RNA–Protein interactions for RNA: ENST00000410044.5

LSM5-207, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 3 BASIC

Gene LSM5, Length 687 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-207ENST00000410044 C1orf158Q8N1D5 194 aa11.07□□□□□ -0.64
LSM5-207ENST00000410044 EIF4E3Q8N5X7 224 aaKnown RBP11.07□□□□□ -0.64
LSM5-207ENST00000410044 SMIM12Q96EX1 92 aa11.07□□□□□ -0.64
LSM5-207ENST00000410044 ASCL2Q99929 193 aa11.07□□□□□ -0.64
LSM5-207ENST00000410044 C7orf71A4D174 169 aa11.06□□□□□ -0.64
LSM5-207ENST00000410044 INSP01308 110 aa11.06□□□□□ -0.64
LSM5-207ENST00000410044 SMUG1Q53HV7 270 aa11.06□□□□□ -0.64
LSM5-207ENST00000410044 PRR9Q5T870 116 aa11.06□□□□□ -0.64
LSM5-207ENST00000410044 UQCC3Q6UW78 93 aa11.06□□□□□ -0.64
LSM5-207ENST00000410044 BAGE2Q86Y30 109 aa11.06□□□□□ -0.64
LSM5-207ENST00000410044 TMEM256Q8N2U0 113 aa11.06□□□□□ -0.64
LSM5-207ENST00000410044 C8orf49Q96NF6 230 aa11.06□□□□□ -0.64
LSM5-207ENST00000410044 PARLQ9H300 379 aa11.06□□□□□ -0.64
LSM5-207ENST00000410044 TRBV20OR9-2A0A075B6H5 130 aa11.05□□□□□ -0.64
LSM5-207ENST00000410044 C9JCJ5 164 aa11.05□□□□□ -0.64
LSM5-207ENST00000410044 SPRY2O43597 315 aa11.05□□□□□ -0.64
LSM5-207ENST00000410044 IGLV2-8P01709 118 aa11.05□□□□□ -0.64
LSM5-207ENST00000410044 NHLRC4P0CG21 123 aaPredicted RBP11.05□□□□□ -0.64
LSM5-207ENST00000410044 RBMY1A1P0DJD3 496 aaKnown RBP11.05□□□□□ -0.64
LSM5-207ENST00000410044 RBMY1CP0DJD4 496 aa11.05□□□□□ -0.64
LSM5-207ENST00000410044 RNASE4P34096 147 aaKnown RBP11.05□□□□□ -0.64
LSM5-207ENST00000410044 RBMY1FQ15415 496 aaKnown RBP11.05□□□□□ -0.64
LSM5-207ENST00000410044 RCHY1Q96PM5 261 aa11.05□□□□□ -0.64
LSM5-207ENST00000410044 NEU1Q99519 415 aa11.05□□□□□ -0.64
LSM5-207ENST00000410044 SPATA25Q9BR10 227 aa11.05□□□□□ -0.64
LSM5-207ENST00000410044 OVOL2Q9BRP0 275 aa11.05□□□□□ -0.64
LSM5-207ENST00000410044 LINC00467Q9BRT7 94 aa11.05□□□□□ -0.64
LSM5-207ENST00000410044 TRAV12-3A0A0B4J271 114 aa11.04□□□□□ -0.64
LSM5-207ENST00000410044 ZNF80P51504 273 aaPredicted RBP11.04□□□□□ -0.64
LSM5-207ENST00000410044 BTN1A1Q13410 526 aa11.04□□□□□ -0.64
LSM5-207ENST00000410044 DEFB135Q30KP9 77 aa11.04□□□□□ -0.64
LSM5-207ENST00000410044 FAM74A3Q4VXF1 159 aa11.04□□□□□ -0.64
LSM5-207ENST00000410044 GOLT1BQ9Y3E0 138 aa11.04□□□□□ -0.64
LSM5-207ENST00000410044 LY96Q9Y6Y9 160 aa11.04□□□□□ -0.64
LSM5-207ENST00000410044 TRAV21A0A0B4J279 112 aa11.03□□□□□ -0.64
LSM5-207ENST00000410044 SMIM9A6NGZ8 99 aa11.03□□□□□ -0.64
LSM5-207ENST00000410044 H7BYZ3 331 aa11.03□□□□□ -0.64
LSM5-207ENST00000410044 J3KRW8 73 aa11.03□□□□□ -0.64
LSM5-207ENST00000410044 GCGP01275 180 aa11.03□□□□□ -0.64
LSM5-207ENST00000410044 GNG4P50150 75 aa11.03□□□□□ -0.64
LSM5-207ENST00000410044 CRIP1P50238 77 aa11.03□□□□□ -0.64
LSM5-207ENST00000410044 ZNF674Q2M3X9 581 aa11.03□□□□□ -0.64
LSM5-207ENST00000410044 CENPWQ5EE01 88 aa11.03□□□□□ -0.64
LSM5-207ENST00000410044 ZC2HC1AQ96GY0 325 aa11.03□□□□□ -0.64
LSM5-207ENST00000410044 NIPSNAP3BQ9BS92 247 aa11.03□□□□□ -0.64
LSM5-207ENST00000410044 MEGF8Q7Z7M0 2845 aa11.03□□□□□ -0.64
LSM5-207ENST00000410044 FABP5P3A8MUU1 101 aa11.02□□□□□ -0.65
LSM5-207ENST00000410044 PFN1P07737 140 aaKnown RBP11.02□□□□□ -0.65
LSM5-207ENST00000410044 COMMD7Q86VX2 200 aa11.02□□□□□ -0.65
LSM5-207ENST00000410044 LINC01587Q99440 93 aa11.02□□□□□ -0.65
LSM5-207ENST00000410044 SMIM7Q9BQ49 75 aa11.02□□□□□ -0.65
LSM5-207ENST00000410044 PYGO2Q9BRQ0 406 aa11.02□□□□□ -0.65
LSM5-207ENST00000410044 X6R8D5 127 aa11.02□□□□□ -0.65
LSM5-207ENST00000410044 ZNF727A8MUV8 499 aa11.01□□□□□ -0.65
LSM5-207ENST00000410044 TDRG1Q3Y452 100 aa11.01□□□□□ -0.65
LSM5-207ENST00000410044 SOHLH1Q5JUK2 328 aa11.01□□□□□ -0.65
LSM5-207ENST00000410044 Q6ZQT7 251 aa11.01□□□□□ -0.65
LSM5-207ENST00000410044 OR11H2Q8NH07 326 aa11.01□□□□□ -0.65
LSM5-207ENST00000410044 OCC1Q8TAD7 63 aa11.01□□□□□ -0.65
LSM5-207ENST00000410044 ZMAT4Q9H898 229 aa11.01□□□□□ -0.65
LSM5-207ENST00000410044 DNAH9Q9NYC9 4486 aa11.01□□□□□ -0.65
LSM5-207ENST00000410044 CEBPGP53567 150 aa11□□□□□ -0.65
LSM5-207ENST00000410044 TMEM208Q9BTX3 173 aa11□□□□□ -0.65
LSM5-207ENST00000410044 BIN3Q9NQY0 253 aa11□□□□□ -0.65
LSM5-207ENST00000410044 IGHV1OR15-1A0A075B7D0 117 aa10.99□□□□□ -0.65
LSM5-207ENST00000410044 MIFP14174 115 aa10.99□□□□□ -0.65
LSM5-207ENST00000410044 TMEM241Q24JQ0 296 aa10.99□□□□□ -0.65
LSM5-207ENST00000410044 ANXA2RQ3ZCQ2 193 aa10.99□□□□□ -0.65
LSM5-207ENST00000410044 FAM162BQ5T6X4 162 aa10.99□□□□□ -0.65
LSM5-207ENST00000410044 NHLRC2Q8NBF2 726 aa10.99□□□□□ -0.65
LSM5-207ENST00000410044 RETNQ9HD89 108 aa10.99□□□□□ -0.65
LSM5-207ENST00000410044 TMEM218A2RU14 115 aa10.98□□□□□ -0.65
LSM5-207ENST00000410044 C19orf71A6NCJ1 209 aa10.98□□□□□ -0.65
LSM5-207ENST00000410044 PGPEP1LA6NFU8 196 aa10.98□□□□□ -0.65
LSM5-207ENST00000410044 SFTA3P0C7M3 94 aa10.98□□□□□ -0.65
LSM5-207ENST00000410044 ZNF493Q6ZR52 646 aa10.98□□□□□ -0.65
LSM5-207ENST00000410044 KCNS1Q96KK3 526 aa10.98□□□□□ -0.65
LSM5-207ENST00000410044 C11orf21Q9P2W6 132 aa10.98□□□□□ -0.65
LSM5-207ENST00000410044 IGHV3OR16-12A0A075B7B8 117 aa10.97□□□□□ -0.65
LSM5-207ENST00000410044 K7EN84 100 aa10.97□□□□□ -0.65
LSM5-207ENST00000410044 SH2D1AO60880 128 aa10.97□□□□□ -0.65
LSM5-207ENST00000410044 RRN3P1Q2M238 152 aa10.97□□□□□ -0.65
LSM5-207ENST00000410044 FAM159AQ6UWV7 190 aa10.97□□□□□ -0.65
LSM5-207ENST00000410044 LINC01551Q86U37 167 aa10.97□□□□□ -0.65
LSM5-207ENST00000410044 Q8NAQ8 132 aa10.97□□□□□ -0.65
LSM5-207ENST00000410044 SDF2L1Q9HCN8 221 aa10.97□□□□□ -0.65
LSM5-207ENST00000410044 NAT8Q9UHE5 227 aa10.97□□□□□ -0.65
LSM5-207ENST00000410044 TP53TG3Q9ULZ0 132 aa10.97□□□□□ -0.65
LSM5-207ENST00000410044 PRKDCP78527 4128 aaKnown RBP10.97□□□□□ -0.65
LSM5-207ENST00000410044 FBN3Q75N90 2809 aa10.97□□□□□ -0.65
LSM5-207ENST00000410044 IGKV3D-20A0A0C4DH25 116 aa10.96□□□□□ -0.65
LSM5-207ENST00000410044 ZNF705GA8MUZ8 300 aaPredicted RBP10.96□□□□□ -0.65
LSM5-207ENST00000410044 MGST1P10620 155 aaKnown RBP10.96□□□□□ -0.65
LSM5-207ENST00000410044 AZU1P20160 251 aa10.96□□□□□ -0.65
LSM5-207ENST00000410044 LINC01559Q495D7 138 aa10.96□□□□□ -0.65
LSM5-207ENST00000410044 DNLZQ5SXM8 178 aa10.96□□□□□ -0.65
LSM5-207ENST00000410044 ZNF575Q86XF7 245 aa10.96□□□□□ -0.65
LSM5-207ENST00000410044 NBEAL2Q6ZNJ1 2754 aa10.96□□□□□ -0.66
LSM5-207ENST00000410044 HUWE1Q7Z6Z7 4374 aaKnown RBP10.96□□□□□ -0.66
LSM5-207ENST00000410044 KRBOX1C9JBD0 128 aa10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms