RNA–Protein interactions for RNA: ENST00000409739.2

TRAF3IP1-203, Transcript of TRAF3 interacting protein 1, humanhuman

TSL 3

Gene TRAF3IP1, Length 1,070 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP1-203ENST00000409739 NOP10Q9NPE3 64 aaKnown RBP22.1■■□□□ 1.13
TRAF3IP1-203ENST00000409739 LY6G6CO95867 125 aa22.09■■□□□ 1.13
TRAF3IP1-203ENST00000409739 C1QBP02746 253 aa22.09■■□□□ 1.13
TRAF3IP1-203ENST00000409739 TCRAP04437 139 aa22.09■■□□□ 1.13
TRAF3IP1-203ENST00000409739 DEFB130BP0DP73 79 aa22.09■■□□□ 1.13
TRAF3IP1-203ENST00000409739 DEFB130AP0DP74 79 aa22.09■■□□□ 1.13
TRAF3IP1-203ENST00000409739 EIF5AP63241 154 aaKnown RBP22.09■■□□□ 1.13
TRAF3IP1-203ENST00000409739 SERTM2A0A1B0GWG4 89 aa22.08■■□□□ 1.13
TRAF3IP1-203ENST00000409739 HTN3P15516 51 aa22.08■■□□□ 1.13
TRAF3IP1-203ENST00000409739 LGALSLQ3ZCW2 172 aaPredicted RBP22.08■■□□□ 1.13
TRAF3IP1-203ENST00000409739 AKAP14Q86UN6 197 aa22.08■■□□□ 1.13
TRAF3IP1-203ENST00000409739 EIF4E3Q8N5X7 224 aaKnown RBP22.08■■□□□ 1.13
TRAF3IP1-203ENST00000409739 UMAD1C9J7I0 102 aa22.07■■□□□ 1.12
TRAF3IP1-203ENST00000409739 STOML3Q8TAV4 291 aa22.07■■□□□ 1.12
TRAF3IP1-203ENST00000409739 SNURFLB1AK76 121 aa22.06■■□□□ 1.12
TRAF3IP1-203ENST00000409739 TPT1P13693 172 aaKnown RBP22.06■■□□□ 1.12
TRAF3IP1-203ENST00000409739 UBE2G2P60604 165 aa22.06■■□□□ 1.12
TRAF3IP1-203ENST00000409739 ANXA2RQ3ZCQ2 193 aa22.06■■□□□ 1.12
TRAF3IP1-203ENST00000409739 C11orf72Q8NBR9 251 aa22.06■■□□□ 1.12
TRAF3IP1-203ENST00000409739 ZNF680Q8NEM1 530 aa22.06■■□□□ 1.12
TRAF3IP1-203ENST00000409739 TVP23CQ96ET8 276 aa22.06■■□□□ 1.12
TRAF3IP1-203ENST00000409739 EPDR1Q9UM22 224 aa22.06■■□□□ 1.12
TRAF3IP1-203ENST00000409739 CBY3A6NI87 242 aa22.05■■□□□ 1.12
TRAF3IP1-203ENST00000409739 RGS13O14921 159 aa22.05■■□□□ 1.12
TRAF3IP1-203ENST00000409739 Q6AWC8 147 aa22.05■■□□□ 1.12
TRAF3IP1-203ENST00000409739 SGK494Q96LW2 274 aa22.05■■□□□ 1.12
TRAF3IP1-203ENST00000409739 IGHV1OR15-1A0A075B7D0 117 aa22.04■■□□□ 1.12
TRAF3IP1-203ENST00000409739 LGALS9CQ6DKI2 356 aa22.04■■□□□ 1.12
TRAF3IP1-203ENST00000409739 FAM213BQ8TBF2 198 aa22.04■■□□□ 1.12
TRAF3IP1-203ENST00000409739 HYDINQ4G0P3 5121 aa22.04■■□□□ 1.12
TRAF3IP1-203ENST00000409739 FAM74A7A6NL05 159 aa22.03■■□□□ 1.12
TRAF3IP1-203ENST00000409739 K7EQM0 130 aa22.03■■□□□ 1.12
TRAF3IP1-203ENST00000409739 LINC00612Q8N6U2 182 aa22.03■■□□□ 1.12
TRAF3IP1-203ENST00000409739 CYB561D1Q8N8Q1 229 aa22.03■■□□□ 1.12
TRAF3IP1-203ENST00000409739 ATG101Q9BSB4 218 aa22.03■■□□□ 1.12
TRAF3IP1-203ENST00000409739 GSN-AS1Q9NRJ2 163 aa22.03■■□□□ 1.12
TRAF3IP1-203ENST00000409739 TP53TG3Q9ULZ0 132 aa22.03■■□□□ 1.12
TRAF3IP1-203ENST00000409739 F6UZH7 168 aa22.02■■□□□ 1.12
TRAF3IP1-203ENST00000409739 NDUFAF3Q9BU61 184 aa22.02■■□□□ 1.12
TRAF3IP1-203ENST00000409739 TREM1Q9NP99 234 aa22.02■■□□□ 1.12
TRAF3IP1-203ENST00000409739 IGLV2-11P01706 119 aa22.01■■□□□ 1.11
TRAF3IP1-203ENST00000409739 DAZ2Q13117 558 aaKnown RBP22.01■■□□□ 1.11
TRAF3IP1-203ENST00000409739 DPPA3Q6W0C5 159 aa22.01■■□□□ 1.11
TRAF3IP1-203ENST00000409739 FAM210BQ96KR6 192 aa22.01■■□□□ 1.11
TRAF3IP1-203ENST00000409739 MUC21Q5SSG8 566 aa22■■□□□ 1.11
TRAF3IP1-203ENST00000409739 TMEM75Q8N9X5 138 aa22■■□□□ 1.11
TRAF3IP1-203ENST00000409739 MBD3L1Q8WWY6 194 aa22■■□□□ 1.11
TRAF3IP1-203ENST00000409739 PSG8Q9UQ74 426 aa22■■□□□ 1.11
TRAF3IP1-203ENST00000409739 ATP5G1P05496 136 aa21.99■■□□□ 1.11
TRAF3IP1-203ENST00000409739 ATP5G3P48201 142 aa21.99■■□□□ 1.11
TRAF3IP1-203ENST00000409739 TCL1AP56279 114 aa21.99■■□□□ 1.11
TRAF3IP1-203ENST00000409739 IBA57Q5T440 356 aaKnown RBP21.99■■□□□ 1.11
TRAF3IP1-203ENST00000409739 NDFIP1Q9BT67 221 aa21.99■■□□□ 1.11
TRAF3IP1-203ENST00000409739 NKX6-2Q9C056 277 aaPredicted RBP21.99■■□□□ 1.11
TRAF3IP1-203ENST00000409739 IFNA7P01567 189 aa21.98■■□□□ 1.11
TRAF3IP1-203ENST00000409739 FLI1Q01543 452 aaPredicted RBP21.98■■□□□ 1.11
TRAF3IP1-203ENST00000409739 SFT2D1Q8WV19 159 aa21.98■■□□□ 1.11
TRAF3IP1-203ENST00000409739 VPS13DQ5THJ4 4388 aa21.97■■□□□ 1.11
TRAF3IP1-203ENST00000409739 A0A1B0GVG6 124 aa21.97■■□□□ 1.11
TRAF3IP1-203ENST00000409739 GAGE12BA1L429 117 aa21.97■■□□□ 1.11
TRAF3IP1-203ENST00000409739 GAGE7O76087 117 aa21.97■■□□□ 1.11
TRAF3IP1-203ENST00000409739 GAGE12FP0CL80 117 aa21.97■■□□□ 1.11
TRAF3IP1-203ENST00000409739 GAGE12GP0CL81 117 aa21.97■■□□□ 1.11
TRAF3IP1-203ENST00000409739 GAGE12IP0CL82 117 aa21.97■■□□□ 1.11
TRAF3IP1-203ENST00000409739 TMEM88Q6PEY1 159 aa21.97■■□□□ 1.11
TRAF3IP1-203ENST00000409739 Q6ZTI0 123 aa21.97■■□□□ 1.11
TRAF3IP1-203ENST00000409739 C8orf49Q96NF6 230 aa21.97■■□□□ 1.11
TRAF3IP1-203ENST00000409739 KLF12Q9Y4X4 402 aa21.97■■□□□ 1.11
TRAF3IP1-203ENST00000409739 PEX7O00628 323 aa21.96■■□□□ 1.11
TRAF3IP1-203ENST00000409739 TRAV21A0A0B4J279 112 aa21.95■■□□□ 1.1
TRAF3IP1-203ENST00000409739 A0A1B0GV50 99 aa21.95■■□□□ 1.1
TRAF3IP1-203ENST00000409739 FBLL1A6NHQ2 334 aaKnown RBP21.95■■□□□ 1.1
TRAF3IP1-203ENST00000409739 PRNTQ86SH4 94 aa21.95■■□□□ 1.1
TRAF3IP1-203ENST00000409739 LINC00479Q96M42 142 aa21.95■■□□□ 1.1
TRAF3IP1-203ENST00000409739 NAGKQ9UJ70 344 aa21.95■■□□□ 1.1
TRAF3IP1-203ENST00000409739 ARL2-SNX15V9GYD0 113 aa21.95■■□□□ 1.1
TRAF3IP1-203ENST00000409739 MUC4Q99102 2169 aa21.94■■□□□ 1.1
TRAF3IP1-203ENST00000409739 TRAV34A0A0B4J273 112 aa21.94■■□□□ 1.1
TRAF3IP1-203ENST00000409739 F5H768 121 aa21.94■■□□□ 1.1
TRAF3IP1-203ENST00000409739 ZNF415Q09FC8 603 aa21.94■■□□□ 1.1
TRAF3IP1-203ENST00000409739 FAM159AQ6UWV7 190 aa21.94■■□□□ 1.1
TRAF3IP1-203ENST00000409739 HIST1H2BAQ96A08 127 aa21.94■■□□□ 1.1
TRAF3IP1-203ENST00000409739 KMT2AQ03164 3969 aa21.94■■□□□ 1.1
TRAF3IP1-203ENST00000409739 H2AFB1P0C5Y9 115 aa21.93■■□□□ 1.1
TRAF3IP1-203ENST00000409739 TDRG1Q3Y452 100 aa21.93■■□□□ 1.1
TRAF3IP1-203ENST00000409739 EIF5AL1Q6IS14 154 aaKnown RBP21.93■■□□□ 1.1
TRAF3IP1-203ENST00000409739 SLC51BQ86UW2 128 aa21.93■■□□□ 1.1
TRAF3IP1-203ENST00000409739 C9orf62Q8N4C0 152 aa21.93■■□□□ 1.1
TRAF3IP1-203ENST00000409739 CST9LP1Q5W188 147 aa21.92■■□□□ 1.1
TRAF3IP1-203ENST00000409739 TRGV1A0A0A0MS02 117 aa21.91■■□□□ 1.1
TRAF3IP1-203ENST00000409739 SPINK4O60575 86 aa21.91■■□□□ 1.1
TRAF3IP1-203ENST00000409739 PAGE4O60829 102 aa21.91■■□□□ 1.1
TRAF3IP1-203ENST00000409739 ZNF80P51504 273 aaPredicted RBP21.91■■□□□ 1.1
TRAF3IP1-203ENST00000409739 TMEM183BQ1AE95 376 aa21.91■■□□□ 1.1
TRAF3IP1-203ENST00000409739 ZFP69Q49AA0 526 aa21.91■■□□□ 1.1
TRAF3IP1-203ENST00000409739 TMEM183AQ8IXX5 376 aa21.91■■□□□ 1.1
TRAF3IP1-203ENST00000409739 MDFICQ9P1T7 246 aa21.91■■□□□ 1.1
TRAF3IP1-203ENST00000409739 TRGV11A0A075B6L2 103 aa21.9■■□□□ 1.1
TRAF3IP1-203ENST00000409739 PPT1P50897 306 aa21.9■■□□□ 1.1
TRAF3IP1-203ENST00000409739 RAB5CP51148 216 aa21.9■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms