RNA–Protein interactions for RNA: ENST00000413872.6

PHRF1-202, Transcript of PHD and ring finger domains 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PHRF1, Length 5,224 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-202ENST00000413872 RMI2Q96E14 147 aa13.64□□□□□ -0.23
PHRF1-202ENST00000413872 WIPF3A6NGB9 483 aa13.64□□□□□ -0.23
PHRF1-202ENST00000413872 Q8N8P6 123 aa13.64□□□□□ -0.23
PHRF1-202ENST00000413872 ZNF479Q96JC4 524 aa13.63□□□□□ -0.23
PHRF1-202ENST00000413872 TMEM213A2RRL7 107 aa13.63□□□□□ -0.23
PHRF1-202ENST00000413872 SPAG8Q99932 426 aaPredicted RBP13.63□□□□□ -0.23
PHRF1-202ENST00000413872 IGHV4-38-2P0DP08 117 aa13.63□□□□□ -0.23
PHRF1-202ENST00000413872 Q8NA96 180 aa13.63□□□□□ -0.23
PHRF1-202ENST00000413872 C3orf79P0CE67 100 aa13.63□□□□□ -0.23
PHRF1-202ENST00000413872 ZC2HC1BQ5TFG8 222 aa13.63□□□□□ -0.23
PHRF1-202ENST00000413872 OVOL2Q9BRP0 275 aa13.62□□□□□ -0.23
PHRF1-202ENST00000413872 TMEM243Q9BU79 118 aa13.62□□□□□ -0.23
PHRF1-202ENST00000413872 LEPROTO15243 131 aa13.62□□□□□ -0.23
PHRF1-202ENST00000413872 ZNF726P1Q15940 193 aa13.62□□□□□ -0.23
PHRF1-202ENST00000413872 SPRNQ5BIV9 151 aa13.62□□□□□ -0.23
PHRF1-202ENST00000413872 PRORYQ9H606 182 aa13.62□□□□□ -0.23
PHRF1-202ENST00000413872 IGHV7-81A0A0B4J1V7 117 aa13.62□□□□□ -0.23
PHRF1-202ENST00000413872 RBAKDNA6NC62 111 aa13.62□□□□□ -0.23
PHRF1-202ENST00000413872 FNDC4Q9H6D8 234 aaPredicted RBP13.62□□□□□ -0.23
PHRF1-202ENST00000413872 GUSBP1Q15486 140 aa13.61□□□□□ -0.23
PHRF1-202ENST00000413872 C2orf66Q6UXQ4 117 aa13.61□□□□□ -0.23
PHRF1-202ENST00000413872 PLXNB3Q9ULL4 1909 aa13.61□□□□□ -0.23
PHRF1-202ENST00000413872 PYGO2Q9BRQ0 406 aa13.61□□□□□ -0.23
PHRF1-202ENST00000413872 SDHAF1A6NFY7 115 aa13.61□□□□□ -0.23
PHRF1-202ENST00000413872 TP53TG1Q9Y2A0 90 aa13.61□□□□□ -0.23
PHRF1-202ENST00000413872 TRAV12-2A0A075B6T6 113 aa13.6□□□□□ -0.23
PHRF1-202ENST00000413872 ZNF561-AS1K7EIQ3 104 aa13.6□□□□□ -0.23
PHRF1-202ENST00000413872 CFHR3Q02985 330 aa13.6□□□□□ -0.23
PHRF1-202ENST00000413872 SFTA2Q6UW10 78 aa13.6□□□□□ -0.23
PHRF1-202ENST00000413872 A8MWP6 167 aa13.6□□□□□ -0.23
PHRF1-202ENST00000413872 IL15RAQ13261 267 aa13.6□□□□□ -0.23
PHRF1-202ENST00000413872 VWC2Q2TAL6 325 aa13.6□□□□□ -0.23
PHRF1-202ENST00000413872 TMEM89A2RUT3 159 aa13.59□□□□□ -0.23
PHRF1-202ENST00000413872 RNF152Q8N8N0 203 aa13.59□□□□□ -0.23
PHRF1-202ENST00000413872 ZNRF2Q8NHG8 242 aa13.59□□□□□ -0.23
PHRF1-202ENST00000413872 DEFB104AQ8WTQ1 72 aa13.59□□□□□ -0.23
PHRF1-202ENST00000413872 CYYR1Q96J86 154 aa13.59□□□□□ -0.23
PHRF1-202ENST00000413872 IGFBPL1Q8WX77 278 aa13.59□□□□□ -0.23
PHRF1-202ENST00000413872 NEGR1Q7Z3B1 354 aa13.59□□□□□ -0.23
PHRF1-202ENST00000413872 BCL6BQ8N143 479 aaPredicted RBP13.59□□□□□ -0.23
PHRF1-202ENST00000413872 IGHV3-16A0A0C4DH30 117 aa13.58□□□□□ -0.23
PHRF1-202ENST00000413872 CUL9Q8IWT3 2517 aa13.58□□□□□ -0.23
PHRF1-202ENST00000413872 TEX48A0A1B0GUV7 120 aa13.58□□□□□ -0.24
PHRF1-202ENST00000413872 ADCYAP1P18509 176 aa13.58□□□□□ -0.24
PHRF1-202ENST00000413872 MED13Q9UHV7 2174 aa13.58□□□□□ -0.24
PHRF1-202ENST00000413872 IGLV11-55A0A075B6I3 123 aa13.57□□□□□ -0.24
PHRF1-202ENST00000413872 PMVKQ15126 192 aa13.57□□□□□ -0.24
PHRF1-202ENST00000413872 GATD1Q8NB37 220 aa13.57□□□□□ -0.24
PHRF1-202ENST00000413872 TRAV8-2A0A0B4J237 113 aa13.57□□□□□ -0.24
PHRF1-202ENST00000413872 V9GYV3 84 aa13.57□□□□□ -0.24
PHRF1-202ENST00000413872 C18orf32Q8TCD1 76 aa13.57□□□□□ -0.24
PHRF1-202ENST00000413872 SMIM27A0A1W2PRY6 76 aa13.57□□□□□ -0.24
PHRF1-202ENST00000413872 F8WEM9 126 aa13.57□□□□□ -0.24
PHRF1-202ENST00000413872 RHOHQ15669 191 aa13.57□□□□□ -0.24
PHRF1-202ENST00000413872 MRPL51Q4U2R6 128 aaKnown RBP13.56□□□□□ -0.24
PHRF1-202ENST00000413872 SAMD5Q5TGI4 173 aa13.56□□□□□ -0.24
PHRF1-202ENST00000413872 ZC2HC1AQ96GY0 325 aa13.56□□□□□ -0.24
PHRF1-202ENST00000413872 CHAC1Q9BUX1 264 aa13.56□□□□□ -0.24
PHRF1-202ENST00000413872 EREGO14944 169 aa13.56□□□□□ -0.24
PHRF1-202ENST00000413872 C5orf56Q8N8D9 126 aa13.56□□□□□ -0.24
PHRF1-202ENST00000413872 Q8N9W7 124 aa13.56□□□□□ -0.24
PHRF1-202ENST00000413872 C20orf78Q9BR46 151 aa13.56□□□□□ -0.24
PHRF1-202ENST00000413872 I3L2K1 104 aa13.55□□□□□ -0.24
PHRF1-202ENST00000413872 ESDP10768 282 aa13.55□□□□□ -0.24
PHRF1-202ENST00000413872 LRRC75A-AS1Q8N1F1 130 aa13.55□□□□□ -0.24
PHRF1-202ENST00000413872 NOTCH2Q04721 2471 aa13.55□□□□□ -0.24
PHRF1-202ENST00000413872 C9JQL5 133 aa13.55□□□□□ -0.24
PHRF1-202ENST00000413872 IGLV1-47P01700 117 aa13.55□□□□□ -0.24
PHRF1-202ENST00000413872 ATRXP46100 2492 aa13.55□□□□□ -0.24
PHRF1-202ENST00000413872 BLCAPP62952 87 aa13.55□□□□□ -0.24
PHRF1-202ENST00000413872 LYPD6Q86Y78 171 aa13.55□□□□□ -0.24
PHRF1-202ENST00000413872 ANKHD1Q8IWZ3 2542 aaKnown RBP13.55□□□□□ -0.24
PHRF1-202ENST00000413872 hDV102S1A0JD36 115 aa13.55□□□□□ -0.24
PHRF1-202ENST00000413872 LTAP01374 205 aa13.55□□□□□ -0.24
PHRF1-202ENST00000413872 K7EIM0 57 aa13.54□□□□□ -0.24
PHRF1-202ENST00000413872 SMIM2Q9BVW6 85 aa13.54□□□□□ -0.24
PHRF1-202ENST00000413872 AGPAT4-IT1Q9H0P7 198 aa13.54□□□□□ -0.24
PHRF1-202ENST00000413872 TMEM95Q3KNT9 176 aa13.54□□□□□ -0.24
PHRF1-202ENST00000413872 ZNF493Q6ZR52 646 aa13.54□□□□□ -0.24
PHRF1-202ENST00000413872 AJUBAQ96IF1 538 aa13.54□□□□□ -0.24
PHRF1-202ENST00000413872 PCP4P48539 62 aa13.53□□□□□ -0.24
PHRF1-202ENST00000413872 LOXL1Q08397 574 aaPredicted RBP13.53□□□□□ -0.24
PHRF1-202ENST00000413872 NPC2P61916 151 aa13.53□□□□□ -0.24
PHRF1-202ENST00000413872 PRSS57Q6UWY2 283 aa13.53□□□□□ -0.24
PHRF1-202ENST00000413872 GP9P14770 177 aa13.52□□□□□ -0.24
PHRF1-202ENST00000413872 INS-IGF2F8WCM5 200 aa13.52□□□□□ -0.25
PHRF1-202ENST00000413872 K7EMT4 169 aa13.52□□□□□ -0.25
PHRF1-202ENST00000413872 HLA-DRB4P13762 266 aa13.52□□□□□ -0.25
PHRF1-202ENST00000413872 MYCNOSP40205 109 aa13.52□□□□□ -0.25
PHRF1-202ENST00000413872 DEFB136Q30KP8 78 aa13.52□□□□□ -0.25
PHRF1-202ENST00000413872 HLA-DRB4X5D2U9 266 aa13.52□□□□□ -0.25
PHRF1-202ENST00000413872 DYNAPQ8N1N2 210 aa13.52□□□□□ -0.25
PHRF1-202ENST00000413872 NRGNQ92686 78 aa13.52□□□□□ -0.25
PHRF1-202ENST00000413872 SIRPDQ9H106 197 aa13.52□□□□□ -0.25
PHRF1-202ENST00000413872 TRAV25A0A0B4J276 109 aa13.51□□□□□ -0.25
PHRF1-202ENST00000413872 IGHV1-24A0A0C4DH33 117 aa13.51□□□□□ -0.25
PHRF1-202ENST00000413872 SLURP1P55000 103 aa13.51□□□□□ -0.25
PHRF1-202ENST00000413872 GAGE6Q13070 117 aa13.51□□□□□ -0.25
PHRF1-202ENST00000413872 DOCK11Q5JSL3 2073 aa13.51□□□□□ -0.25
PHRF1-202ENST00000413872 ZFP36P26651 326 aaKnown RBP13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 786.6 ms