RNA–Protein interactions for RNA: ENST00000409076.6

SNX13-201, Transcript of sorting nexin 13, humanhuman

TSL 2

Gene SNX13, Length 3,818 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-201ENST00000409076 ZNF256Q9Y2P7 627 aaPredicted RBP6.52□□□□□ -1.37
SNX13-201ENST00000409076 RAXQ9Y2V3 346 aa6.52□□□□□ -1.37
SNX13-201ENST00000409076 TRAV30A0A087WSZ9 112 aa6.51□□□□□ -1.37
SNX13-201ENST00000409076 A0A087WWL8 130 aa6.51□□□□□ -1.37
SNX13-201ENST00000409076 TMEM8BA6NDV4 472 aa6.51□□□□□ -1.37
SNX13-201ENST00000409076 THAP8Q8NA92 274 aa6.51□□□□□ -1.37
SNX13-201ENST00000409076 MYOZ3Q8TDC0 251 aa6.51□□□□□ -1.37
SNX13-201ENST00000409076 CFHR4Q92496 578 aa6.51□□□□□ -1.37
SNX13-201ENST00000409076 SPOCK3Q9BQ16 436 aa6.51□□□□□ -1.37
SNX13-201ENST00000409076 I3L2K1 104 aa6.51□□□□□ -1.37
SNX13-201ENST00000409076 CEACAM3P40198 252 aa6.51□□□□□ -1.37
SNX13-201ENST00000409076 A0A0U1RRA0 63 aa6.51□□□□□ -1.37
SNX13-201ENST00000409076 C19orf71A6NCJ1 209 aa6.51□□□□□ -1.37
SNX13-201ENST00000409076 H3BMG7 143 aa6.51□□□□□ -1.37
SNX13-201ENST00000409076 ATP6V0E1O15342 81 aa6.51□□□□□ -1.37
SNX13-201ENST00000409076 SCGB1C2P0DMR2 95 aa6.51□□□□□ -1.37
SNX13-201ENST00000409076 C5orf64Q2M2E5 130 aa6.51□□□□□ -1.37
SNX13-201ENST00000409076 ETDBQ3ZM63 59 aa6.51□□□□□ -1.37
SNX13-201ENST00000409076 FAM104BQ5XKR9 115 aa6.51□□□□□ -1.37
SNX13-201ENST00000409076 MRPL35Q9NZE8 188 aaKnown RBP6.51□□□□□ -1.37
SNX13-201ENST00000409076 TNFRSF6BO95407 300 aa6.5□□□□□ -1.37
SNX13-201ENST00000409076 HOXB4P17483 251 aaPredicted RBP6.5□□□□□ -1.37
SNX13-201ENST00000409076 SAMD5Q5TGI4 173 aa6.5□□□□□ -1.37
SNX13-201ENST00000409076 B9A039 149 aa6.5□□□□□ -1.37
SNX13-201ENST00000409076 CLEC2AQ6UVW9 174 aa6.5□□□□□ -1.37
SNX13-201ENST00000409076 C1orf122Q6ZSJ8 110 aa6.5□□□□□ -1.37
SNX13-201ENST00000409076 PRR25Q96S07 402 aa6.5□□□□□ -1.37
SNX13-201ENST00000409076 SRSF8Q9BRL6 282 aaKnown RBP6.5□□□□□ -1.37
SNX13-201ENST00000409076 MLST8Q9BVC4 326 aa6.5□□□□□ -1.37
SNX13-201ENST00000409076 PRO3102Q9H379 93 aa6.5□□□□□ -1.37
SNX13-201ENST00000409076 FLNCQ14315 2725 aa6.5□□□□□ -1.37
SNX13-201ENST00000409076 SMAD7O15105 426 aaKnown RBP6.5□□□□□ -1.37
SNX13-201ENST00000409076 IGLV2-11P01706 119 aa6.5□□□□□ -1.37
SNX13-201ENST00000409076 SMIM13P0DJ93 91 aa6.5□□□□□ -1.37
SNX13-201ENST00000409076 COX8AP10176 69 aa6.5□□□□□ -1.37
SNX13-201ENST00000409076 Q1RN00 199 aa6.5□□□□□ -1.37
SNX13-201ENST00000409076 TMEM95Q3KNT9 176 aa6.5□□□□□ -1.37
SNX13-201ENST00000409076 DLX6P56179 175 aa6.49□□□□□ -1.37
SNX13-201ENST00000409076 KLF5Q13887 457 aaPredicted RBP6.49□□□□□ -1.37
SNX13-201ENST00000409076 DEFB125Q8N687 156 aa6.49□□□□□ -1.37
SNX13-201ENST00000409076 RPL39LQ96EH5 51 aaKnown RBP6.49□□□□□ -1.37
SNX13-201ENST00000409076 C7orf69Q9H7B7 122 aa6.49□□□□□ -1.37
SNX13-201ENST00000409076 PHLDA3Q9Y5J5 127 aa6.49□□□□□ -1.37
SNX13-201ENST00000409076 H3BRN7 92 aa6.49□□□□□ -1.37
SNX13-201ENST00000409076 CR1LQ2VPA4 569 aa6.49□□□□□ -1.37
SNX13-201ENST00000409076 RNASE13Q5GAN3 156 aaKnown RBP6.49□□□□□ -1.37
SNX13-201ENST00000409076 C11orf44Q8N8P7 122 aa6.49□□□□□ -1.37
SNX13-201ENST00000409076 HRNRQ86YZ3 2850 aaPredicted RBP6.49□□□□□ -1.37
SNX13-201ENST00000409076 ZFHX3Q15911 3703 aa6.49□□□□□ -1.37
SNX13-201ENST00000409076 FABP5P3A8MUU1 101 aa6.49□□□□□ -1.37
SNX13-201ENST00000409076 SMIM17P0DL12 118 aa6.49□□□□□ -1.37
SNX13-201ENST00000409076 TMEM170BQ5T4T1 132 aa6.49□□□□□ -1.37
SNX13-201ENST00000409076 CHAC1Q9BUX1 264 aa6.49□□□□□ -1.37
SNX13-201ENST00000409076 JPT2Q9H910 190 aa6.49□□□□□ -1.37
SNX13-201ENST00000409076 CHODLQ9H9P2 273 aa6.49□□□□□ -1.37
SNX13-201ENST00000409076 TEX48A0A1B0GUV7 120 aa6.48□□□□□ -1.37
SNX13-201ENST00000409076 HAX1O00165 279 aa6.48□□□□□ -1.37
SNX13-201ENST00000409076 Q8NA96 180 aa6.48□□□□□ -1.37
SNX13-201ENST00000409076 SCGB3A1Q96QR1 104 aa6.48□□□□□ -1.37
SNX13-201ENST00000409076 TRAV12-2A0A075B6T6 113 aa6.48□□□□□ -1.37
SNX13-201ENST00000409076 A0A1B0GWB2 263 aa6.48□□□□□ -1.37
SNX13-201ENST00000409076 TMEM238C9JI98 176 aa6.48□□□□□ -1.37
SNX13-201ENST00000409076 CD5LO43866 347 aa6.48□□□□□ -1.37
SNX13-201ENST00000409076 TRBV12-3P01733 135 aa6.48□□□□□ -1.37
SNX13-201ENST00000409076 IGKCP01834 107 aa6.48□□□□□ -1.37
SNX13-201ENST00000409076 ZFP36P26651 326 aaKnown RBP6.48□□□□□ -1.37
SNX13-201ENST00000409076 BMI1P35226 326 aa6.48□□□□□ -1.37
SNX13-201ENST00000409076 C2orf91Q6ZV80 131 aa6.48□□□□□ -1.37
SNX13-201ENST00000409076 DTX2Q86UW9 622 aa6.48□□□□□ -1.37
SNX13-201ENST00000409076 KLHL30-AS1Q8NEE0 82 aa6.48□□□□□ -1.37
SNX13-201ENST00000409076 BPESC1Q9GZL8 116 aa6.48□□□□□ -1.37
SNX13-201ENST00000409076 IGHV3OR16-12A0A075B7B8 117 aa6.48□□□□□ -1.37
SNX13-201ENST00000409076 SCGB2A1O75556 95 aa6.48□□□□□ -1.37
SNX13-201ENST00000409076 PSMB2P49721 201 aa6.48□□□□□ -1.37
SNX13-201ENST00000409076 ADAMTSL5Q6ZMM2 481 aa6.48□□□□□ -1.37
SNX13-201ENST00000409076 NUP37Q8NFH4 326 aa6.48□□□□□ -1.37
SNX13-201ENST00000409076 NRGNQ92686 78 aa6.48□□□□□ -1.37
SNX13-201ENST00000409076 PRSS22Q9GZN4 317 aa6.48□□□□□ -1.37
SNX13-201ENST00000409076 ADARB2-AS1A8MUL3 147 aa6.47□□□□□ -1.37
SNX13-201ENST00000409076 GNRH2O43555 120 aa6.47□□□□□ -1.37
SNX13-201ENST00000409076 FSTL3O95633 263 aa6.47□□□□□ -1.37
SNX13-201ENST00000409076 IGLV1-47P01700 117 aa6.47□□□□□ -1.37
SNX13-201ENST00000409076 SAA4P35542 130 aa6.47□□□□□ -1.37
SNX13-201ENST00000409076 WFDC2Q14508 124 aa6.47□□□□□ -1.37
SNX13-201ENST00000409076 MRGPRG-AS1Q2M3A8 158 aa6.47□□□□□ -1.37
SNX13-201ENST00000409076 CSTL1Q9H114 145 aa6.47□□□□□ -1.37
SNX13-201ENST00000409076 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP6.47□□□□□ -1.37
SNX13-201ENST00000409076 MYCNOSP40205 109 aa6.47□□□□□ -1.37
SNX13-201ENST00000409076 METTL26Q96S19 204 aa6.47□□□□□ -1.37
SNX13-201ENST00000409076 EDN2P20800 178 aa6.47□□□□□ -1.37
SNX13-201ENST00000409076 FANCD2OSQ96PS1 177 aa6.47□□□□□ -1.37
SNX13-201ENST00000409076 AGPAT4-IT1Q9H0P7 198 aa6.47□□□□□ -1.37
SNX13-201ENST00000409076 MRPL16Q9NX20 251 aaKnown RBP6.47□□□□□ -1.37
SNX13-201ENST00000409076 ZNF492Q9P255 531 aa6.47□□□□□ -1.37
SNX13-201ENST00000409076 NPIPB6E9PJ23 425 aa6.46□□□□□ -1.37
SNX13-201ENST00000409076 LINC01545Q5VT33 79 aa6.46□□□□□ -1.37
SNX13-201ENST00000409076 PVRIGQ6DKI7 326 aa6.46□□□□□ -1.37
SNX13-201ENST00000409076 RASL11AQ6T310 242 aa6.46□□□□□ -1.37
SNX13-201ENST00000409076 ZNF479Q96JC4 524 aa6.46□□□□□ -1.37
SNX13-201ENST00000409076 TSSC4Q9Y5U2 329 aaPredicted RBP6.46□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 154.1 ms