RNA–Protein interactions for RNA: ENST00000409810.6

CHMP3-205, Transcript of charged multivesicular body protein 3, humanhuman

TSL 5

Gene CHMP3, Length 559 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-205ENST00000409810 ARL2-SNX15V9GYD0 113 aa7.8□□□□□ -1.16
CHMP3-205ENST00000409810 KMT2CQ8NEZ4 4911 aaKnown RBP7.79□□□□□ -1.16
CHMP3-205ENST00000409810 DEFB131BA0A096LNP1 70 aa7.79□□□□□ -1.16
CHMP3-205ENST00000409810 CBY3A6NI87 242 aa7.79□□□□□ -1.16
CHMP3-205ENST00000409810 FAM74A7A6NL05 159 aa7.79□□□□□ -1.16
CHMP3-205ENST00000409810 TEX46H3BTG2 121 aa7.79□□□□□ -1.16
CHMP3-205ENST00000409810 ZNF324O75467 553 aaPredicted RBP7.79□□□□□ -1.16
CHMP3-205ENST00000409810 IFNA7P01567 189 aa7.79□□□□□ -1.16
CHMP3-205ENST00000409810 AZU1P20160 251 aa7.79□□□□□ -1.16
CHMP3-205ENST00000409810 PPT1P50897 306 aa7.79□□□□□ -1.16
CHMP3-205ENST00000409810 ZNF767PQ75MW2 155 aa7.79□□□□□ -1.16
CHMP3-205ENST00000409810 EIF4E3Q8N5X7 224 aaKnown RBP7.79□□□□□ -1.16
CHMP3-205ENST00000409810 TMEM75Q8N9X5 138 aa7.79□□□□□ -1.16
CHMP3-205ENST00000409810 SFT2D1Q8WV19 159 aa7.79□□□□□ -1.16
CHMP3-205ENST00000409810 LINC00467Q9BRT7 94 aa7.79□□□□□ -1.16
CHMP3-205ENST00000409810 TCEAL7Q9BRU2 100 aa7.79□□□□□ -1.16
CHMP3-205ENST00000409810 TMPRSS5Q9H3S3 457 aa7.79□□□□□ -1.16
CHMP3-205ENST00000409810 EPDR1Q9UM22 224 aa7.79□□□□□ -1.16
CHMP3-205ENST00000409810 PLECQ15149 4684 aaKnown RBP7.78□□□□□ -1.16
CHMP3-205ENST00000409810 TRAV8-1A0A0A6YYK1 113 aa7.78□□□□□ -1.16
CHMP3-205ENST00000409810 LCE6AA0A183 80 aa7.78□□□□□ -1.16
CHMP3-205ENST00000409810 PLAC8L1A1L4L8 177 aa7.78□□□□□ -1.16
CHMP3-205ENST00000409810 F6UZH7 168 aa7.78□□□□□ -1.16
CHMP3-205ENST00000409810 PRM2P04554 102 aa7.78□□□□□ -1.16
CHMP3-205ENST00000409810 H2AFB1P0C5Y9 115 aa7.78□□□□□ -1.16
CHMP3-205ENST00000409810 FHITP49789 147 aa7.78□□□□□ -1.16
CHMP3-205ENST00000409810 ANXA2RQ3ZCQ2 193 aa7.78□□□□□ -1.16
CHMP3-205ENST00000409810 PRR9Q5T870 116 aa7.78□□□□□ -1.16
CHMP3-205ENST00000409810 Q6AWC8 147 aa7.78□□□□□ -1.16
CHMP3-205ENST00000409810 MBD3L1Q8WWY6 194 aa7.78□□□□□ -1.16
CHMP3-205ENST00000409810 HIST1H2BAQ96A08 127 aa7.78□□□□□ -1.16
CHMP3-205ENST00000409810 TREM1Q9NP99 234 aa7.78□□□□□ -1.16
CHMP3-205ENST00000409810 ALMS1Q8TCU4 4167 aa7.77□□□□□ -1.17
CHMP3-205ENST00000409810 IGHV1OR15-1A0A075B7D0 117 aa7.77□□□□□ -1.17
CHMP3-205ENST00000409810 TRAV21A0A0B4J279 112 aa7.77□□□□□ -1.17
CHMP3-205ENST00000409810 IGLL5B9A064 214 aa7.77□□□□□ -1.17
CHMP3-205ENST00000409810 FLI1Q01543 452 aaPredicted RBP7.77□□□□□ -1.17
CHMP3-205ENST00000409810 CST9LP1Q5W188 147 aa7.77□□□□□ -1.17
CHMP3-205ENST00000409810 C9orf62Q8N4C0 152 aa7.77□□□□□ -1.17
CHMP3-205ENST00000409810 NOP10Q9NPE3 64 aaKnown RBP7.77□□□□□ -1.17
CHMP3-205ENST00000409810 PSG8Q9UQ74 426 aa7.77□□□□□ -1.17
CHMP3-205ENST00000409810 TRGV11A0A075B6L2 103 aa7.76□□□□□ -1.17
CHMP3-205ENST00000409810 IGHV4-4A0A075B6R2 117 aa7.76□□□□□ -1.17
CHMP3-205ENST00000409810 A0A1B0GVG6 124 aa7.76□□□□□ -1.17
CHMP3-205ENST00000409810 PEX7O00628 323 aa7.76□□□□□ -1.17
CHMP3-205ENST00000409810 DEFB130BP0DP73 79 aa7.76□□□□□ -1.17
CHMP3-205ENST00000409810 DEFB130AP0DP74 79 aa7.76□□□□□ -1.17
CHMP3-205ENST00000409810 SULT1A2P50226 295 aa7.76□□□□□ -1.17
CHMP3-205ENST00000409810 ZNF415Q09FC8 603 aa7.76□□□□□ -1.17
CHMP3-205ENST00000409810 DAZ2Q13117 558 aaKnown RBP7.76□□□□□ -1.17
CHMP3-205ENST00000409810 SAPCD1Q5SSQ6 148 aa7.76□□□□□ -1.17
CHMP3-205ENST00000409810 IBA57Q5T440 356 aaKnown RBP7.76□□□□□ -1.17
CHMP3-205ENST00000409810 FAM159AQ6UWV7 190 aa7.76□□□□□ -1.17
CHMP3-205ENST00000409810 PRNTQ86SH4 94 aa7.76□□□□□ -1.17
CHMP3-205ENST00000409810 FAM210BQ96KR6 192 aa7.76□□□□□ -1.17
CHMP3-205ENST00000409810 SGK494Q96LW2 274 aa7.76□□□□□ -1.17
CHMP3-205ENST00000409810 PLA2G2EQ9NZK7 142 aa7.76□□□□□ -1.17
CHMP3-205ENST00000409810 SACSQ9NZJ4 4579 aa7.76□□□□□ -1.17
CHMP3-205ENST00000409810 A0A1B0GV50 99 aa7.75□□□□□ -1.17
CHMP3-205ENST00000409810 ATP5G1P05496 136 aa7.75□□□□□ -1.17
CHMP3-205ENST00000409810 HTN3P15516 51 aa7.75□□□□□ -1.17
CHMP3-205ENST00000409810 ATP5G3P48201 142 aa7.75□□□□□ -1.17
CHMP3-205ENST00000409810 TCL1AP56279 114 aa7.75□□□□□ -1.17
CHMP3-205ENST00000409810 UBE2G1P62253 170 aa7.75□□□□□ -1.17
CHMP3-205ENST00000409810 SMUG1Q53HV7 270 aa7.75□□□□□ -1.17
CHMP3-205ENST00000409810 LINC00476Q8WZB0 136 aa7.75□□□□□ -1.17
CHMP3-205ENST00000409810 NDUFAF3Q9BU61 184 aa7.75□□□□□ -1.17
CHMP3-205ENST00000409810 MANBALQ9NQG1 85 aa7.75□□□□□ -1.17
CHMP3-205ENST00000409810 NAGKQ9UJ70 344 aa7.75□□□□□ -1.17
CHMP3-205ENST00000409810 TRAV1-1A0A0B4J248 108 aa7.74□□□□□ -1.17
CHMP3-205ENST00000409810 PAGE4O60829 102 aa7.74□□□□□ -1.17
CHMP3-205ENST00000409810 IGLV2-11P01706 119 aa7.74□□□□□ -1.17
CHMP3-205ENST00000409810 AKR1C3P42330 323 aa7.74□□□□□ -1.17
CHMP3-205ENST00000409810 MUC21Q5SSG8 566 aa7.74□□□□□ -1.17
CHMP3-205ENST00000409810 C11orf72Q8NBR9 251 aa7.74□□□□□ -1.17
CHMP3-205ENST00000409810 TVP23CQ96ET8 276 aa7.74□□□□□ -1.17
CHMP3-205ENST00000409810 FMC1Q96HJ9 113 aa7.74□□□□□ -1.17
CHMP3-205ENST00000409810 KCNS1Q96KK3 526 aa7.74□□□□□ -1.17
CHMP3-205ENST00000409810 GSN-AS1Q9NRJ2 163 aa7.74□□□□□ -1.17
CHMP3-205ENST00000409810 DNAH1Q9P2D7 4330 aa7.74□□□□□ -1.17
CHMP3-205ENST00000409810 MUC4Q99102 2169 aa7.73□□□□□ -1.17
CHMP3-205ENST00000409810 TRAV34A0A0B4J273 112 aa7.73□□□□□ -1.17
CHMP3-205ENST00000409810 LY6G6CO95867 125 aa7.73□□□□□ -1.17
CHMP3-205ENST00000409810 GCGP01275 180 aa7.73□□□□□ -1.17
CHMP3-205ENST00000409810 IFNA1P01562 189 aa7.73□□□□□ -1.17
CHMP3-205ENST00000409810 PFN1P07737 140 aaKnown RBP7.73□□□□□ -1.17
CHMP3-205ENST00000409810 TDRG1Q3Y452 100 aa7.73□□□□□ -1.17
CHMP3-205ENST00000409810 Q86TA4 180 aa7.73□□□□□ -1.17
CHMP3-205ENST00000409810 LINC00612Q8N6U2 182 aa7.73□□□□□ -1.17
CHMP3-205ENST00000409810 C8orf49Q96NF6 230 aa7.73□□□□□ -1.17
CHMP3-205ENST00000409810 TXNDC17Q9BRA2 123 aa7.73□□□□□ -1.17
CHMP3-205ENST00000409810 SDF2L1Q9HCN8 221 aa7.73□□□□□ -1.17
CHMP3-205ENST00000409810 APLNQ9ULZ1 77 aa7.73□□□□□ -1.17
CHMP3-205ENST00000409810 TRGV2A0A075B6R0 118 aa7.72□□□□□ -1.17
CHMP3-205ENST00000409810 TRGV1A0A0A0MS02 117 aa7.72□□□□□ -1.17
CHMP3-205ENST00000409810 GAGE12BA1L429 117 aa7.72□□□□□ -1.17
CHMP3-205ENST00000409810 F5H768 121 aa7.72□□□□□ -1.17
CHMP3-205ENST00000409810 GAGE7O76087 117 aa7.72□□□□□ -1.17
CHMP3-205ENST00000409810 S100A9P06702 114 aaKnown RBP7.72□□□□□ -1.17
CHMP3-205ENST00000409810 GAGE12FP0CL80 117 aa7.72□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms