RNA–Protein interactions for RNA: ENST00000412218.1

LINC01643-201, Transcript of long intergenic non-protein coding RNA 1643, humanhuman

TSL 5 BASIC

Gene LINC01643, Length 757 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01643-201ENST00000412218 KIR2DL5AQ8N109 375 aa7.5□□□□□ -1.21
LINC01643-201ENST00000412218 ARL6IP6Q8N6S5 226 aa7.5□□□□□ -1.21
LINC01643-201ENST00000412218 KIR2DL5BQ8NHK3 375 aa7.5□□□□□ -1.21
LINC01643-201ENST00000412218 HIST1H2BHQ93079 126 aa7.5□□□□□ -1.21
LINC01643-201ENST00000412218 GPR82Q96P67 336 aa7.5□□□□□ -1.21
LINC01643-201ENST00000412218 HIST1H2BNQ99877 126 aa7.5□□□□□ -1.21
LINC01643-201ENST00000412218 HIST1H2BMQ99879 126 aa7.5□□□□□ -1.21
LINC01643-201ENST00000412218 CSMD3Q7Z407 3707 aa7.5□□□□□ -1.21
LINC01643-201ENST00000412218 DYNC2H1Q8NCM8 4307 aaKnown RBP7.49□□□□□ -1.21
LINC01643-201ENST00000412218 IGKV3-7A0A075B6H7 116 aa7.49□□□□□ -1.21
LINC01643-201ENST00000412218 PHOX2AO14813 284 aa7.49□□□□□ -1.21
LINC01643-201ENST00000412218 MRPS12O15235 138 aaKnown RBP7.49□□□□□ -1.21
LINC01643-201ENST00000412218 SPRY2O43597 315 aa7.49□□□□□ -1.21
LINC01643-201ENST00000412218 ZNF253O75346 499 aa7.49□□□□□ -1.21
LINC01643-201ENST00000412218 TRGC1P0CF51 173 aa7.49□□□□□ -1.21
LINC01643-201ENST00000412218 RPL35AP18077 110 aaKnown RBP7.49□□□□□ -1.21
LINC01643-201ENST00000412218 HOXA5P20719 270 aa7.49□□□□□ -1.21
LINC01643-201ENST00000412218 CMC4P56277 68 aaPredicted RBP7.49□□□□□ -1.21
LINC01643-201ENST00000412218 NDUFA6P56556 154 aa7.49□□□□□ -1.21
LINC01643-201ENST00000412218 GNG5P63218 68 aa7.49□□□□□ -1.21
LINC01643-201ENST00000412218 PSG9Q00887 426 aa7.49□□□□□ -1.21
LINC01643-201ENST00000412218 OR5I1Q13606 314 aa7.49□□□□□ -1.21
LINC01643-201ENST00000412218 ZNF124Q15973 351 aa7.49□□□□□ -1.21
LINC01643-201ENST00000412218 DEFB135Q30KP9 77 aa7.49□□□□□ -1.21
LINC01643-201ENST00000412218 TCF24Q7RTU0 167 aa7.49□□□□□ -1.21
LINC01643-201ENST00000412218 TMEM75Q8N9X5 138 aa7.49□□□□□ -1.21
LINC01643-201ENST00000412218 FRZBQ92765 325 aa7.49□□□□□ -1.21
LINC01643-201ENST00000412218 AAMDCQ9H7C9 122 aa7.49□□□□□ -1.21
LINC01643-201ENST00000412218 MAP6D1Q9H9H5 199 aa7.49□□□□□ -1.21
LINC01643-201ENST00000412218 ZNF492Q9P255 531 aa7.49□□□□□ -1.21
LINC01643-201ENST00000412218 RPH3ALQ9UNE2 315 aa7.49□□□□□ -1.21
LINC01643-201ENST00000412218 TRAV2A0A0B4J234 112 aa7.48□□□□□ -1.21
LINC01643-201ENST00000412218 IGHV3-66A0A0C4DH42 116 aa7.48□□□□□ -1.21
LINC01643-201ENST00000412218 FBLL1A6NHQ2 334 aaKnown RBP7.48□□□□□ -1.21
LINC01643-201ENST00000412218 ZNF705GA8MUZ8 300 aaPredicted RBP7.48□□□□□ -1.21
LINC01643-201ENST00000412218 GATCO43716 136 aaKnown RBP7.48□□□□□ -1.21
LINC01643-201ENST00000412218 LTAP01374 205 aa7.48□□□□□ -1.21
LINC01643-201ENST00000412218 MT-ND6P03923 174 aa7.48□□□□□ -1.21
LINC01643-201ENST00000412218 SMIM6P0DI80 62 aa7.48□□□□□ -1.21
LINC01643-201ENST00000412218 CSN1S1P47710 185 aa7.48□□□□□ -1.21
LINC01643-201ENST00000412218 CT83Q5H943 113 aa7.48□□□□□ -1.21
LINC01643-201ENST00000412218 WDR73Q6P4I2 378 aa7.48□□□□□ -1.21
LINC01643-201ENST00000412218 SIGLEC15Q6ZMC9 328 aa7.48□□□□□ -1.21
LINC01643-201ENST00000412218 Q86TA4 180 aa7.48□□□□□ -1.21
LINC01643-201ENST00000412218 LINC00518Q8N0U6 118 aa7.48□□□□□ -1.21
LINC01643-201ENST00000412218 GBGT1Q8N5D6 347 aa7.48□□□□□ -1.21
LINC01643-201ENST00000412218 RNF183Q96D59 192 aa7.48□□□□□ -1.21
LINC01643-201ENST00000412218 GRAMD2BQ96HH9 432 aa7.48□□□□□ -1.21
LINC01643-201ENST00000412218 MS4A6AQ9H2W1 248 aa7.48□□□□□ -1.21
LINC01643-201ENST00000412218 LYSTQ99698 3801 aa7.47□□□□□ -1.21
LINC01643-201ENST00000412218 TRAV34A0A0B4J273 112 aa7.47□□□□□ -1.21
LINC01643-201ENST00000412218 A0A0J9YWU9 116 aa7.47□□□□□ -1.21
LINC01643-201ENST00000412218 SMIM27A0A1W2PRY6 76 aa7.47□□□□□ -1.21
LINC01643-201ENST00000412218 SLC17A3O00476 420 aa7.47□□□□□ -1.21
LINC01643-201ENST00000412218 MEOX2P50222 304 aa7.47□□□□□ -1.21
LINC01643-201ENST00000412218 PAFAH1B2P68402 229 aa7.47□□□□□ -1.21
LINC01643-201ENST00000412218 C1orf194Q5T5A4 169 aa7.47□□□□□ -1.21
LINC01643-201ENST00000412218 LINC00479Q96M42 142 aa7.47□□□□□ -1.21
LINC01643-201ENST00000412218 METTL26Q96S19 204 aa7.47□□□□□ -1.21
LINC01643-201ENST00000412218 RNASE7Q9H1E1 156 aaKnown RBP7.47□□□□□ -1.21
LINC01643-201ENST00000412218 TRAPPC1Q9Y5R8 145 aa7.47□□□□□ -1.21
LINC01643-201ENST00000412218 SACSQ9NZJ4 4579 aa7.46□□□□□ -1.22
LINC01643-201ENST00000412218 A0A087X0K7 114 aa7.46□□□□□ -1.22
LINC01643-201ENST00000412218 A0A1W2PS18 150 aa7.46□□□□□ -1.22
LINC01643-201ENST00000412218 H3BTX0 84 aa7.46□□□□□ -1.22
LINC01643-201ENST00000412218 SNRPCP09234 159 aaKnown RBP7.46□□□□□ -1.22
LINC01643-201ENST00000412218 S100A2P29034 98 aa7.46□□□□□ -1.22
LINC01643-201ENST00000412218 COA6Q5JTJ3 125 aaKnown RBP7.46□□□□□ -1.22
LINC01643-201ENST00000412218 RASL11AQ6T310 242 aa7.46□□□□□ -1.22
LINC01643-201ENST00000412218 GOLT1AQ6ZVE7 132 aa7.46□□□□□ -1.22
LINC01643-201ENST00000412218 TMEM183AQ8IXX5 376 aa7.46□□□□□ -1.22
LINC01643-201ENST00000412218 OR8I2Q8N0Y5 310 aa7.46□□□□□ -1.22
LINC01643-201ENST00000412218 OR4B1Q8NGF8 309 aa7.46□□□□□ -1.22
LINC01643-201ENST00000412218 MLST8Q9BVC4 326 aa7.46□□□□□ -1.22
LINC01643-201ENST00000412218 CSTL1Q9H114 145 aa7.46□□□□□ -1.22
LINC01643-201ENST00000412218 ZFP30Q9Y2G7 519 aa7.46□□□□□ -1.22
LINC01643-201ENST00000412218 DEFB131AP59861 70 aa7.45□□□□□ -1.22
LINC01643-201ENST00000412218 RPL11P62913 178 aaKnown RBP7.45□□□□□ -1.22
LINC01643-201ENST00000412218 PRR27Q6MZM9 219 aa7.45□□□□□ -1.22
LINC01643-201ENST00000412218 HIST3H2BBQ8N257 126 aa7.45□□□□□ -1.22
LINC01643-201ENST00000412218 EXOC3-AS1Q8N2X6 119 aa7.45□□□□□ -1.22
LINC01643-201ENST00000412218 NHLRC2Q8NBF2 726 aa7.45□□□□□ -1.22
LINC01643-201ENST00000412218 NUDT10Q8NFP7 164 aa7.45□□□□□ -1.22
LINC01643-201ENST00000412218 TSKUQ8WUA8 353 aa7.45□□□□□ -1.22
LINC01643-201ENST00000412218 DAZAP1Q96EP5 407 aaKnown RBP7.45□□□□□ -1.22
LINC01643-201ENST00000412218 NUDT11Q96G61 164 aa7.45□□□□□ -1.22
LINC01643-201ENST00000412218 SLC50A1Q9BRV3 221 aa7.45□□□□□ -1.22
LINC01643-201ENST00000412218 GNB1LQ9BYB4 327 aa7.45□□□□□ -1.22
LINC01643-201ENST00000412218 RPP21Q9H633 154 aaKnown RBP7.45□□□□□ -1.22
LINC01643-201ENST00000412218 U3KQE9 123 aa7.45□□□□□ -1.22
LINC01643-201ENST00000412218 TENM2Q9NT68 2774 aa7.45□□□□□ -1.22
LINC01643-201ENST00000412218 XKRY2A2RUG3 117 aa7.44□□□□□ -1.22
LINC01643-201ENST00000412218 C19orf71A6NCJ1 209 aa7.44□□□□□ -1.22
LINC01643-201ENST00000412218 A8MWL6 223 aa7.44□□□□□ -1.22
LINC01643-201ENST00000412218 DIRC3C9JPN6 131 aa7.44□□□□□ -1.22
LINC01643-201ENST00000412218 K7EQG2 157 aa7.44□□□□□ -1.22
LINC01643-201ENST00000412218 P01737 135 aa7.44□□□□□ -1.22
LINC01643-201ENST00000412218 HLA-DQA1P01909 254 aa7.44□□□□□ -1.22
LINC01643-201ENST00000412218 PSG3Q16557 428 aa7.44□□□□□ -1.22
LINC01643-201ENST00000412218 ATP5L2Q7Z4Y8 100 aa7.44□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms