RNA–Protein interactions for RNA: ENST00000411849.1

HMGN1P20-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 20, humanhuman

BASIC

Gene HMGN1P20, Length 300 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P20-201ENST00000411849 S100A7AQ86SG5 101 aa4.05□□□□□ -1.76
HMGN1P20-201ENST00000411849 ZNF546Q86UE3 836 aa4.05□□□□□ -1.76
HMGN1P20-201ENST00000411849 C10orf126Q8N4M7 172 aa4.05□□□□□ -1.76
HMGN1P20-201ENST00000411849 ZNF680Q8NEM1 530 aa4.05□□□□□ -1.76
HMGN1P20-201ENST00000411849 RPUSD4Q96CM3 377 aaKnown RBP4.05□□□□□ -1.76
HMGN1P20-201ENST00000411849 PYGO2Q9BRQ0 406 aa4.05□□□□□ -1.76
HMGN1P20-201ENST00000411849 MED28Q9H204 178 aa4.05□□□□□ -1.76
HMGN1P20-201ENST00000411849 DNAJC4Q9NNZ3 241 aa4.05□□□□□ -1.76
HMGN1P20-201ENST00000411849 RNF24Q9Y225 148 aa4.05□□□□□ -1.76
HMGN1P20-201ENST00000411849 FUT9Q9Y231 359 aa4.05□□□□□ -1.76
HMGN1P20-201ENST00000411849 A0A087X0K7 114 aa4.04□□□□□ -1.76
HMGN1P20-201ENST00000411849 TRGV1A0A0A0MS02 117 aa4.04□□□□□ -1.76
HMGN1P20-201ENST00000411849 UBE2L5PA0A1B0GUS4 154 aa4.04□□□□□ -1.76
HMGN1P20-201ENST00000411849 FGF7P21781 194 aa4.04□□□□□ -1.76
HMGN1P20-201ENST00000411849 RPL12P30050 165 aaKnown RBP4.04□□□□□ -1.76
HMGN1P20-201ENST00000411849 BAXQ07812 192 aa4.04□□□□□ -1.76
HMGN1P20-201ENST00000411849 RGS21Q2M5E4 152 aa4.04□□□□□ -1.76
HMGN1P20-201ENST00000411849 GFI1BQ5VTD9 330 aa4.04□□□□□ -1.76
HMGN1P20-201ENST00000411849 MORN5Q5VZ52 161 aa4.04□□□□□ -1.76
HMGN1P20-201ENST00000411849 C10orf113Q5VZT2 155 aa4.04□□□□□ -1.76
HMGN1P20-201ENST00000411849 Q6ZRG5 221 aa4.04□□□□□ -1.76
HMGN1P20-201ENST00000411849 SLC50A1Q9BRV3 221 aa4.04□□□□□ -1.76
HMGN1P20-201ENST00000411849 NPCDR1Q9BY65 106 aa4.04□□□□□ -1.76
HMGN1P20-201ENST00000411849 SLC39A9Q9NUM3 307 aa4.04□□□□□ -1.76
HMGN1P20-201ENST00000411849 FAM30AQ9NZY2 134 aa4.04□□□□□ -1.76
HMGN1P20-201ENST00000411849 MBD2Q9UBB5 411 aa4.04□□□□□ -1.76
HMGN1P20-201ENST00000411849 PRO0255Q9UI72 69 aa4.04□□□□□ -1.76
HMGN1P20-201ENST00000411849 HSPB11Q9Y547 144 aa4.04□□□□□ -1.76
HMGN1P20-201ENST00000411849 PXMP4Q9Y6I8 212 aa4.04□□□□□ -1.76
HMGN1P20-201ENST00000411849 TRAV5A0A0B4J249 113 aa4.03□□□□□ -1.76
HMGN1P20-201ENST00000411849 TRAV12-3A0A0B4J271 114 aa4.03□□□□□ -1.76
