RNA–Protein interactions for RNA: ENST00000409357.5

NIF3L1-204, Transcript of NGG1 interacting factor 3 like 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene NIF3L1, Length 1,679 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-204ENST00000409357 OR4C13Q8NGP0 309 aa8.37□□□□□ -1.07
NIF3L1-204ENST00000409357 TIMM8BQ9Y5J9 83 aaPredicted RBP8.37□□□□□ -1.07
NIF3L1-204ENST00000409357 MYMXA0A1B0GTQ4 84 aa8.36□□□□□ -1.07
NIF3L1-204ENST00000409357 AVPP01185 164 aa8.36□□□□□ -1.07
NIF3L1-204ENST00000409357 RBP4P02753 201 aa8.36□□□□□ -1.07
NIF3L1-204ENST00000409357 GRPP07492 148 aa8.36□□□□□ -1.07
NIF3L1-204ENST00000409357 PRDX2P32119 198 aa8.36□□□□□ -1.07
NIF3L1-204ENST00000409357 UBE2D1P51668 147 aa8.36□□□□□ -1.07
NIF3L1-204ENST00000409357 GAGE2BQ13066 116 aa8.36□□□□□ -1.07
NIF3L1-204ENST00000409357 GAGE2EQ4V326 116 aa8.36□□□□□ -1.07
NIF3L1-204ENST00000409357 SPXQ9BT56 116 aa8.36□□□□□ -1.07
NIF3L1-204ENST00000409357 SPANXCQ9NY87 97 aa8.36□□□□□ -1.07
NIF3L1-204ENST00000409357 GAGE2DQ9UEU5 116 aa8.36□□□□□ -1.07
NIF3L1-204ENST00000409357 WNT9BO14905 357 aa8.35□□□□□ -1.07
NIF3L1-204ENST00000409357 FCN3O75636 299 aa8.35□□□□□ -1.07
NIF3L1-204ENST00000409357 BRI3O95415 125 aa8.35□□□□□ -1.07
NIF3L1-204ENST00000409357 IGHV3-9P01782 118 aa8.35□□□□□ -1.07
NIF3L1-204ENST00000409357 SAA2P0DJI9 122 aaPredicted RBP8.35□□□□□ -1.07
NIF3L1-204ENST00000409357 PLNP26678 52 aa8.35□□□□□ -1.07
NIF3L1-204ENST00000409357 FOXG1P55316 489 aaPredicted RBP8.35□□□□□ -1.07
NIF3L1-204ENST00000409357 MLANAQ16655 118 aa8.35□□□□□ -1.07
NIF3L1-204ENST00000409357 ZC2HC1BQ5TFG8 222 aa8.35□□□□□ -1.07
NIF3L1-204ENST00000409357 TUSC5Q8IXB3 177 aa8.35□□□□□ -1.07
NIF3L1-204ENST00000409357 CD177Q8N6Q3 437 aa8.35□□□□□ -1.07
NIF3L1-204ENST00000409357 TMEM167AQ8TBQ9 72 aa8.35□□□□□ -1.07
NIF3L1-204ENST00000409357 NPIPB3Q92617 1050 aa8.35□□□□□ -1.07
NIF3L1-204ENST00000409357 HIST1H4GQ99525 98 aa8.35□□□□□ -1.07
NIF3L1-204ENST00000409357 HINT2Q9BX68 163 aa8.35□□□□□ -1.07
NIF3L1-204ENST00000409357 HIF1ANQ9NWT6 349 aa8.35□□□□□ -1.07
NIF3L1-204ENST00000409357 CALYQ9NYX4 217 aa8.35□□□□□ -1.07
NIF3L1-204ENST00000409357 ZANQ9Y493 2812 aa8.34□□□□□ -1.07
NIF3L1-204ENST00000409357 TRAV12-1A0A0B4J245 112 aa8.34□□□□□ -1.07
NIF3L1-204ENST00000409357 A8MWV9 139 aa8.34□□□□□ -1.07
NIF3L1-204ENST00000409357 IFITM1P13164 125 aa8.34□□□□□ -1.07
NIF3L1-204ENST00000409357 FBXL19-AS1Q494R0 122 aa8.34□□□□□ -1.07
NIF3L1-204ENST00000409357 C1orf229Q6ZS94 237 aaPredicted RBP8.34□□□□□ -1.07
NIF3L1-204ENST00000409357 MDP1Q86V88 176 aa8.34□□□□□ -1.07
NIF3L1-204ENST00000409357 SMIM20Q8N5G0 67 aa8.34□□□□□ -1.07
NIF3L1-204ENST00000409357 RNASE6Q93091 150 aaKnown RBP8.34□□□□□ -1.07
NIF3L1-204ENST00000409357 CNFNQ9BYD5 112 aa8.34□□□□□ -1.07
NIF3L1-204ENST00000409357 NCBP2LA6PVI3 153 aaKnown RBP8.34□□□□□ -1.08
NIF3L1-204ENST00000409357 NPYP01303 97 aa8.34□□□□□ -1.08
NIF3L1-204ENST00000409357 CNEP1R1Q8N9A8 125 aa8.34□□□□□ -1.08
NIF3L1-204ENST00000409357 OR11H6Q8NGC7 330 aa8.34□□□□□ -1.08
NIF3L1-204ENST00000409357 LINC01560Q8TB33 94 aa8.34□□□□□ -1.08
NIF3L1-204ENST00000409357 MDFICQ9P1T7 246 aa8.34□□□□□ -1.08
NIF3L1-204ENST00000409357 NIPBLQ6KC79 2804 aaeCLIP8.33□□□□□ -1.08
NIF3L1-204ENST00000409357 LOC389332A0A1B0GUA5 103 aa8.33□□□□□ -1.08
NIF3L1-204ENST00000409357 PRSS1P07477 247 aa8.33□□□□□ -1.08
NIF3L1-204ENST00000409357 CKS2P33552 79 aa8.33□□□□□ -1.08
NIF3L1-204ENST00000409357 C17orf58Q2M2W7 97 aa8.33□□□□□ -1.08
NIF3L1-204ENST00000409357 MAPKAPK5-AS1Q8N8E1 139 aa8.33□□□□□ -1.08
NIF3L1-204ENST00000409357 FBXL15Q9H469 300 aa8.33□□□□□ -1.08
NIF3L1-204ENST00000409357 YAE1D1Q9NRH1 226 aa8.33□□□□□ -1.08
NIF3L1-204ENST00000409357 MED13LQ71F56 2210 aa8.33□□□□□ -1.08
NIF3L1-204ENST00000409357 PRRC2AP48634 2157 aaKnown RBP8.33□□□□□ -1.08
NIF3L1-204ENST00000409357 SRRM5B3KS81 715 aa8.32□□□□□ -1.08
NIF3L1-204ENST00000409357 SAA1P0DJI8 122 aaPredicted RBP8.32□□□□□ -1.08
NIF3L1-204ENST00000409357 MYOD1P15172 320 aa8.32□□□□□ -1.08
NIF3L1-204ENST00000409357 TTC32Q5I0X7 151 aa8.32□□□□□ -1.08
NIF3L1-204ENST00000409357 ZNF474Q6S9Z5 364 aaPredicted RBP8.32□□□□□ -1.08
NIF3L1-204ENST00000409357 C22orf34Q6ZV56 151 aa8.32□□□□□ -1.08
NIF3L1-204ENST00000409357 PRNTQ86SH4 94 aa8.32□□□□□ -1.08
NIF3L1-204ENST00000409357 GTSCR1Q86UQ5 136 aa8.32□□□□□ -1.08
NIF3L1-204ENST00000409357 AMN1Q8IY45 258 aa8.32□□□□□ -1.08
NIF3L1-204ENST00000409357 Q8N8P6 123 aa8.32□□□□□ -1.08
NIF3L1-204ENST00000409357 DCTN5Q9BTE1 182 aa8.32□□□□□ -1.08
NIF3L1-204ENST00000409357 RAB1BQ9H0U4 201 aa8.32□□□□□ -1.08
NIF3L1-204ENST00000409357 OBP2BQ9NPH6 170 aa8.32□□□□□ -1.08
NIF3L1-204ENST00000409357 A0A1W2PPR1 153 aa8.31□□□□□ -1.08
NIF3L1-204ENST00000409357 SNCGO76070 127 aa8.31□□□□□ -1.08
NIF3L1-204ENST00000409357 LEPP41159 167 aa8.31□□□□□ -1.08
NIF3L1-204ENST00000409357 CRIP1P50238 77 aa8.31□□□□□ -1.08
NIF3L1-204ENST00000409357 TNP2Q05952 138 aa8.31□□□□□ -1.08
NIF3L1-204ENST00000409357 FAM27E3Q08E93 113 aa8.31□□□□□ -1.08
NIF3L1-204ENST00000409357 LYZL1Q6UWQ5 148 aa8.31□□□□□ -1.08
NIF3L1-204ENST00000409357 OR10J6PQ8NGY7 276 aa8.31□□□□□ -1.08
NIF3L1-204ENST00000409357 AJUBAQ96IF1 538 aa8.31□□□□□ -1.08
NIF3L1-204ENST00000409357 SGK494Q96LW2 274 aa8.31□□□□□ -1.08
NIF3L1-204ENST00000409357 CITED2Q99967 270 aaPredicted RBP8.31□□□□□ -1.08
NIF3L1-204ENST00000409357 IGKV1D-17A0A075B6S4 117 aa8.3□□□□□ -1.08
NIF3L1-204ENST00000409357 WIPF1O43516 503 aa8.3□□□□□ -1.08
NIF3L1-204ENST00000409357 IGLC6P0CF74 106 aa8.3□□□□□ -1.08
NIF3L1-204ENST00000409357 DIAPH2-AS1Q14236 149 aa8.3□□□□□ -1.08
NIF3L1-204ENST00000409357 ALKBH6Q3KRA9 238 aa8.3□□□□□ -1.08
NIF3L1-204ENST00000409357 PRR31Q5SQ13 230 aa8.3□□□□□ -1.08
NIF3L1-204ENST00000409357 ZNF826PQ6ZT77 177 aa8.3□□□□□ -1.08
NIF3L1-204ENST00000409357 ZNF833PQ6ZTB9 187 aa8.3□□□□□ -1.08
NIF3L1-204ENST00000409357 GOLT1AQ6ZVE7 132 aa8.3□□□□□ -1.08
NIF3L1-204ENST00000409357 PPP1R27Q86WC6 154 aa8.3□□□□□ -1.08
NIF3L1-204ENST00000409357 KLF14Q8TD94 323 aaPredicted RBP8.3□□□□□ -1.08
NIF3L1-204ENST00000409357 GLMPQ8WWB7 406 aa8.3□□□□□ -1.08
NIF3L1-204ENST00000409357 CADP27708 2225 aa8.3□□□□□ -1.08
NIF3L1-204ENST00000409357 TLN2Q9Y4G6 2542 aa8.3□□□□□ -1.08
NIF3L1-204ENST00000409357 IGLV2-18A0A075B6J9 118 aa8.3□□□□□ -1.08
NIF3L1-204ENST00000409357 A0A1W2PPI3 338 aa8.3□□□□□ -1.08
NIF3L1-204ENST00000409357 SCGB1C2P0DMR2 95 aa8.3□□□□□ -1.08
NIF3L1-204ENST00000409357 PLGLAQ15195 96 aa8.3□□□□□ -1.08
NIF3L1-204ENST00000409357 SPRNQ5BIV9 151 aa8.3□□□□□ -1.08
NIF3L1-204ENST00000409357 MYOZ3Q8TDC0 251 aa8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms