RNA–Protein interactions for RNA: ENST00000414057.6

SCAMP4-204, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 1 (best)

Gene SCAMP4, Length 1,477 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-204ENST00000414057 ZNF705FA8MVS1 300 aaPredicted RBP12.49□□□□□ -0.41
SCAMP4-204ENST00000414057 H7BYZ3 331 aa12.49□□□□□ -0.41
SCAMP4-204ENST00000414057 CMC4P56277 68 aaPredicted RBP12.49□□□□□ -0.41
SCAMP4-204ENST00000414057 C9orf47Q6ZRZ4 202 aa12.49□□□□□ -0.41
SCAMP4-204ENST00000414057 COX8CQ7Z4L0 72 aa12.49□□□□□ -0.41
SCAMP4-204ENST00000414057 NDFIP1Q9BT67 221 aa12.49□□□□□ -0.41
SCAMP4-204ENST00000414057 IGKV3-7A0A075B6H7 116 aa12.48□□□□□ -0.41
SCAMP4-204ENST00000414057 IGKV2-40A0A087WW87 121 aaPredicted RBP12.48□□□□□ -0.41
SCAMP4-204ENST00000414057 UBE2CO00762 179 aa12.48□□□□□ -0.41
SCAMP4-204ENST00000414057 IGKV2D-40P01614 121 aaPredicted RBP12.48□□□□□ -0.41
SCAMP4-204ENST00000414057 ERVFC1-1P60608 527 aa12.48□□□□□ -0.41
SCAMP4-204ENST00000414057 TMEM78Q5T7P6 136 aa12.48□□□□□ -0.41
SCAMP4-204ENST00000414057 CBLN2Q8IUK8 224 aa12.48□□□□□ -0.41
SCAMP4-204ENST00000414057 OR10G8Q8NGN5 311 aa12.48□□□□□ -0.41
SCAMP4-204ENST00000414057 SGK494Q96LW2 274 aa12.48□□□□□ -0.41
SCAMP4-204ENST00000414057 ZNF492Q9P255 531 aa12.48□□□□□ -0.41
SCAMP4-204ENST00000414057 LENEPQ9Y5L5 61 aa12.48□□□□□ -0.41
SCAMP4-204ENST00000414057 IBA57Q5T440 356 aaKnown RBP12.47□□□□□ -0.41
SCAMP4-204ENST00000414057 TMEM88Q6PEY1 159 aa12.47□□□□□ -0.41
SCAMP4-204ENST00000414057 GBGT1Q8N5D6 347 aa12.47□□□□□ -0.41
SCAMP4-204ENST00000414057 OR10J6PQ8NGY7 276 aa12.47□□□□□ -0.41
SCAMP4-204ENST00000414057 C20orf173Q96LM9 149 aa12.47□□□□□ -0.41
SCAMP4-204ENST00000414057 LINC00477Q96M19 166 aa12.47□□□□□ -0.41
SCAMP4-204ENST00000414057 IMMP2LQ96T52 175 aa12.47□□□□□ -0.41
SCAMP4-204ENST00000414057 TP53TG1Q9Y2A0 90 aa12.47□□□□□ -0.41
SCAMP4-204ENST00000414057 DYNC2H1Q8NCM8 4307 aaKnown RBP12.47□□□□□ -0.41
SCAMP4-204ENST00000414057 PRAC2D3DTV9 90 aa12.46□□□□□ -0.41
SCAMP4-204ENST00000414057 CT45A10P0DMU9 189 aa12.46□□□□□ -0.41
SCAMP4-204ENST00000414057 Q6ZWC4 215 aa12.46□□□□□ -0.41
SCAMP4-204ENST00000414057 NHLRC2Q8NBF2 726 aa12.46□□□□□ -0.41
SCAMP4-204ENST00000414057 VGLL1Q99990 258 aa12.46□□□□□ -0.41
SCAMP4-204ENST00000414057 OVOL2Q9BRP0 275 aa12.46□□□□□ -0.41
SCAMP4-204ENST00000414057 KIR2DL5BA0A0G2JN68 375 aa12.46□□□□□ -0.42
SCAMP4-204ENST00000414057 KIR2DL5BA0A0G2JPC4 375 aa12.46□□□□□ -0.42
SCAMP4-204ENST00000414057 TRBV7-9A0A0J9YWB2 115 aa12.46□□□□□ -0.42
SCAMP4-204ENST00000414057 ZNF138P52744 262 aa12.46□□□□□ -0.42
SCAMP4-204ENST00000414057 OR5I1Q13606 314 aa12.46□□□□□ -0.42
SCAMP4-204ENST00000414057 KIR2DL5AQ8N109 375 aa12.46□□□□□ -0.42
SCAMP4-204ENST00000414057 KIR2DL5BQ8NHK3 375 aa12.46□□□□□ -0.42
SCAMP4-204ENST00000414057 NPIPB6E9PJ23 425 aa12.45□□□□□ -0.42
SCAMP4-204ENST00000414057 S100PP25815 95 aa12.45□□□□□ -0.42
SCAMP4-204ENST00000414057 WFDC3Q8IUB2 231 aa12.45□□□□□ -0.42
SCAMP4-204ENST00000414057 OR8A1Q8NGG7 326 aa12.45□□□□□ -0.42
SCAMP4-204ENST00000414057 DAZAP1Q96EP5 407 aaKnown RBP12.45□□□□□ -0.42
SCAMP4-204ENST00000414057 AGPAT4-IT1Q9H0P7 198 aa12.45□□□□□ -0.42
SCAMP4-204ENST00000414057 ODF3L2Q3SX64 289 aa12.44□□□□□ -0.42
SCAMP4-204ENST00000414057 KCNIP4Q6PIL6 250 aa12.44□□□□□ -0.42
SCAMP4-204ENST00000414057 BTF3L4Q96K17 158 aa12.44□□□□□ -0.42
SCAMP4-204ENST00000414057 STARD9Q9P2P6 4700 aa12.43□□□□□ -0.42
SCAMP4-204ENST00000414057 SACSQ9NZJ4 4579 aa12.43□□□□□ -0.42
SCAMP4-204ENST00000414057 C19orf71A6NCJ1 209 aa12.43□□□□□ -0.42
SCAMP4-204ENST00000414057 SPRY2O43597 315 aa12.43□□□□□ -0.42
SCAMP4-204ENST00000414057 TFPI2P48307 235 aa12.43□□□□□ -0.42
SCAMP4-204ENST00000414057 SMUG1Q53HV7 270 aa12.43□□□□□ -0.42
SCAMP4-204ENST00000414057 CT83Q5H943 113 aa12.43□□□□□ -0.42
SCAMP4-204ENST00000414057 PSMG4Q5JS54 123 aa12.43□□□□□ -0.42
SCAMP4-204ENST00000414057 PRR27Q6MZM9 219 aa12.43□□□□□ -0.42
SCAMP4-204ENST00000414057 OR4B1Q8NGF8 309 aa12.43□□□□□ -0.42
SCAMP4-204ENST00000414057 ZC2HC1AQ96GY0 325 aa12.43□□□□□ -0.42
SCAMP4-204ENST00000414057 RNASE7Q9H1E1 156 aaKnown RBP12.43□□□□□ -0.42
SCAMP4-204ENST00000414057 V9GYV3 84 aa12.43□□□□□ -0.42
SCAMP4-204ENST00000414057 GATCO43716 136 aaKnown RBP12.42□□□□□ -0.42
SCAMP4-204ENST00000414057 P01737 135 aa12.42□□□□□ -0.42
SCAMP4-204ENST00000414057 ZNF688P0C7X2 276 aa12.42□□□□□ -0.42
SCAMP4-204ENST00000414057 ERCC8Q13216 396 aa12.42□□□□□ -0.42
SCAMP4-204ENST00000414057 NUDT10Q8NFP7 164 aa12.42□□□□□ -0.42
SCAMP4-204ENST00000414057 NUDT11Q96G61 164 aa12.42□□□□□ -0.42
SCAMP4-204ENST00000414057 TRAV9-1A0A075B6T8 112 aa12.41□□□□□ -0.42
SCAMP4-204ENST00000414057 ZNF705GA8MUZ8 300 aaPredicted RBP12.41□□□□□ -0.42
SCAMP4-204ENST00000414057 DUSP14O95147 198 aaKnown RBP12.41□□□□□ -0.42
SCAMP4-204ENST00000414057 HIST1H1AQ02539 215 aaPredicted RBP12.41□□□□□ -0.42
SCAMP4-204ENST00000414057 FAM162BQ5T6X4 162 aa12.41□□□□□ -0.42
SCAMP4-204ENST00000414057 EBLN2Q6P2I7 272 aa12.41□□□□□ -0.42
SCAMP4-204ENST00000414057 FOXI2Q6ZQN5 318 aa12.41□□□□□ -0.42
SCAMP4-204ENST00000414057 Q8TAT8 98 aa12.41□□□□□ -0.42
SCAMP4-204ENST00000414057 YPEL4Q96NS1 127 aa12.41□□□□□ -0.42
SCAMP4-204ENST00000414057 ODF3Q96PU9 254 aa12.41□□□□□ -0.42
SCAMP4-204ENST00000414057 IL36BQ9NZH7 164 aa12.41□□□□□ -0.42
SCAMP4-204ENST00000414057 CSMD3Q7Z407 3707 aa12.41□□□□□ -0.42
SCAMP4-204ENST00000414057 PFN1P07737 140 aaKnown RBP12.4□□□□□ -0.42
SCAMP4-204ENST00000414057 ELOBQ15370 118 aa12.4□□□□□ -0.42
SCAMP4-204ENST00000414057 DEFB135Q30KP9 77 aa12.4□□□□□ -0.42
SCAMP4-204ENST00000414057 FAM24BQ8N5W8 94 aa12.4□□□□□ -0.42
SCAMP4-204ENST00000414057 C8orf49Q96NF6 230 aa12.4□□□□□ -0.42
SCAMP4-204ENST00000414057 RPP21Q9H633 154 aaKnown RBP12.4□□□□□ -0.42
SCAMP4-204ENST00000414057 MAP6D1Q9H9H5 199 aa12.4□□□□□ -0.42
SCAMP4-204ENST00000414057 RYR2Q92736 4967 aa12.4□□□□□ -0.42
SCAMP4-204ENST00000414057 TRBV24-1A0A075B6N3 115 aa12.4□□□□□ -0.43
SCAMP4-204ENST00000414057 A0A0J9YX75 114 aa12.4□□□□□ -0.43
SCAMP4-204ENST00000414057 COLCA2A8K830 154 aa12.4□□□□□ -0.43
SCAMP4-204ENST00000414057 RPL35AP18077 110 aaKnown RBP12.4□□□□□ -0.43
SCAMP4-204ENST00000414057 RNF183Q96D59 192 aa12.4□□□□□ -0.43
SCAMP4-204ENST00000414057 TENM2Q9NT68 2774 aa12.4□□□□□ -0.43
SCAMP4-204ENST00000414057 LYSTQ99698 3801 aa12.39□□□□□ -0.43
SCAMP4-204ENST00000414057 FAM231BA6NCW3 169 aa12.39□□□□□ -0.43
SCAMP4-204ENST00000414057 RPL19P84098 196 aaKnown RBP12.39□□□□□ -0.43
SCAMP4-204ENST00000414057 APRG1Q8IVJ8 170 aa12.39□□□□□ -0.43
SCAMP4-204ENST00000414057 SREK1IP1Q8N9Q2 155 aaPredicted RBP12.39□□□□□ -0.43
SCAMP4-204ENST00000414057 FAM19A4Q96LR4 140 aa12.39□□□□□ -0.43
SCAMP4-204ENST00000414057 SAV1Q9H4B6 383 aaPredicted RBP12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms