RNA–Protein interactions for RNA: ENST00000410093.5

LIMS1-205, Transcript of LIM zinc finger domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene LIMS1, Length 1,526 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS1-205ENST00000410093 IGHV3OR16-8A0A075B7F1 116 aa10.38□□□□□ -0.75
LIMS1-205ENST00000410093 IGHV7-4-1A0A0J9YVY3 117 aa10.38□□□□□ -0.75
LIMS1-205ENST00000410093 INAFM1C9JVW0 142 aa10.38□□□□□ -0.75
LIMS1-205ENST00000410093 PPBPP02775 128 aa10.38□□□□□ -0.75
LIMS1-205ENST00000410093 RNASEKQ6P5S7 137 aaKnown RBP10.38□□□□□ -0.75
LIMS1-205ENST00000410093 NDUFAF3Q9BU61 184 aa10.38□□□□□ -0.75
LIMS1-205ENST00000410093 U3KQK5 164 aa10.38□□□□□ -0.75
LIMS1-205ENST00000410093 HIVEP2P31629 2446 aa10.37□□□□□ -0.75
LIMS1-205ENST00000410093 C20orf202A1L168 122 aa10.37□□□□□ -0.75
LIMS1-205ENST00000410093 ELANEP08246 267 aa10.37□□□□□ -0.75
LIMS1-205ENST00000410093 KRTDAPP60985 99 aa10.37□□□□□ -0.75
LIMS1-205ENST00000410093 FAM104BQ5XKR9 115 aa10.37□□□□□ -0.75
LIMS1-205ENST00000410093 VAMP8Q9BV40 100 aa10.37□□□□□ -0.75
LIMS1-205ENST00000410093 TMEM191AQ9H0A3 160 aa10.37□□□□□ -0.75
LIMS1-205ENST00000410093 AGPAT4-IT1Q9H0P7 198 aa10.37□□□□□ -0.75
LIMS1-205ENST00000410093 YAE1D1Q9NRH1 226 aa10.37□□□□□ -0.75
LIMS1-205ENST00000410093 LAMTOR2Q9Y2Q5 125 aa10.37□□□□□ -0.75
LIMS1-205ENST00000410093 NIPBLQ6KC79 2804 aaeCLIP10.36□□□□□ -0.75
LIMS1-205ENST00000410093 IGHV4-59P01825 116 aa10.36□□□□□ -0.75
LIMS1-205ENST00000410093 ORM1P02763 201 aa10.36□□□□□ -0.75
LIMS1-205ENST00000410093 BTF3P20290 206 aaKnown RBP10.36□□□□□ -0.75
LIMS1-205ENST00000410093 NTF3P20783 257 aa10.36□□□□□ -0.75
LIMS1-205ENST00000410093 HLA-DMBP28068 263 aa10.36□□□□□ -0.75
LIMS1-205ENST00000410093 OR10J6PQ8NGY7 276 aa10.36□□□□□ -0.75
LIMS1-205ENST00000410093 Q8TAT8 98 aa10.36□□□□□ -0.75
LIMS1-205ENST00000410093 KLK15Q9H2R5 256 aa10.36□□□□□ -0.75
LIMS1-205ENST00000410093 PRO1933Q9H354 126 aa10.36□□□□□ -0.75
LIMS1-205ENST00000410093 IGHV3-66A0A0C4DH42 116 aa10.35□□□□□ -0.75
LIMS1-205ENST00000410093 FAM181BA6NEQ2 426 aa10.35□□□□□ -0.75
LIMS1-205ENST00000410093 PRAC2D3DTV9 90 aa10.35□□□□□ -0.75
LIMS1-205ENST00000410093 SOCS3O14543 225 aa10.35□□□□□ -0.75
LIMS1-205ENST00000410093 ZNF207O43670 478 aaKnown RBP10.35□□□□□ -0.75
LIMS1-205ENST00000410093 CD5LO43866 347 aa10.35□□□□□ -0.75
LIMS1-205ENST00000410093 ID1P41134 155 aa10.35□□□□□ -0.75
LIMS1-205ENST00000410093 IGFL4Q6B9Z1 124 aa10.35□□□□□ -0.75
LIMS1-205ENST00000410093 IL17RELQ6ZVW7 336 aa10.35□□□□□ -0.75
LIMS1-205ENST00000410093 ORMDL3Q8N138 153 aa10.35□□□□□ -0.75
LIMS1-205ENST00000410093 RNF182Q8N6D2 247 aa10.35□□□□□ -0.75
LIMS1-205ENST00000410093 SMPXQ9UHP9 88 aa10.35□□□□□ -0.75
LIMS1-205ENST00000410093 HSPB8Q9UJY1 196 aa10.35□□□□□ -0.75
LIMS1-205ENST00000410093 CSPG4Q6UVK1 2322 aa10.35□□□□□ -0.75
LIMS1-205ENST00000410093 CRXO43186 299 aaPredicted RBP10.34□□□□□ -0.75
LIMS1-205ENST00000410093 C3orf79P0CE67 100 aa10.34□□□□□ -0.75
LIMS1-205ENST00000410093 ZNF80P51504 273 aaPredicted RBP10.34□□□□□ -0.75
LIMS1-205ENST00000410093 CACNG7P62955 275 aa10.34□□□□□ -0.75
LIMS1-205ENST00000410093 UNQ9165/PRO28630Q6UXU0 137 aa10.34□□□□□ -0.75
LIMS1-205ENST00000410093 KLHDC1Q8N7A1 406 aa10.34□□□□□ -0.75
LIMS1-205ENST00000410093 RNF152Q8N8N0 203 aa10.34□□□□□ -0.75
LIMS1-205ENST00000410093 ZNF738Q8NE65 137 aa10.34□□□□□ -0.75
LIMS1-205ENST00000410093 TPPP3Q9BW30 176 aa10.34□□□□□ -0.75
LIMS1-205ENST00000410093 NF1P21359 2839 aa10.34□□□□□ -0.75
LIMS1-205ENST00000410093 TRBV12-3P01733 135 aa10.33□□□□□ -0.76
LIMS1-205ENST00000410093 ERCC8Q13216 396 aa10.33□□□□□ -0.76
LIMS1-205ENST00000410093 SMIM15Q7Z3B0 74 aa10.33□□□□□ -0.76
LIMS1-205ENST00000410093 FAM19A2Q8N3H0 131 aa10.33□□□□□ -0.76
LIMS1-205ENST00000410093 TMEM86BQ8N661 226 aa10.33□□□□□ -0.76
LIMS1-205ENST00000410093 C14orf144Q96I85 54 aa10.33□□□□□ -0.76
LIMS1-205ENST00000410093 TMEM70Q9BUB7 260 aa10.33□□□□□ -0.76
LIMS1-205ENST00000410093 RHPN1-AS1Q9BWJ2 59 aa10.33□□□□□ -0.76
LIMS1-205ENST00000410093 AP5S1Q9NUS5 200 aa10.33□□□□□ -0.76
LIMS1-205ENST00000410093 CR1P17927 2039 aa10.33□□□□□ -0.76
LIMS1-205ENST00000410093 LGALS9O00182 355 aa10.33□□□□□ -0.76
LIMS1-205ENST00000410093 LEPROTL1O95214 131 aa10.33□□□□□ -0.76
LIMS1-205ENST00000410093 IGHV3-11P01762 117 aa10.33□□□□□ -0.76
LIMS1-205ENST00000410093 TWIST1Q15672 202 aa10.33□□□□□ -0.76
LIMS1-205ENST00000410093 FA2HQ7L5A8 372 aa10.33□□□□□ -0.76
LIMS1-205ENST00000410093 Q8N976 141 aa10.33□□□□□ -0.76
LIMS1-205ENST00000410093 MYOZ3Q8TDC0 251 aa10.33□□□□□ -0.76
LIMS1-205ENST00000410093 URB1-AS1Q96HZ7 61 aa10.33□□□□□ -0.76
LIMS1-205ENST00000410093 IGHV4-4A0A075B6R2 117 aa10.32□□□□□ -0.76
LIMS1-205ENST00000410093 IGHV3OR16-13A0A075B7E8 117 aa10.32□□□□□ -0.76
LIMS1-205ENST00000410093 TMSB15BA0A087X1C1 80 aa10.32□□□□□ -0.76
LIMS1-205ENST00000410093 IGHV3-49A0A0A0MS15 119 aa10.32□□□□□ -0.76
LIMS1-205ENST00000410093 IGHV3-74A0A0B4J1X5 117 aa10.32□□□□□ -0.76
LIMS1-205ENST00000410093 TRAV21A0A0B4J279 112 aa10.32□□□□□ -0.76
LIMS1-205ENST00000410093 CRLF1O75462 422 aa10.32□□□□□ -0.76
LIMS1-205ENST00000410093 MED14OSP0DP75 135 aa10.32□□□□□ -0.76
LIMS1-205ENST00000410093 Q6ZS46 218 aa10.32□□□□□ -0.76
LIMS1-205ENST00000410093 APRG1Q8IVJ8 170 aa10.32□□□□□ -0.76
LIMS1-205ENST00000410093 PRSS3P2Q8NHM4 247 aa10.32□□□□□ -0.76
LIMS1-205ENST00000410093 UBE2E2Q96LR5 201 aa10.32□□□□□ -0.76
LIMS1-205ENST00000410093 MIEN1Q9BRT3 115 aa10.32□□□□□ -0.76
LIMS1-205ENST00000410093 TLN2Q9Y4G6 2542 aa10.31□□□□□ -0.76
LIMS1-205ENST00000410093 IGHV1-24A0A0C4DH33 117 aa10.31□□□□□ -0.76
LIMS1-205ENST00000410093 C2orf70A6NJV1 201 aa10.31□□□□□ -0.76
LIMS1-205ENST00000410093 KRTAP1-1Q07627 177 aa10.31□□□□□ -0.76
LIMS1-205ENST00000410093 PET117Q6UWS5 81 aa10.31□□□□□ -0.76
LIMS1-205ENST00000410093 Q8N2B8 174 aa10.31□□□□□ -0.76
LIMS1-205ENST00000410093 OR10AG1Q8NH19 301 aa10.31□□□□□ -0.76
LIMS1-205ENST00000410093 PRELID3AQ96N28 172 aa10.31□□□□□ -0.76
LIMS1-205ENST00000410093 MAP1LC3CQ9BXW4 147 aa10.31□□□□□ -0.76
LIMS1-205ENST00000410093 SNAI2O43623 268 aa10.3□□□□□ -0.76
LIMS1-205ENST00000410093 LGALS1P09382 135 aaKnown RBP10.3□□□□□ -0.76
LIMS1-205ENST00000410093 FAM19A4Q96LR4 140 aa10.3□□□□□ -0.76
LIMS1-205ENST00000410093 ODF3Q96PU9 254 aa10.3□□□□□ -0.76
LIMS1-205ENST00000410093 IGKV3D-20A0A0C4DH25 116 aa10.29□□□□□ -0.76
LIMS1-205ENST00000410093 TMEM213A2RRL7 107 aa10.29□□□□□ -0.76
LIMS1-205ENST00000410093 CKS2P33552 79 aa10.29□□□□□ -0.76
LIMS1-205ENST00000410093 RPL11P62913 178 aaKnown RBP10.29□□□□□ -0.76
LIMS1-205ENST00000410093 MRPL51Q4U2R6 128 aaKnown RBP10.29□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms