RNA–Protein interactions for RNA: ENST00000406938.2

CHKB-201, Transcript of choline kinase beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHKB, Length 1,638 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-201ENST00000406938 SPINK13Q1W4C9 94 aa15.07■□□□□ 0
CHKB-201ENST00000406938 SMUG1Q53HV7 270 aa15.07■□□□□ 0
CHKB-201ENST00000406938 SVBPQ8N300 66 aa15.07■□□□□ 0
CHKB-201ENST00000406938 ISOC2Q96AB3 205 aa15.07■□□□□ 0
CHKB-201ENST00000406938 SRD5A3Q9H8P0 318 aa15.07■□□□□ 0
CHKB-201ENST00000406938 GCGP01275 180 aa15.06■□□□□ 0
CHKB-201ENST00000406938 KLLNB2CW77 178 aa15.06■□□□□ 0
CHKB-201ENST00000406938 TSPOP30536 169 aa15.06■□□□□ 0
CHKB-201ENST00000406938 CDKN1BP46527 198 aa15.06■□□□□ 0
CHKB-201ENST00000406938 ZNF80P51504 273 aaPredicted RBP15.06■□□□□ 0
CHKB-201ENST00000406938 FXYD7P58549 80 aa15.06■□□□□ 0
CHKB-201ENST00000406938 LINC00322Q6ZN03 302 aaPredicted RBP15.06■□□□□ 0
CHKB-201ENST00000406938 GPX1P07203 203 aa15.05■□□□□ -0
CHKB-201ENST00000406938 RPL35AP18077 110 aaKnown RBP15.05■□□□□ -0
CHKB-201ENST00000406938 BTN1A1Q13410 526 aa15.05■□□□□ -0
CHKB-201ENST00000406938 CLRN3Q8NCR9 226 aa15.05■□□□□ -0
CHKB-201ENST00000406938 TRAV12-2A0A075B6T6 113 aa15.04■□□□□ -0
CHKB-201ENST00000406938 CRIP1P50238 77 aa15.04■□□□□ -0
CHKB-201ENST00000406938 BIN3Q9NQY0 253 aa15.04■□□□□ -0
CHKB-201ENST00000406938 MGAM2Q2M2H8 2515 aa15.04■□□□□ -0
CHKB-201ENST00000406938 RNASE4P34096 147 aaKnown RBP15.03■□□□□ -0
CHKB-201ENST00000406938 FAM162BQ5T6X4 162 aa15.03■□□□□ -0
CHKB-201ENST00000406938 RNASE7Q9H1E1 156 aaKnown RBP15.03■□□□□ -0
CHKB-201ENST00000406938 SCO1O75880 301 aa15.03■□□□□ -0
CHKB-201ENST00000406938 SNAPINO95295 136 aa15.03■□□□□ -0
CHKB-201ENST00000406938 PFN1P07737 140 aaKnown RBP15.03■□□□□ -0
CHKB-201ENST00000406938 NUTF2P61970 127 aaKnown RBP15.03■□□□□ -0
CHKB-201ENST00000406938 GFI1BQ5VTD9 330 aa15.03■□□□□ -0
CHKB-201ENST00000406938 SFRP2Q96HF1 295 aa15.03■□□□□ -0
CHKB-201ENST00000406938 SH2D1AO60880 128 aa15.02□□□□□ -0.01
CHKB-201ENST00000406938 ERVFC1-1P60608 527 aa15.02□□□□□ -0.01
CHKB-201ENST00000406938 IBA57Q5T440 356 aaKnown RBP15.02□□□□□ -0.01
CHKB-201ENST00000406938 KPRPQ5T749 579 aaPredicted RBP15.02□□□□□ -0.01
CHKB-201ENST00000406938 Q6ZQT7 251 aa15.02□□□□□ -0.01
CHKB-201ENST00000406938 C7orf71A4D174 169 aa15.01□□□□□ -0.01
CHKB-201ENST00000406938 C19orf71A6NCJ1 209 aa15.01□□□□□ -0.01
CHKB-201ENST00000406938 CRXO43186 299 aaPredicted RBP15.01□□□□□ -0.01
CHKB-201ENST00000406938 IGHV4-30-4P0DP06 118 aa15.01□□□□□ -0.01
CHKB-201ENST00000406938 Q6AWC8 147 aa15.01□□□□□ -0.01
CHKB-201ENST00000406938 B4DEV8 164 aa15□□□□□ -0.01
CHKB-201ENST00000406938 RHEBQ15382 184 aa15□□□□□ -0.01
CHKB-201ENST00000406938 FAM231DQ6ZW35 169 aa15□□□□□ -0.01
CHKB-201ENST00000406938 DAZAP1Q96EP5 407 aaKnown RBP15□□□□□ -0.01
CHKB-201ENST00000406938 TUBA4BQ9H853 241 aa15□□□□□ -0.01
CHKB-201ENST00000406938 DNAH3Q8TD57 4116 aa14.99□□□□□ -0.01
CHKB-201ENST00000406938 TRAV12-3A0A0B4J271 114 aa14.99□□□□□ -0.01
CHKB-201ENST00000406938 FABP5P3A8MUU1 101 aa14.99□□□□□ -0.01
CHKB-201ENST00000406938 RNF212Q495C1 297 aa14.99□□□□□ -0.01
CHKB-201ENST00000406938 ATRAIDQ6UW56 229 aa14.99□□□□□ -0.01
CHKB-201ENST00000406938 NUDT10Q8NFP7 164 aa14.99□□□□□ -0.01
CHKB-201ENST00000406938 NUDT11Q96G61 164 aa14.99□□□□□ -0.01
CHKB-201ENST00000406938 XCL2Q9UBD3 114 aa14.99□□□□□ -0.01
CHKB-201ENST00000406938 TRAV21A0A0B4J279 112 aa14.99□□□□□ -0.01
CHKB-201ENST00000406938 C7orf77A4D0Y5 90 aa14.99□□□□□ -0.01
CHKB-201ENST00000406938 P01737 135 aa14.99□□□□□ -0.01
CHKB-201ENST00000406938 AMBPP02760 352 aa14.99□□□□□ -0.01
CHKB-201ENST00000406938 MORN3Q6PF18 240 aaPredicted RBP14.99□□□□□ -0.01
CHKB-201ENST00000406938 OSTCQ9NRP0 149 aa14.99□□□□□ -0.01
CHKB-201ENST00000406938 NOTCH1P46531 2555 aa14.98□□□□□ -0.01
CHKB-201ENST00000406938 LOC102724200A0A096LPH7 203 aaPredicted RBP14.98□□□□□ -0.01
CHKB-201ENST00000406938 MT-ND4LP03901 98 aa14.98□□□□□ -0.01
CHKB-201ENST00000406938 GIG44P09565 113 aaPredicted RBP14.98□□□□□ -0.01
CHKB-201ENST00000406938 C15orf54Q8N8G6 183 aa14.98□□□□□ -0.01
CHKB-201ENST00000406938 OR10G8Q8NGN5 311 aa14.98□□□□□ -0.01
CHKB-201ENST00000406938 RPS10P5Q9NQ39 176 aa14.98□□□□□ -0.01
CHKB-201ENST00000406938 ZNF324O75467 553 aaPredicted RBP14.97□□□□□ -0.01
CHKB-201ENST00000406938 INSP01308 110 aa14.97□□□□□ -0.01
CHKB-201ENST00000406938 PRB2P02812 416 aaPredicted RBP14.97□□□□□ -0.01
CHKB-201ENST00000406938 RBMY1A1P0DJD3 496 aaKnown RBP14.97□□□□□ -0.01
CHKB-201ENST00000406938 RBMY1CP0DJD4 496 aa14.97□□□□□ -0.01
CHKB-201ENST00000406938 RBMY1FQ15415 496 aaKnown RBP14.97□□□□□ -0.01
CHKB-201ENST00000406938 C11orf21Q9P2W6 132 aa14.97□□□□□ -0.01
CHKB-201ENST00000406938 NBEAL1Q6ZS30 2694 aa14.97□□□□□ -0.01
CHKB-201ENST00000406938 ZNF705GA8MUZ8 300 aaPredicted RBP14.96□□□□□ -0.01
CHKB-201ENST00000406938 CA1P00915 261 aaPredicted RBP14.96□□□□□ -0.01
CHKB-201ENST00000406938 RPL19P84098 196 aaKnown RBP14.96□□□□□ -0.01
CHKB-201ENST00000406938 RPP21Q9H633 154 aaKnown RBP14.96□□□□□ -0.01
CHKB-201ENST00000406938 V9GYV3 84 aa14.96□□□□□ -0.01
CHKB-201ENST00000406938 GATCO43716 136 aaKnown RBP14.95□□□□□ -0.02
CHKB-201ENST00000406938 ANAPC16Q96DE5 110 aa14.95□□□□□ -0.02
CHKB-201ENST00000406938 CSTL1Q9H114 145 aa14.95□□□□□ -0.02
CHKB-201ENST00000406938 NAGKQ9UJ70 344 aa14.95□□□□□ -0.02
CHKB-201ENST00000406938 PPP1R2P9O14990 202 aa14.95□□□□□ -0.02
CHKB-201ENST00000406938 ORM1P02763 201 aa14.95□□□□□ -0.02
CHKB-201ENST00000406938 LINC01559Q495D7 138 aa14.95□□□□□ -0.02
CHKB-201ENST00000406938 OR2D3Q8NGH3 330 aa14.95□□□□□ -0.02
CHKB-201ENST00000406938 C1QTNF4Q9BXJ3 329 aa14.95□□□□□ -0.02
CHKB-201ENST00000406938 A0A087WWC5 75 aa14.94□□□□□ -0.02
CHKB-201ENST00000406938 A8MZ25 164 aa14.94□□□□□ -0.02
CHKB-201ENST00000406938 H7BYZ3 331 aa14.94□□□□□ -0.02
CHKB-201ENST00000406938 MUC21Q5SSG8 566 aa14.94□□□□□ -0.02
CHKB-201ENST00000406938 TMSB15BA0A087X1C1 80 aa14.93□□□□□ -0.02
CHKB-201ENST00000406938 IGKV3D-20A0A0C4DH25 116 aa14.93□□□□□ -0.02
CHKB-201ENST00000406938 KIR2DL5BA0A0G2JN68 375 aa14.93□□□□□ -0.02
CHKB-201ENST00000406938 KIR2DL5BA0A0G2JPC4 375 aa14.93□□□□□ -0.02
CHKB-201ENST00000406938 TMEM189A5PLL7 270 aa14.93□□□□□ -0.02
CHKB-201ENST00000406938 APOC4P55056 127 aa14.93□□□□□ -0.02
CHKB-201ENST00000406938 KIR2DL5AQ8N109 375 aa14.93□□□□□ -0.02
CHKB-201ENST00000406938 KIR2DL5BQ8NHK3 375 aa14.93□□□□□ -0.02
CHKB-201ENST00000406938 CTDSP1Q9GZU7 261 aa14.93□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms