST00000417137 FLI1Q01543 452 aaPredicted RBP16.53■□□□□ 0.24
SMARCB1-205ENST00000417137 SGK494Q96LW2 274 aa16.53■□□□□ 0.24
SMARCB1-205ENST00000417137 C12orf74Q32Q52 190 aa16.52■□□□□ 0.24
SMARCB1-205ENST00000417137 SAPCD1Q5SSQ6 148 aa16.52■□□□□ 0.24
SMARCB1-205ENST00000417137 PRR9Q5T870 116 aa16.52■□□□□ 0.24
SMARCB1-205ENST00000417137 EIF4E3Q8N5X7 224 aaKnown RBP16.52■□□□□ 0.24
SMARCB1-205ENST00000417137 RNASE8Q8TDE3 154 aaKnown RBP16.52■□□□□ 0.24
SMARCB1-205ENST00000417137 TIMM8BQ9Y5J9 83 aaPredicted RBP16.52■□□□□ 0.24
SMARCB1-205ENST00000417137 CBY3A6NI87 242 aa16.51■□□□□ 0.23
SMARCB1-205ENST00000417137 Q6AWC8 147 aa16.51■□□□□ 0.23
SMARCB1-205ENST00000417137 PRNTQ86SH4 94 aa16.51■□□□□ 0.23
SMARCB1-205ENST00000417137 ZNF680Q8NEM1 530 aa16.51■□□□□ 0.23
SMARCB1-205ENST00000417137 MANBALQ9NQG1 85 aa16.51■□□□□ 0.23
SMARCB1-205ENST00000417137 IGHV1OR15-1A0A075B7D0 117 aa16.5■□□□□ 0.23
SMARCB1-205ENST00000417137 IGLV2-11P01706 119 aa16.5■□□□□ 0.23
SMARCB1-205ENST00000417137 ANXA2RQ3ZCQ2 193 aa16.5■□□□□ 0.23
SMARCB1-205ENST00000417137 Q6ZTC4 211 aa16.5■□□□□ 0.23
SMARCB1-205ENST00000417137 TVP23CQ96ET8 276 aa16.5■□□□□ 0.23
SMARCB1-205ENST00000417137 DNAH7Q8WXX0 4024 aa16.49■□□□□ 0.23
SMARCB1-205ENST00000417137 TRAV10A0A0B4J240 114 aa16.49■□□□□ 0.23
SMARCB1-205ENST00000417137 TRAV21A0A0B4J279 112 aa16.49■□□□□ 0.23
SMARCB1-205ENST00000417137 PLAC8L1A1L4L8 177 aa16.49■□□□□ 0.23
SMARCB1-205ENST00000417137 SNURFLB1AK76 121 aa16.49■□□□□ 0.23
SMARCB1-205ENST00000417137 ATP5G3P48201 142 aa16.49■□□□□ 0.23
SMARCB1-205ENST00000417137 DAD1P61803 113 aa16.49■□□□□ 0.23
SMARCB1-205ENST00000417137 ALKAL2Q6UX46 152 aa16.49■□□□□ 0.23
SMARCB1-205ENST00000417137 LINC00479Q96M42 142 aa16.49■□□□□ 0.23
SMARCB1-205ENST00000417137 GNG13Q9P2W3 67 aa16.49■□□□□ 0.23
SMARCB1-205ENST00000417137 BOLA1Q9Y3E2 137 aa16.49■□□□□ 0.23
SMARCB1-205ENST00000417137 TRAV34A0A0B4J273 112 aa16.48■□□□□ 0.23
SMARCB1-205ENST00000417137 BLOC1S1P78537 153 aa16.48■□□□□ 0.23
SMARCB1-205ENST00000417137 CCL20P78556 96 aa16.48■□□□□ 0.23
SMARCB1-205ENST00000417137 FAM159AQ6UWV7 190 aa16.48■□□□□ 0.23
SMARCB1-205ENST00000417137 ZNF767PQ75MW2 155 aa16.48■□□□□ 0.23
SMARCB1-205ENST00000417137 FMC1Q96HJ9 113 aa16.48■□□□□ 0.23
SMARCB1-205ENST00000417137 IFNA1P01562 189 aa16.47■□□□□ 0.23
SMARCB1-205ENST00000417137 UBE2G1P62253 170 aa16.47■□□□□ 0.23
SMARCB1-205ENST00000417137 SMUG1Q53HV7 270 aa16.47■□□□□ 0.23
SMARCB1-205ENST00000417137 C2CD4CQ8TF44 421 aa16.47■□□□□ 0.23
SMARCB1-205ENST00000417137 TXNDC17Q9BRA2 123 aa16.47■□□□□ 0.23
SMARCB1-205ENST00000417137 NOP10Q9NPE3 64 aaKnown RBP16.47■□□□□ 0.23
