RNA–Protein interactions for RNA: ENST00000409486.6

PPM1B-207, Transcript of protein phosphatase, Mg2+/Mn2+ dependent 1B, humanhuman

TSL 1 (best)

Gene PPM1B, Length 1,481 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPM1B-207ENST00000409486 STOML3Q8TAV4 291 aa13.61□□□□□ -0.23
PPM1B-207ENST00000409486 RNASE8Q8TDE3 154 aaKnown RBP13.61□□□□□ -0.23
PPM1B-207ENST00000409486 TP53TG3Q9ULZ0 132 aa13.61□□□□□ -0.23
PPM1B-207ENST00000409486 TEX48A0A1B0GUV7 120 aa13.6□□□□□ -0.23
PPM1B-207ENST00000409486 SNURFLB1AK76 121 aa13.6□□□□□ -0.23
PPM1B-207ENST00000409486 TCRAP04437 139 aa13.6□□□□□ -0.23
PPM1B-207ENST00000409486 PYGO2Q9BRQ0 406 aa13.6□□□□□ -0.23
PPM1B-207ENST00000409486 EPDR1Q9UM22 224 aa13.6□□□□□ -0.23
PPM1B-207ENST00000409486 TIMM8BQ9Y5J9 83 aaPredicted RBP13.6□□□□□ -0.23
PPM1B-207ENST00000409486 TRAV34A0A0B4J273 112 aa13.59□□□□□ -0.23
PPM1B-207ENST00000409486 K7EQM0 130 aa13.59□□□□□ -0.23
PPM1B-207ENST00000409486 ZNF324O75467 553 aaPredicted RBP13.59□□□□□ -0.23
PPM1B-207ENST00000409486 SUN5Q8TC36 379 aa13.59□□□□□ -0.23
PPM1B-207ENST00000409486 TREM1Q9NP99 234 aa13.59□□□□□ -0.23
PPM1B-207ENST00000409486 GSN-AS1Q9NRJ2 163 aa13.59□□□□□ -0.23
PPM1B-207ENST00000409486 IGHV4-4A0A075B6R2 117 aa13.58□□□□□ -0.24
PPM1B-207ENST00000409486 LINC00479Q96M42 142 aa13.58□□□□□ -0.24
PPM1B-207ENST00000409486 C8orf49Q96NF6 230 aa13.58□□□□□ -0.24
PPM1B-207ENST00000409486 NDFIP1Q9BT67 221 aa13.58□□□□□ -0.24
PPM1B-207ENST00000409486 A0A1W2PRE2 83 aa13.57□□□□□ -0.24
PPM1B-207ENST00000409486 GAGE12BA1L429 117 aa13.57□□□□□ -0.24
PPM1B-207ENST00000409486 FAM74A7A6NL05 159 aa13.57□□□□□ -0.24
PPM1B-207ENST00000409486 LYRM9A8MSI8 78 aa13.57□□□□□ -0.24
PPM1B-207ENST00000409486 UMAD1C9J7I0 102 aa13.57□□□□□ -0.24
PPM1B-207ENST00000409486 GAGE7O76087 117 aa13.57□□□□□ -0.24
PPM1B-207ENST00000409486 GAGE12FP0CL80 117 aa13.57□□□□□ -0.24
PPM1B-207ENST00000409486 GAGE12GP0CL81 117 aa13.57□□□□□ -0.24
PPM1B-207ENST00000409486 GAGE12IP0CL82 117 aa13.57□□□□□ -0.24
PPM1B-207ENST00000409486 ZNF493Q6ZR52 646 aa13.57□□□□□ -0.24
PPM1B-207ENST00000409486 C9orf62Q8N4C0 152 aa13.57□□□□□ -0.24
PPM1B-207ENST00000409486 EIF4E3Q8N5X7 224 aaKnown RBP13.57□□□□□ -0.24
PPM1B-207ENST00000409486 CYB561D1Q8N8Q1 229 aa13.57□□□□□ -0.24
PPM1B-207ENST00000409486 TVP23CQ96ET8 276 aa13.57□□□□□ -0.24
PPM1B-207ENST00000409486 PSG8Q9UQ74 426 aa13.57□□□□□ -0.24
PPM1B-207ENST00000409486 IGHV1OR15-1A0A075B7D0 117 aa13.56□□□□□ -0.24
PPM1B-207ENST00000409486 H2AFB1P0C5Y9 115 aa13.56□□□□□ -0.24
PPM1B-207ENST00000409486 BOLA1Q9Y3E2 137 aa13.56□□□□□ -0.24
PPM1B-207ENST00000409486 F5H768 121 aa13.55□□□□□ -0.24
PPM1B-207ENST00000409486 PEX7O00628 323 aa13.55□□□□□ -0.24
PPM1B-207ENST00000409486 PAGE4O60829 102 aa13.55□□□□□ -0.24
PPM1B-207ENST00000409486 NMBP08949 121 aa13.55□□□□□ -0.24
PPM1B-207ENST00000409486 ATP5G3P48201 142 aa13.55□□□□□ -0.24
PPM1B-207ENST00000409486 LINC00476Q8WZB0 136 aa13.55□□□□□ -0.24
PPM1B-207ENST00000409486 ATG101Q9BSB4 218 aa13.55□□□□□ -0.24
PPM1B-207ENST00000409486 KLF12Q9Y4X4 402 aa13.55□□□□□ -0.24
PPM1B-207ENST00000409486 FLI1Q01543 452 aaPredicted RBP13.55□□□□□ -0.24
PPM1B-207ENST00000409486 TMEM183BQ1AE95 376 aa13.55□□□□□ -0.24
PPM1B-207ENST00000409486 TMEM183AQ8IXX5 376 aa13.55□□□□□ -0.24
PPM1B-207ENST00000409486 TRGV1A0A0A0MS02 117 aa13.54□□□□□ -0.24
PPM1B-207ENST00000409486 SERTM2A0A1B0GWG4 89 aa13.54□□□□□ -0.24
PPM1B-207ENST00000409486 FAM159AQ6UWV7 190 aa13.54□□□□□ -0.24
PPM1B-207ENST00000409486 SLC51BQ86UW2 128 aa13.54□□□□□ -0.24
PPM1B-207ENST00000409486 ZNF680Q8NEM1 530 aa13.54□□□□□ -0.24
PPM1B-207ENST00000409486 APLNQ9ULZ1 77 aa13.54□□□□□ -0.24
PPM1B-207ENST00000409486 EIF5AL1Q6IS14 154 aaKnown RBP13.53□□□□□ -0.24
PPM1B-207ENST00000409486 TMEM88Q6PEY1 159 aa13.53□□□□□ -0.24
PPM1B-207ENST00000409486 DPPA3Q6W0C5 159 aa13.53□□□□□ -0.24
PPM1B-207ENST00000409486 Q6ZTI0 123 aa13.53□□□□□ -0.24
PPM1B-207ENST00000409486 NDUFAF3Q9BU61 184 aa13.53□□□□□ -0.24
PPM1B-207ENST00000409486 MRPL16Q9NX20 251 aaKnown RBP13.53□□□□□ -0.24
PPM1B-207ENST00000409486 LENEPQ9Y5L5 61 aa13.53□□□□□ -0.24
PPM1B-207ENST00000409486 PLECQ15149 4684 aaKnown RBP13.52□□□□□ -0.24
PPM1B-207ENST00000409486 DYNC2H1Q8NCM8 4307 aaKnown RBP13.52□□□□□ -0.24
PPM1B-207ENST00000409486 TRBV7-9A0A0J9YWB2 115 aa13.52□□□□□ -0.25
PPM1B-207ENST00000409486 GCGP01275 180 aa13.52□□□□□ -0.25
PPM1B-207ENST00000409486 IGLV2-11P01706 119 aa13.52□□□□□ -0.25
PPM1B-207ENST00000409486 PPT1P50897 306 aa13.52□□□□□ -0.25
PPM1B-207ENST00000409486 ARL6IP6Q8N6S5 226 aa13.52□□□□□ -0.25
PPM1B-207ENST00000409486 TMEM75Q8N9X5 138 aa13.52□□□□□ -0.25
PPM1B-207ENST00000409486 C11orf72Q8NBR9 251 aa13.52□□□□□ -0.25
PPM1B-207ENST00000409486 MBD3L1Q8WWY6 194 aa13.52□□□□□ -0.25
PPM1B-207ENST00000409486 GNG13Q9P2W3 67 aa13.52□□□□□ -0.25
PPM1B-207ENST00000409486 TRAV21A0A0B4J279 112 aa13.51□□□□□ -0.25
PPM1B-207ENST00000409486 ATP5G1P05496 136 aa13.51□□□□□ -0.25
PPM1B-207ENST00000409486 ZNF80P51504 273 aaPredicted RBP13.51□□□□□ -0.25
PPM1B-207ENST00000409486 ZNF415Q09FC8 603 aa13.51□□□□□ -0.25
PPM1B-207ENST00000409486 OR5I1Q13606 314 aa13.51□□□□□ -0.25
PPM1B-207ENST00000409486 Q6AWC8 147 aa13.51□□□□□ -0.25
PPM1B-207ENST00000409486 LYSTQ99698 3801 aa13.5□□□□□ -0.25
PPM1B-207ENST00000409486 TRGV2A0A075B6R0 118 aa13.5□□□□□ -0.25
PPM1B-207ENST00000409486 GNRH2O43555 120 aa13.5□□□□□ -0.25
PPM1B-207ENST00000409486 UBE2G1P62253 170 aa13.5□□□□□ -0.25
PPM1B-207ENST00000409486 CCL20P78556 96 aa13.5□□□□□ -0.25
PPM1B-207ENST00000409486 ANXA2RQ3ZCQ2 193 aa13.5□□□□□ -0.25
PPM1B-207ENST00000409486 MDFICQ9P1T7 246 aa13.5□□□□□ -0.25
PPM1B-207ENST00000409486 ARL2-SNX15V9GYD0 113 aa13.5□□□□□ -0.25
PPM1B-207ENST00000409486 IGHV3-53P01767 116 aa13.49□□□□□ -0.25
PPM1B-207ENST00000409486 AKR1C3P42330 323 aa13.49□□□□□ -0.25
PPM1B-207ENST00000409486 SMUG1Q53HV7 270 aa13.49□□□□□ -0.25
PPM1B-207ENST00000409486 Q86TA4 180 aa13.49□□□□□ -0.25
PPM1B-207ENST00000409486 NKX6-2Q9C056 277 aaPredicted RBP13.49□□□□□ -0.25
PPM1B-207ENST00000409486 RYR3Q15413 4870 aa13.49□□□□□ -0.25
PPM1B-207ENST00000409486 ALMS1Q8TCU4 4167 aa13.49□□□□□ -0.25
PPM1B-207ENST00000409486 SCO2A0A1W2PP80 73 aa13.48□□□□□ -0.25
PPM1B-207ENST00000409486 SULT1A2P50226 295 aa13.48□□□□□ -0.25
PPM1B-207ENST00000409486 TCL1AP56279 114 aa13.48□□□□□ -0.25
PPM1B-207ENST00000409486 ALKAL2Q6UX46 152 aa13.48□□□□□ -0.25
PPM1B-207ENST00000409486 LINC00467Q9BRT7 94 aa13.48□□□□□ -0.25
PPM1B-207ENST00000409486 TRGV11A0A075B6L2 103 aa13.48□□□□□ -0.25
PPM1B-207ENST00000409486 A0A0J9YY99 117 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms