RNA–Protein interactions for RNA: ENST00000409333.1

SSB-202, Transcript of Sjogren syndrome antigen B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSB, Length 1,782 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSB-202ENST00000409333 STHQ8IWL8 128 aa12.41□□□□□ -0.42
SSB-202ENST00000409333 C7orf77A4D0Y5 90 aa12.41□□□□□ -0.42
SSB-202ENST00000409333 CRISP2P16562 243 aa12.41□□□□□ -0.42
SSB-202ENST00000409333 FXYD7P58549 80 aa12.41□□□□□ -0.42
SSB-202ENST00000409333 EGFEM1PQ0D2K5 195 aa12.41□□□□□ -0.42
SSB-202ENST00000409333 SPINK13Q1W4C9 94 aa12.41□□□□□ -0.42
SSB-202ENST00000409333 RNF212Q495C1 297 aa12.41□□□□□ -0.42
SSB-202ENST00000409333 TRPT1Q86TN4 253 aaKnown RBP12.41□□□□□ -0.42
SSB-202ENST00000409333 SFRP2Q96HF1 295 aa12.41□□□□□ -0.42
SSB-202ENST00000409333 ODF3Q96PU9 254 aa12.41□□□□□ -0.42
SSB-202ENST00000409333 TRBV7-9A0A0J9YWB2 115 aa12.4□□□□□ -0.42
SSB-202ENST00000409333 GPX1P07203 203 aa12.4□□□□□ -0.42
SSB-202ENST00000409333 ERVFC1-1P60608 527 aa12.4□□□□□ -0.42
SSB-202ENST00000409333 SAMD5Q5TGI4 173 aa12.4□□□□□ -0.42
SSB-202ENST00000409333 Q6ZQT7 251 aa12.4□□□□□ -0.42
SSB-202ENST00000409333 Q8N1Y9 231 aa12.4□□□□□ -0.42
SSB-202ENST00000409333 DNHD1Q96M86 4753 aa12.39□□□□□ -0.43
SSB-202ENST00000409333 KLLNB2CW77 178 aa12.39□□□□□ -0.43
SSB-202ENST00000409333 BTN1A1Q13410 526 aa12.39□□□□□ -0.43
SSB-202ENST00000409333 RHEBQ15382 184 aa12.39□□□□□ -0.43
SSB-202ENST00000409333 IBA57Q5T440 356 aaKnown RBP12.39□□□□□ -0.43
SSB-202ENST00000409333 RPS10P5Q9NQ39 176 aa12.39□□□□□ -0.43
SSB-202ENST00000409333 TRAV12-2A0A075B6T6 113 aa12.38□□□□□ -0.43
SSB-202ENST00000409333 C19orf71A6NCJ1 209 aa12.38□□□□□ -0.43
SSB-202ENST00000409333 B4DEV8 164 aa12.38□□□□□ -0.43
SSB-202ENST00000409333 LEPP41159 167 aa12.38□□□□□ -0.43
SSB-202ENST00000409333 NUDT10Q8NFP7 164 aa12.38□□□□□ -0.43
SSB-202ENST00000409333 NUDT11Q96G61 164 aa12.38□□□□□ -0.43
SSB-202ENST00000409333 BIN3Q9NQY0 253 aa12.38□□□□□ -0.43
SSB-202ENST00000409333 SH2D1AO60880 128 aa12.38□□□□□ -0.43
SSB-202ENST00000409333 RNASE4P34096 147 aaKnown RBP12.38□□□□□ -0.43
SSB-202ENST00000409333 CDKN1BP46527 198 aa12.38□□□□□ -0.43
SSB-202ENST00000409333 FAM162BQ5T6X4 162 aa12.38□□□□□ -0.43
SSB-202ENST00000409333 CLUHP3Q96NS8 147 aa12.38□□□□□ -0.43
SSB-202ENST00000409333 NOTCH1P46531 2555 aa12.37□□□□□ -0.43
SSB-202ENST00000409333 SCO1O75880 301 aa12.37□□□□□ -0.43
SSB-202ENST00000409333 RPL35AP18077 110 aaKnown RBP12.37□□□□□ -0.43
SSB-202ENST00000409333 GFI1BQ5VTD9 330 aa12.37□□□□□ -0.43
SSB-202ENST00000409333 FAM231DQ6ZW35 169 aa12.37□□□□□ -0.43
SSB-202ENST00000409333 OR10G8Q8NGN5 311 aa12.37□□□□□ -0.43
SSB-202ENST00000409333 PFN1P07737 140 aaKnown RBP12.36□□□□□ -0.43
SSB-202ENST00000409333 TSPOP30536 169 aa12.36□□□□□ -0.43
SSB-202ENST00000409333 SRD5A3Q9H8P0 318 aa12.36□□□□□ -0.43
SSB-202ENST00000409333 OSTCQ9NRP0 149 aa12.36□□□□□ -0.43
SSB-202ENST00000409333 MGAM2Q2M2H8 2515 aa12.36□□□□□ -0.43
SSB-202ENST00000409333 CRXO43186 299 aaPredicted RBP12.35□□□□□ -0.43
SSB-202ENST00000409333 P01737 135 aa12.35□□□□□ -0.43
SSB-202ENST00000409333 MT-ND4LP03901 98 aa12.35□□□□□ -0.43
SSB-202ENST00000409333 RPL19P84098 196 aaKnown RBP12.35□□□□□ -0.43
SSB-202ENST00000409333 C15orf54Q8N8G6 183 aa12.35□□□□□ -0.43
SSB-202ENST00000409333 DAZAP1Q96EP5 407 aaKnown RBP12.35□□□□□ -0.43
SSB-202ENST00000409333 V9GYV3 84 aa12.35□□□□□ -0.43
SSB-202ENST00000409333 TRAV12-3A0A0B4J271 114 aa12.35□□□□□ -0.43
SSB-202ENST00000409333 C7orf71A4D174 169 aa12.35□□□□□ -0.43
SSB-202ENST00000409333 FABP5P3A8MUU1 101 aa12.35□□□□□ -0.43
SSB-202ENST00000409333 ZNF705GA8MUZ8 300 aaPredicted RBP12.35□□□□□ -0.43
SSB-202ENST00000409333 CA1P00915 261 aaPredicted RBP12.35□□□□□ -0.43
SSB-202ENST00000409333 Q6AWC8 147 aa12.35□□□□□ -0.43
SSB-202ENST00000409333 ANAPC16Q96DE5 110 aa12.35□□□□□ -0.43
SSB-202ENST00000409333 C11orf21Q9P2W6 132 aa12.35□□□□□ -0.43
SSB-202ENST00000409333 NBEAL1Q6ZS30 2694 aa12.35□□□□□ -0.43
SSB-202ENST00000409333 A0A087WWC5 75 aa12.34□□□□□ -0.43
SSB-202ENST00000409333 GATCO43716 136 aaKnown RBP12.34□□□□□ -0.43
SSB-202ENST00000409333 H7BYZ3 331 aa12.33□□□□□ -0.44
SSB-202ENST00000409333 RBMY1A1P0DJD3 496 aaKnown RBP12.33□□□□□ -0.44
SSB-202ENST00000409333 RBMY1CP0DJD4 496 aa12.33□□□□□ -0.44
SSB-202ENST00000409333 RBMY1FQ15415 496 aaKnown RBP12.33□□□□□ -0.44
SSB-202ENST00000409333 RPP21Q9H633 154 aaKnown RBP12.33□□□□□ -0.44
SSB-202ENST00000409333 XCL2Q9UBD3 114 aa12.33□□□□□ -0.44
SSB-202ENST00000409333 TRAV21A0A0B4J279 112 aa12.33□□□□□ -0.44
SSB-202ENST00000409333 ZNF324O75467 553 aaPredicted RBP12.33□□□□□ -0.44
SSB-202ENST00000409333 ZMAT5Q9UDW3 170 aaKnown RBP12.33□□□□□ -0.44
SSB-202ENST00000409333 TMSB15BA0A087X1C1 80 aa12.32□□□□□ -0.44
SSB-202ENST00000409333 PPP1R2P9O14990 202 aa12.32□□□□□ -0.44
SSB-202ENST00000409333 GIG44P09565 113 aaPredicted RBP12.32□□□□□ -0.44
SSB-202ENST00000409333 TMEM88Q6PEY1 159 aa12.32□□□□□ -0.44
SSB-202ENST00000409333 CBLN2Q8IUK8 224 aa12.32□□□□□ -0.44
SSB-202ENST00000409333 OR2D3Q8NGH3 330 aa12.32□□□□□ -0.44
SSB-202ENST00000409333 CTDSP1Q9GZU7 261 aa12.32□□□□□ -0.44
SSB-202ENST00000409333 NAGKQ9UJ70 344 aa12.32□□□□□ -0.44
SSB-202ENST00000409333 IGKV3D-20A0A0C4DH25 116 aa12.31□□□□□ -0.44
SSB-202ENST00000409333 ORM1P02763 201 aa12.31□□□□□ -0.44
SSB-202ENST00000409333 NUTF2P61970 127 aaKnown RBP12.31□□□□□ -0.44
SSB-202ENST00000409333 MUC21Q5SSG8 566 aa12.31□□□□□ -0.44
SSB-202ENST00000409333 TMEM242Q9NWH2 141 aa12.31□□□□□ -0.44
SSB-202ENST00000409333 TMEM189A5PLL7 270 aa12.3□□□□□ -0.44
SSB-202ENST00000409333 IGHV4-30-4P0DP06 118 aa12.3□□□□□ -0.44
SSB-202ENST00000409333 GZMBP10144 247 aa12.3□□□□□ -0.44
SSB-202ENST00000409333 LINC01559Q495D7 138 aa12.3□□□□□ -0.44
SSB-202ENST00000409333 MORN3Q6PF18 240 aaPredicted RBP12.3□□□□□ -0.44
SSB-202ENST00000409333 ZNF575Q86XF7 245 aa12.3□□□□□ -0.44
SSB-202ENST00000409333 TUBA4BQ9H853 241 aa12.3□□□□□ -0.44
SSB-202ENST00000409333 INSP01308 110 aa12.29□□□□□ -0.44
SSB-202ENST00000409333 ANXA2RQ3ZCQ2 193 aa12.29□□□□□ -0.44
SSB-202ENST00000409333 LOC102724200A0A096LPH7 203 aaPredicted RBP12.28□□□□□ -0.44
SSB-202ENST00000409333 AMBPP02760 352 aa12.28□□□□□ -0.44
SSB-202ENST00000409333 PRB2P02812 416 aaPredicted RBP12.28□□□□□ -0.44
SSB-202ENST00000409333 TCL1AP56279 114 aa12.28□□□□□ -0.44
SSB-202ENST00000409333 CT83Q5H943 113 aa12.28□□□□□ -0.44
SSB-202ENST00000409333 IL36BQ9NZH7 164 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms