RNA–Protein interactions for RNA: ENST00000405807.8

COL4A3BP-204, Transcript of collagen type IV alpha 3 binding protein, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL4A3BP, Length 2,843 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BP-204ENST00000405807 HRCT1Q6UXD1 115 aa12.68□□□□□ -0.38
COL4A3BP-204ENST00000405807 ZNF493Q6ZR52 646 aa12.68□□□□□ -0.38
COL4A3BP-204ENST00000405807 NUP37Q8NFH4 326 aa12.68□□□□□ -0.38
COL4A3BP-204ENST00000405807 PRO3102Q9H379 93 aa12.68□□□□□ -0.38
COL4A3BP-204ENST00000405807 RAXQ9Y2V3 346 aa12.68□□□□□ -0.38
COL4A3BP-204ENST00000405807 ATMQ13315 3056 aa12.68□□□□□ -0.38
COL4A3BP-204ENST00000405807 DUSP14O95147 198 aaKnown RBP12.68□□□□□ -0.38
COL4A3BP-204ENST00000405807 Q71RC1 249 aaPredicted RBP12.68□□□□□ -0.38
COL4A3BP-204ENST00000405807 SCNM1Q9BWG6 230 aa12.68□□□□□ -0.38
COL4A3BP-204ENST00000405807 TRBV19A0A075B6N1 114 aa12.67□□□□□ -0.38
COL4A3BP-204ENST00000405807 C17orf100A8MU93 164 aa12.67□□□□□ -0.38
COL4A3BP-204ENST00000405807 IGKV2D-26A0A0A0MRZ7 120 aa12.67□□□□□ -0.38
COL4A3BP-204ENST00000405807 PLA2G2CQ5R387 149 aa12.67□□□□□ -0.38
COL4A3BP-204ENST00000405807 TMEM219Q86XT9 240 aa12.67□□□□□ -0.38
COL4A3BP-204ENST00000405807 LYPD1Q8N2G4 141 aa12.67□□□□□ -0.38
COL4A3BP-204ENST00000405807 ANKRD29Q8N6D5 301 aa12.67□□□□□ -0.38
COL4A3BP-204ENST00000405807 GPR179Q6PRD1 2367 aa12.67□□□□□ -0.38
COL4A3BP-204ENST00000405807 A0A096LNJ9 63 aa12.66□□□□□ -0.38
COL4A3BP-204ENST00000405807 CRYGBP07316 175 aa12.66□□□□□ -0.38
COL4A3BP-204ENST00000405807 LOC389332A0A1B0GUA5 103 aa12.66□□□□□ -0.38
COL4A3BP-204ENST00000405807 A8MWV9 139 aa12.66□□□□□ -0.38
COL4A3BP-204ENST00000405807 TMEM178BH3BS89 294 aa12.66□□□□□ -0.38
COL4A3BP-204ENST00000405807 FAM27E3Q08E93 113 aa12.66□□□□□ -0.38
COL4A3BP-204ENST00000405807 ZC2HC1BQ5TFG8 222 aa12.66□□□□□ -0.38
COL4A3BP-204ENST00000405807 C22orf34Q6ZV56 151 aa12.66□□□□□ -0.38
COL4A3BP-204ENST00000405807 TMEM160Q9NX00 188 aa12.66□□□□□ -0.38
COL4A3BP-204ENST00000405807 FAM215AQ9Y5M1 114 aa12.66□□□□□ -0.38
COL4A3BP-204ENST00000405807 D6R8Y8 96 aa12.66□□□□□ -0.38
COL4A3BP-204ENST00000405807 ZNRF2Q8NHG8 242 aa12.66□□□□□ -0.38
COL4A3BP-204ENST00000405807 LINC00477Q96M19 166 aa12.66□□□□□ -0.38
COL4A3BP-204ENST00000405807 U3KQK5 164 aa12.66□□□□□ -0.38
COL4A3BP-204ENST00000405807 PLXNB1O43157 2135 aa12.65□□□□□ -0.38
COL4A3BP-204ENST00000405807 H3BVH4 76 aa12.65□□□□□ -0.38
COL4A3BP-204ENST00000405807 LOXL1Q08397 574 aaPredicted RBP12.65□□□□□ -0.38
COL4A3BP-204ENST00000405807 LYPD2Q6UXB3 125 aa12.65□□□□□ -0.38
COL4A3BP-204ENST00000405807 C15orf53Q8NAA6 179 aa12.65□□□□□ -0.38
COL4A3BP-204ENST00000405807 SHANK2-AS3Q9BTD1 123 aa12.65□□□□□ -0.38
COL4A3BP-204ENST00000405807 SPENQ96T58 3664 aaKnown RBP12.65□□□□□ -0.38
COL4A3BP-204ENST00000405807 PLCE1Q9P212 2302 aa12.65□□□□□ -0.38
COL4A3BP-204ENST00000405807 IGHV1-8P0DP01 117 aa12.65□□□□□ -0.38
COL4A3BP-204ENST00000405807 CNTFRP26992 372 aa12.65□□□□□ -0.38
COL4A3BP-204ENST00000405807 CRIP1P50238 77 aa12.65□□□□□ -0.38
COL4A3BP-204ENST00000405807 DLX6P56179 175 aa12.65□□□□□ -0.38
COL4A3BP-204ENST00000405807 ZNF414Q96IQ9 312 aa12.65□□□□□ -0.38
COL4A3BP-204ENST00000405807 SMG1Q96Q15 3661 aaKnown RBP12.65□□□□□ -0.39
COL4A3BP-204ENST00000405807 FCER1GP30273 86 aa12.64□□□□□ -0.39
COL4A3BP-204ENST00000405807 FAM104BQ5XKR9 115 aa12.64□□□□□ -0.39
COL4A3BP-204ENST00000405807 MORN3Q6PF18 240 aaPredicted RBP12.64□□□□□ -0.39
COL4A3BP-204ENST00000405807 SFTA2Q6UW10 78 aa12.64□□□□□ -0.39
COL4A3BP-204ENST00000405807 ORMDL3Q8N138 153 aa12.64□□□□□ -0.39
COL4A3BP-204ENST00000405807 CCL17Q92583 94 aa12.64□□□□□ -0.39
COL4A3BP-204ENST00000405807 SVILO95425 2214 aa12.64□□□□□ -0.39
COL4A3BP-204ENST00000405807 LOC107984156A0A0G2JMH3 177 aa12.64□□□□□ -0.39
COL4A3BP-204ENST00000405807 TEX22C9J3V5 150 aa12.64□□□□□ -0.39
COL4A3BP-204ENST00000405807 ARL17AQ8IVW1 177 aa12.64□□□□□ -0.39
COL4A3BP-204ENST00000405807 C17orf77Q96MU5 243 aa12.64□□□□□ -0.39
COL4A3BP-204ENST00000405807 I3L2K1 104 aa12.63□□□□□ -0.39
COL4A3BP-204ENST00000405807 K7EM74 188 aa12.63□□□□□ -0.39
COL4A3BP-204ENST00000405807 NDUFS7O75251 213 aa12.63□□□□□ -0.39
COL4A3BP-204ENST00000405807 HBDP02042 147 aa12.63□□□□□ -0.39
COL4A3BP-204ENST00000405807 IL4P05112 153 aa12.63□□□□□ -0.39
COL4A3BP-204ENST00000405807 LOXP28300 417 aaPredicted RBP12.63□□□□□ -0.39
COL4A3BP-204ENST00000405807 TMEM155Q4W5P6 130 aa12.63□□□□□ -0.39
COL4A3BP-204ENST00000405807 AGRNO00468 2067 aa12.63□□□□□ -0.39
COL4A3BP-204ENST00000405807 SRSF9Q13242 221 aaKnown RBP eCLIP12.63□□□□□ -0.39
COL4A3BP-204ENST00000405807 LYZL1Q6UWQ5 148 aa12.63□□□□□ -0.39
COL4A3BP-204ENST00000405807 ZFP2Q6ZN57 461 aa12.63□□□□□ -0.39
COL4A3BP-204ENST00000405807 TRPT1Q86TN4 253 aaKnown RBP12.63□□□□□ -0.39
COL4A3BP-204ENST00000405807 C1orf43Q9BWL3 253 aa12.63□□□□□ -0.39
COL4A3BP-204ENST00000405807 IGKV1-17P01599 117 aa12.62□□□□□ -0.39
COL4A3BP-204ENST00000405807 H3BRN7 92 aa12.62□□□□□ -0.39
COL4A3BP-204ENST00000405807 IFI27L1Q96BM0 104 aa12.62□□□□□ -0.39
COL4A3BP-204ENST00000405807 DEFB109BQ30KR1 87 aa12.61□□□□□ -0.39
COL4A3BP-204ENST00000405807 AMN1Q8IY45 258 aa12.61□□□□□ -0.39
COL4A3BP-204ENST00000405807 TIMD4Q96H15 378 aa12.61□□□□□ -0.39
COL4A3BP-204ENST00000405807 CTSZQ9UBR2 303 aa12.61□□□□□ -0.39
COL4A3BP-204ENST00000405807 NCOR1O75376 2440 aa12.61□□□□□ -0.39
COL4A3BP-204ENST00000405807 TINCRA0A1B0GVN0 87 aa12.61□□□□□ -0.39
COL4A3BP-204ENST00000405807 RS1O15537 224 aa12.61□□□□□ -0.39
COL4A3BP-204ENST00000405807 TMEM158Q8WZ71 300 aa12.61□□□□□ -0.39
COL4A3BP-204ENST00000405807 HIST1H4GQ99525 98 aa12.61□□□□□ -0.39
COL4A3BP-204ENST00000405807 DKK2Q9UBU2 259 aa12.61□□□□□ -0.39
COL4A3BP-204ENST00000405807 ODF3Q96PU9 254 aa12.61□□□□□ -0.39
COL4A3BP-204ENST00000405807 FAM236AA0A1B0GUQ0 79 aa12.6□□□□□ -0.39
COL4A3BP-204ENST00000405807 FAM236BA0A1B0GV22 79 aa12.6□□□□□ -0.39
COL4A3BP-204ENST00000405807 C3orf22Q8N5N4 141 aa12.6□□□□□ -0.39
COL4A3BP-204ENST00000405807 RNF125Q96EQ8 232 aa12.6□□□□□ -0.39
COL4A3BP-204ENST00000405807 C8orf49Q96NF6 230 aa12.6□□□□□ -0.39
COL4A3BP-204ENST00000405807 HOXA3O43365 443 aaPredicted RBP12.6□□□□□ -0.39
COL4A3BP-204ENST00000405807 FOXC1Q12948 553 aa12.6□□□□□ -0.39
COL4A3BP-204ENST00000405807 MRPL51Q4U2R6 128 aaKnown RBP12.6□□□□□ -0.39
COL4A3BP-204ENST00000405807 KAAG1Q9UBP8 84 aa12.6□□□□□ -0.39
COL4A3BP-204ENST00000405807 IGHV1-3A0A0C4DH29 117 aa12.59□□□□□ -0.39
COL4A3BP-204ENST00000405807 M0R2P5 195 aa12.59□□□□□ -0.39
COL4A3BP-204ENST00000405807 SCGB1C2P0DMR2 95 aa12.59□□□□□ -0.39
COL4A3BP-204ENST00000405807 PAX8Q06710 450 aa12.59□□□□□ -0.39
COL4A3BP-204ENST00000405807 TAL2Q16559 108 aa12.59□□□□□ -0.39
COL4A3BP-204ENST00000405807 AAMDCQ9H7C9 122 aa12.59□□□□□ -0.39
COL4A3BP-204ENST00000405807 PSMG4Q5JS54 123 aa12.59□□□□□ -0.39
COL4A3BP-204ENST00000405807 SBSPONQ8IVN8 264 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 61.9 ms