SMARCB1-205ENST00000417137 S100A9P06702 114 aaKnown RBP16.46■□□□□ 0.23
SMARCB1-205ENST00000417137 ZFP30Q9Y2G7 519 aa16.46■□□□□ 0.23
SMARCB1-205ENST00000417137 KLF12Q9Y4X4 402 aa16.46■□□□□ 0.23
SMARCB1-205ENST00000417137 DEFB131BA0A096LNP1 70 aa16.45■□□□□ 0.22
SMARCB1-205ENST00000417137 DEFB130BP0DP73 79 aa16.45■□□□□ 0.22
SMARCB1-205ENST00000417137 DEFB130AP0DP74 79 aa16.45■□□□□ 0.22
SMARCB1-205ENST00000417137 AKR1C3P42330 323 aa16.45■□□□□ 0.22
SMARCB1-205ENST00000417137 MUC21Q5SSG8 566 aa16.45■□□□□ 0.22
SMARCB1-205ENST00000417137 IBA57Q5T440 356 aaKnown RBP16.45■□□□□ 0.22
SMARCB1-205ENST00000417137 Q6ZQT7 251 aa16.45■□□□□ 0.22
SMARCB1-205ENST00000417137 C8orf49Q96NF6 230 aa16.45■□□□□ 0.22
SMARCB1-205ENST00000417137 TRBV6-1A0A0K0K1D8 114 aa16.44■□□□□ 0.22
SMARCB1-205ENST00000417137 DAZ2Q13117 558 aaKnown RBP16.44■□□□□ 0.22
SMARCB1-205ENST00000417137 GSN-AS1Q9NRJ2 163 aa16.44■□□□□ 0.22
SMARCB1-205ENST00000417137 GCGP01275 180 aa16.43■□□□□ 0.22
SMARCB1-205ENST00000417137 TAGLN2P37802 199 aaKnown RBP16.43■□□□□ 0.22
SMARCB1-205ENST00000417137 TMEM183BQ1AE95 376 aa16.43■□□□□ 0.22
SMARCB1-205ENST00000417137 Q86TA4 180 aa16.43■□□□□ 0.22
SMARCB1-205ENST00000417137 KCNS1Q96KK3 526 aa16.43■□□□□ 0.22
SMARCB1-205ENST00000417137 NAGKQ9UJ70 344 aa16.43■□□□□ 0.22
SMARCB1-205ENST00000417137 TRGV11A0A075B6L2 103 aa16.42■□□□□ 0.22
SMARCB1-205ENST00000417137 PFN1P07737 140 aaKnown RBP16.42■□□□□ 0.22
SMARCB1-205ENST00000417137 TCTAP57738 103 aa16.42■□□□□ 0.22
SMARCB1-205ENST00000417137 TDRG1Q3Y452 100 aa16.42■□□□□ 0.22
SMARCB1-205ENST00000417137 C11orf72Q8NBR9 251 aa16.42■□□□□ 0.22
SMARCB1-205ENST00000417137 TP53TG3Q9ULZ0 132 aa16.42■□□□□ 0.22
SMARCB1-205ENST00000417137 SCO2A0A1W2PP80 73 aa16.41■□□□□ 0.22
SMARCB1-205ENST00000417137 IGLL5B9A064 214 aa16.41■□□□□ 0.22
SMARCB1-205ENST00000417137 TCL1AP56279 114 aa16.41■□□□□ 0.22
SMARCB1-205ENST00000417137 ZNF415Q09FC8 603 aa16.41■□□□□ 0.22
SMARCB1-205ENST00000417137 FABP5P3A8MUU1 101 aa16.4■□□□□ 0.22
SMARCB1-205ENST00000417137 ZNF80P51504 273 aaPredicted RBP16.4■□□□□ 0.22
SMARCB1-205ENST00000417137 TMEM183AQ8IXX5 376 aa16.4■□□□□ 0.22
SMARCB1-205ENST00000417137 SDF2L1Q9HCN8 221 aa16.4■□□□□ 0.22
SMARCB1-205ENST00000417137 LTAP01374 205 aa16.39■□□□□ 0.21
SMARCB1-205ENST00000417137 HTN3P15516 51 aa16.39■□□□□ 0.21
SMARCB1-205ENST00000417137 VAX2Q9UIW0 290 aa16.39■□□□□ 0.21
SMARCB1-205ENST00000417137 PDE6DO43924 150 aa16.38■□□□□ 0.21
SMARCB1-205ENST00000417137 ATP5G1P05496 136 aa16.38■□□□□ 0.21
SMARCB1-205ENST00000417137 BCL2P10415 239 aa16.38■□□□□ 0.21
SMARCB1-205ENST00000417137 MEF2BQ02080 365 aaPredicted RBP16.38■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 82.3 ms