HMGN1P20-201ENST00000411849 LRCOL1A6NCL2 159 aa4.03□□□□□ -1.76
HMGN1P20-201ENST00000411849 COX7A2P2O60397 106 aa4.03□□□□□ -1.76
HMGN1P20-201ENST00000411849 CRYGDP07320 174 aa4.03□□□□□ -1.76
HMGN1P20-201ENST00000411849 PET100P0DJ07 73 aa4.03□□□□□ -1.76
HMGN1P20-201ENST00000411849 CXCL2P19875 107 aa4.03□□□□□ -1.76
HMGN1P20-201ENST00000411849 SRIP30626 198 aa4.03□□□□□ -1.76
HMGN1P20-201ENST00000411849 LEPP41159 167 aa4.03□□□□□ -1.76
HMGN1P20-201ENST00000411849 KIR3DS1Q14943 382 aa4.03□□□□□ -1.76
HMGN1P20-201ENST00000411849 Q5BKY6 102 aa4.03□□□□□ -1.76
HMGN1P20-201ENST00000411849 LCN15Q6UWW0 184 aa4.03□□□□□ -1.76
HMGN1P20-201ENST00000411849 BPIFA4PQ86YQ2 179 aa4.03□□□□□ -1.76
HMGN1P20-201ENST00000411849 Q8N814 137 aa4.03□□□□□ -1.76
HMGN1P20-201ENST00000411849 OR1L4Q8NGR5 311 aa4.03□□□□□ -1.76
HMGN1P20-201ENST00000411849 THAP6Q8TBB0 222 aa4.03□□□□□ -1.76
HMGN1P20-201ENST00000411849 SAT2Q96F10 170 aaPredicted RBP4.03□□□□□ -1.76
HMGN1P20-201ENST00000411849 ST6GAL2Q96JF0 529 aa4.03□□□□□ -1.76
HMGN1P20-201ENST00000411849 ODF3Q96PU9 254 aa4.03□□□□□ -1.76
HMGN1P20-201ENST00000411849 PFDN5Q99471 154 aa4.03□□□□□ -1.76
HMGN1P20-201ENST00000411849 WDR61Q9GZS3 305 aaKnown RBP4.03□□□□□ -1.76
HMGN1P20-201ENST00000411849 WFDC1Q9HC57 220 aa4.03□□□□□ -1.76
HMGN1P20-201ENST00000411849 GSN-AS1Q9NRJ2 163 aa4.03□□□□□ -1.76
HMGN1P20-201ENST00000411849 HHLA3Q9XRX5 114 aa4.03□□□□□ -1.76
HMGN1P20-201ENST00000411849 G3V3Q6 166 aa4.02□□□□□ -1.77
HMGN1P20-201ENST00000411849 H3BQ15 152 aa4.02□□□□□ -1.77
HMGN1P20-201ENST00000411849 SPINK4O60575 86 aa4.02□□□□□ -1.77
HMGN1P20-201ENST00000411849 SNRPCP09234 159 aaKnown RBP4.02□□□□□ -1.77
HMGN1P20-201ENST00000411849 GIPP09681 153 aaPredicted RBP4.02□□□□□ -1.77
HMGN1P20-201ENST00000411849 IGLC2P0DOY2 106 aa4.02□□□□□ -1.77
HMGN1P20-201ENST00000411849 CRYBA4P53673 196 aa4.02□□□□□ -1.77
HMGN1P20-201ENST00000411849 GCSAMLQ5JQS6 135 aa4.02□□□□□ -1.77
HMGN1P20-201ENST00000411849 Q6ZSA8 131 aa4.02□□□□□ -1.77
HMGN1P20-201ENST00000411849 WFDC10BQ8IUB3 73 aa4.02□□□□□ -1.77
HMGN1P20-201ENST00000411849 C11orf72Q8NBR9 251 aa4.02□□□□□ -1.77
HMGN1P20-201ENST00000411849 PCNPQ8WW12 178 aaKnown RBP4.02□□□□□ -1.77
HMGN1P20-201ENST00000411849 ASB13Q8WXK3 278 aa4.02□□□□□ -1.77
HMGN1P20-201ENST00000411849 FAM167A-AS1Q96KT0 104 aa4.02□□□□□ -1.77
HMGN1P20-201ENST00000411849 AQP10Q96PS8 301 aa4.02□□□□□ -1.77
HMGN1P20-201ENST00000411849 ATP5SQ99766 215 aa4.02□□□□□ -1.77
HMGN1P20-201ENST00000411849 VGLL1Q99990 258 aa4.02□□□□□ -1.77
HMGN1P20-201ENST00000411849 PARD6GQ9BYG4 376 aaPredicted RBP4.02□□□□□ -1.77
HMGN1P20-201ENST00000411849 SMIM3Q9BZL3 60 aa4.02□□□□□ -1.77
HMGN1P20-201ENST00000411849 ZNF331Q9NQX6 463 aaPredicted RBP4.02□□□□□ -1.77
HMGN1P20-201ENST00000411849 C17orf112F2Z3M2 114 aa4.01□□□□□ -1.77
HMGN1P20-201ENST00000411849 H3BTX0 84 aa4.01□□□□□ -1.77
HMGN1P20-201ENST00000411849 J3KRW8 73 aa4.01□□□□□ -1.77
HMGN1P20-201ENST00000411849 SLC17A3O00476 420 aa4.01□□□□□ -1.77
HMGN1P20-201ENST00000411849 RS1O15537 224 aa4.01□□□□□ -1.77
HMGN1P20-201ENST00000411849 ORM1P02763 201 aa4.01□□□□□ -1.77
HMGN1P20-201ENST00000411849 SLC25A5P05141 298 aaKnown RBP4.01□□□□□ -1.77
HMGN1P20-201ENST00000411849 PRB4P10163 310 aaPredicted RBP4.01□□□□□ -1.77
HMGN1P20-201ENST00000411849 HIST1H1EP10412 219 aaKnown RBP4.01□□□□□ -1.77
HMGN1P20-201ENST00000411849 TCL1AP56279 114 aa4.01□□□□□ -1.77
HMGN1P20-201ENST00000411849 TDRG1Q3Y452 100 aa4.01□□□□□ -1.77
HMGN1P20-201ENST00000411849 ANXA2RQ3ZCQ2 193 aa4.01□□□□□ -1.77
HMGN1P20-201ENST00000411849 MIR17HGQ75NE6 70 aa4.01□□□□□ -1.77
HMGN1P20-201ENST00000411849 EIF4E3Q8N5X7 224 aaKnown RBP4.01□□□□□ -1.77
HMGN1P20-201ENST00000411849 C8orf49Q96NF6 230 aa4.01□□□□□ -1.77
HMGN1P20-201ENST00000411849 TXNDC17Q9BRA2 123 aa4.01□□□□□ -1.77
HMGN1P20-201ENST00000411849 TMEM14CQ9P0S9 112 aa4.01□□□□□ -1.77
HMGN1P20-201ENST00000411849 VPS13BQ7Z7G8 4022 aa4□□□□□ -1.77
HMGN1P20-201ENST00000411849 TRGV4A0A0C4DH28 118 aa4□□□□□ -1.77
HMGN1P20-201ENST00000411849 IGHV3-38A0A0C4DH36 116 aa4□□□□□ -1.77
HMGN1P20-201ENST00000411849 C7orf71A4D174 169 aa4□□□□□ -1.77
HMGN1P20-201ENST00000411849 RNF222A6NCQ9 220 aa4□□□□□ -1.77
HMGN1P20-201ENST00000411849 PRAC2D3DTV9 90 aa4□□□□□ -1.77
HMGN1P20-201ENST00000411849 K7EQD1 137 aa4□□□□□ -1.77
HMGN1P20-201ENST00000411849 ZNF253O75346 499 aa4□□□□□ -1.77
HMGN1P20-201ENST00000411849 NDUFB4O95168 129 aa4□□□□□ -1.77
HMGN1P20-201ENST00000411849 IGHV3-53P01767 116 aa4□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 71.7 ms