RNA–Protein interactions for RNA: ENST00000414963.2

SF3B1-204, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 1 (best) BASIC

Gene SF3B1, Length 651 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-204ENST00000414963 GPX1P07203 203 aa10.46□□□□□ -0.73
SF3B1-204ENST00000414963 NUTF2P61970 127 aaKnown RBP10.46□□□□□ -0.73
SF3B1-204ENST00000414963 LINC00322Q6ZN03 302 aaPredicted RBP10.46□□□□□ -0.73
SF3B1-204ENST00000414963 ISOC2Q96AB3 205 aa10.46□□□□□ -0.73
SF3B1-204ENST00000414963 KIR2DL5BA0A0G2JN68 375 aa10.45□□□□□ -0.74
SF3B1-204ENST00000414963 KIR2DL5BA0A0G2JPC4 375 aa10.45□□□□□ -0.74
SF3B1-204ENST00000414963 C19orf71A6NCJ1 209 aa10.45□□□□□ -0.74
SF3B1-204ENST00000414963 CRXO43186 299 aaPredicted RBP10.45□□□□□ -0.74
SF3B1-204ENST00000414963 ATP6V1G1O75348 118 aa10.45□□□□□ -0.74
SF3B1-204ENST00000414963 MGST1P10620 155 aaKnown RBP10.45□□□□□ -0.74
SF3B1-204ENST00000414963 ZNF80P51504 273 aaPredicted RBP10.45□□□□□ -0.74
SF3B1-204ENST00000414963 SPINK13Q1W4C9 94 aa10.45□□□□□ -0.74
SF3B1-204ENST00000414963 PRR9Q5T870 116 aa10.45□□□□□ -0.74
SF3B1-204ENST00000414963 Q6AWC8 147 aa10.45□□□□□ -0.74
SF3B1-204ENST00000414963 FAM231DQ6ZW35 169 aa10.45□□□□□ -0.74
SF3B1-204ENST00000414963 KIR2DL5AQ8N109 375 aa10.45□□□□□ -0.74
SF3B1-204ENST00000414963 KIR2DL5BQ8NHK3 375 aa10.45□□□□□ -0.74
SF3B1-204ENST00000414963 AURKAIP1Q9NWT8 199 aaPredicted RBP10.45□□□□□ -0.74
SF3B1-204ENST00000414963 AGRNO00468 2067 aa10.45□□□□□ -0.74
SF3B1-204ENST00000414963 DNHD1Q96M86 4753 aa10.44□□□□□ -0.74
SF3B1-204ENST00000414963 LOC102724200A0A096LPH7 203 aaPredicted RBP10.44□□□□□ -0.74
SF3B1-204ENST00000414963 C7orf71A4D174 169 aa10.44□□□□□ -0.74
SF3B1-204ENST00000414963 FABP5P3A8MUU1 101 aa10.44□□□□□ -0.74
SF3B1-204ENST00000414963 B4DEV8 164 aa10.44□□□□□ -0.74
SF3B1-204ENST00000414963 M0R2Z0 102 aa10.44□□□□□ -0.74
SF3B1-204ENST00000414963 APOC3P02656 99 aa10.44□□□□□ -0.74
SF3B1-204ENST00000414963 PFN1P07737 140 aaKnown RBP10.44□□□□□ -0.74
SF3B1-204ENST00000414963 GIG44P09565 113 aaPredicted RBP10.44□□□□□ -0.74
SF3B1-204ENST00000414963 IGHV4-30-4P0DP06 118 aa10.44□□□□□ -0.74
SF3B1-204ENST00000414963 S100A1P23297 94 aa10.44□□□□□ -0.74
SF3B1-204ENST00000414963 RNASE4P34096 147 aaKnown RBP10.44□□□□□ -0.74
SF3B1-204ENST00000414963 OR5I1Q13606 314 aa10.44□□□□□ -0.74
SF3B1-204ENST00000414963 KIR3DS1Q14943 382 aa10.44□□□□□ -0.74
SF3B1-204ENST00000414963 ADIRFQ15847 76 aa10.44□□□□□ -0.74
SF3B1-204ENST00000414963 FAM162BQ5T6X4 162 aa10.44□□□□□ -0.74
SF3B1-204ENST00000414963 GFI1BQ5VTD9 330 aa10.44□□□□□ -0.74
SF3B1-204ENST00000414963 SVBPQ8N300 66 aa10.44□□□□□ -0.74
SF3B1-204ENST00000414963 TUBA4BQ9H853 241 aa10.44□□□□□ -0.74
SF3B1-204ENST00000414963 OSTCQ9NRP0 149 aa10.44□□□□□ -0.74
SF3B1-204ENST00000414963 DNAH3Q8TD57 4116 aa10.43□□□□□ -0.74
SF3B1-204ENST00000414963 TRAV21A0A0B4J279 112 aa10.43□□□□□ -0.74
SF3B1-204ENST00000414963 ZNF324O75467 553 aaPredicted RBP10.43□□□□□ -0.74
SF3B1-204ENST00000414963 RPL35AP18077 110 aaKnown RBP10.43□□□□□ -0.74
SF3B1-204ENST00000414963 CLRN3Q8NCR9 226 aa10.43□□□□□ -0.74
SF3B1-204ENST00000414963 C20orf144Q9BQM9 153 aa10.43□□□□□ -0.74
SF3B1-204ENST00000414963 C1QTNF4Q9BXJ3 329 aa10.43□□□□□ -0.74
SF3B1-204ENST00000414963 CSTL1Q9H114 145 aa10.43□□□□□ -0.74
SF3B1-204ENST00000414963 SH2D1AO60880 128 aa10.42□□□□□ -0.74
SF3B1-204ENST00000414963 BTN1A1Q13410 526 aa10.42□□□□□ -0.74
SF3B1-204ENST00000414963 PRR27Q6MZM9 219 aa10.42□□□□□ -0.74
SF3B1-204ENST00000414963 NUDT10Q8NFP7 164 aa10.42□□□□□ -0.74
SF3B1-204ENST00000414963 NUDT11Q96G61 164 aa10.42□□□□□ -0.74
SF3B1-204ENST00000414963 SFRP2Q96HF1 295 aa10.42□□□□□ -0.74
SF3B1-204ENST00000414963 TRAV12-2A0A075B6T6 113 aa10.41□□□□□ -0.74
SF3B1-204ENST00000414963 M0R036 132 aa10.41□□□□□ -0.74
SF3B1-204ENST00000414963 UBE2CO00762 179 aa10.41□□□□□ -0.74
SF3B1-204ENST00000414963 SNAPINO95295 136 aa10.41□□□□□ -0.74
SF3B1-204ENST00000414963 APOC4P55056 127 aa10.41□□□□□ -0.74
SF3B1-204ENST00000414963 FXYD7P58549 80 aa10.41□□□□□ -0.74
SF3B1-204ENST00000414963 ERVFC1-1P60608 527 aa10.41□□□□□ -0.74
SF3B1-204ENST00000414963 RHEBQ15382 184 aa10.41□□□□□ -0.74
SF3B1-204ENST00000414963 CSNK1G2-AS1Q8NCQ2 148 aa10.41□□□□□ -0.74
SF3B1-204ENST00000414963 DAZAP1Q96EP5 407 aaKnown RBP10.41□□□□□ -0.74
SF3B1-204ENST00000414963 RNASE7Q9H1E1 156 aaKnown RBP10.41□□□□□ -0.74
SF3B1-204ENST00000414963 A0A087WWC5 75 aa10.4□□□□□ -0.74
SF3B1-204ENST00000414963 TRAV12-3A0A0B4J271 114 aa10.4□□□□□ -0.74
SF3B1-204ENST00000414963 J3KRW8 73 aa10.4□□□□□ -0.74
SF3B1-204ENST00000414963 PPP1R2P9O14990 202 aa10.4□□□□□ -0.74
SF3B1-204ENST00000414963 INSP01308 110 aa10.4□□□□□ -0.74
SF3B1-204ENST00000414963 MT-ND4LP03901 98 aa10.4□□□□□ -0.74
SF3B1-204ENST00000414963 IBA57Q5T440 356 aaKnown RBP10.4□□□□□ -0.74
SF3B1-204ENST00000414963 C15orf54Q8N8G6 183 aa10.4□□□□□ -0.74
SF3B1-204ENST00000414963 OR10G8Q8NGN5 311 aa10.4□□□□□ -0.74
SF3B1-204ENST00000414963 ANAPC16Q96DE5 110 aa10.4□□□□□ -0.74
SF3B1-204ENST00000414963 LINC00467Q9BRT7 94 aa10.4□□□□□ -0.74
SF3B1-204ENST00000414963 C11orf21Q9P2W6 132 aa10.4□□□□□ -0.74
SF3B1-204ENST00000414963 XCL2Q9UBD3 114 aa10.4□□□□□ -0.74
SF3B1-204ENST00000414963 C7orf77A4D0Y5 90 aa10.39□□□□□ -0.75
SF3B1-204ENST00000414963 K7EIL1 84 aa10.39□□□□□ -0.75
SF3B1-204ENST00000414963 CA1P00915 261 aaPredicted RBP10.39□□□□□ -0.75
SF3B1-204ENST00000414963 P01737 135 aa10.39□□□□□ -0.75
SF3B1-204ENST00000414963 RBMY1A1P0DJD3 496 aaKnown RBP10.39□□□□□ -0.75
SF3B1-204ENST00000414963 RBMY1CP0DJD4 496 aa10.39□□□□□ -0.75
SF3B1-204ENST00000414963 RBMY1FQ15415 496 aaKnown RBP10.39□□□□□ -0.75
SF3B1-204ENST00000414963 TDRG1Q3Y452 100 aa10.39□□□□□ -0.75
SF3B1-204ENST00000414963 RNF212Q495C1 297 aa10.39□□□□□ -0.75
SF3B1-204ENST00000414963 LINC01559Q495D7 138 aa10.39□□□□□ -0.75
SF3B1-204ENST00000414963 CT83Q5H943 113 aa10.39□□□□□ -0.75
SF3B1-204ENST00000414963 Q6ZQT7 251 aa10.39□□□□□ -0.75
SF3B1-204ENST00000414963 ZNF575Q86XF7 245 aa10.39□□□□□ -0.75
SF3B1-204ENST00000414963 TMEM256Q8N2U0 113 aa10.39□□□□□ -0.75
SF3B1-204ENST00000414963 CTDSP1Q9GZU7 261 aa10.39□□□□□ -0.75
SF3B1-204ENST00000414963 TMEM242Q9NWH2 141 aa10.39□□□□□ -0.75
SF3B1-204ENST00000414963 H7BYZ3 331 aa10.38□□□□□ -0.75
SF3B1-204ENST00000414963 GATCO43716 136 aaKnown RBP10.38□□□□□ -0.75
SF3B1-204ENST00000414963 C1orf158Q8N1D5 194 aa10.38□□□□□ -0.75
SF3B1-204ENST00000414963 PYGO2Q9BRQ0 406 aa10.38□□□□□ -0.75
SF3B1-204ENST00000414963 RPP21Q9H633 154 aaKnown RBP10.38□□□□□ -0.75
SF3B1-204ENST00000414963 V9GYV3 84 aa10.38□□□□□ -0.75
SF3B1-204ENST00000414963 IGKV3D-20A0A0C4DH25 116 aa10.37□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 111.6 ms