RNA–Protein interactions for RNA: ENST00000403997.2

SDF4-203, Transcript of stromal cell derived factor 4, humanhuman

TSL 3

Gene SDF4, Length 728 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-203ENST00000403997 HSD17B11Q8NBQ5 300 aa9.28□□□□□ -0.92
SDF4-203ENST00000403997 ZNRF2Q8NHG8 242 aa9.28□□□□□ -0.92
SDF4-203ENST00000403997 ARPC5LQ9BPX5 153 aa9.28□□□□□ -0.92
SDF4-203ENST00000403997 RPH3ALQ9UNE2 315 aa9.28□□□□□ -0.92
SDF4-203ENST00000403997 LINC00588Q9Y4M8 146 aa9.28□□□□□ -0.92
SDF4-203ENST00000403997 HERC2O95714 4834 aa9.27□□□□□ -0.93
SDF4-203ENST00000403997 Q5BKY6 102 aa9.27□□□□□ -0.93
SDF4-203ENST00000403997 MUC21Q5SSG8 566 aa9.27□□□□□ -0.93
SDF4-203ENST00000403997 IBA57Q5T440 356 aaKnown RBP9.27□□□□□ -0.93
SDF4-203ENST00000403997 SSX7Q7RTT5 188 aa9.27□□□□□ -0.93
SDF4-203ENST00000403997 AQP10Q96PS8 301 aa9.27□□□□□ -0.93
SDF4-203ENST00000403997 A0A1B0GVY2 172 aa9.26□□□□□ -0.93
SDF4-203ENST00000403997 H3BNG1 76 aa9.26□□□□□ -0.93
SDF4-203ENST00000403997 SPINK4O60575 86 aa9.26□□□□□ -0.93
SDF4-203ENST00000403997 CDC34P49427 236 aaPredicted RBP9.26□□□□□ -0.93
SDF4-203ENST00000403997 GOLT1AQ6ZVE7 132 aa9.26□□□□□ -0.93
SDF4-203ENST00000403997 C18orf15Q96N68 181 aa9.26□□□□□ -0.93
SDF4-203ENST00000403997 LENEPQ9Y5L5 61 aa9.26□□□□□ -0.93
SDF4-203ENST00000403997 NBDYA0A0U1RRE5 68 aa9.25□□□□□ -0.93
SDF4-203ENST00000403997 GIPP09681 153 aaPredicted RBP9.25□□□□□ -0.93
SDF4-203ENST00000403997 ARL14EPLP0DKL9 152 aa9.25□□□□□ -0.93
SDF4-203ENST00000403997 ATP6V0CP27449 155 aa9.25□□□□□ -0.93
SDF4-203ENST00000403997 ZNF415Q09FC8 603 aa9.25□□□□□ -0.93
SDF4-203ENST00000403997 INO80EQ8NBZ0 244 aaPredicted RBP9.25□□□□□ -0.93
SDF4-203ENST00000403997 MRPL16Q9NX20 251 aaKnown RBP9.25□□□□□ -0.93
SDF4-203ENST00000403997 HECTD4Q9Y4D8 3996 aa9.24□□□□□ -0.93
SDF4-203ENST00000403997 IGHV3-53P01767 116 aa9.24□□□□□ -0.93
SDF4-203ENST00000403997 MBP02144 154 aa9.24□□□□□ -0.93
SDF4-203ENST00000403997 ESRGQ1W209 222 aa9.24□□□□□ -0.93
SDF4-203ENST00000403997 Q6AWC8 147 aa9.24□□□□□ -0.93
SDF4-203ENST00000403997 FAM159AQ6UWV7 190 aa9.24□□□□□ -0.93
SDF4-203ENST00000403997 OR2G3Q8NGZ4 309 aa9.24□□□□□ -0.93
SDF4-203ENST00000403997 TMED6Q8WW62 240 aa9.24□□□□□ -0.93
SDF4-203ENST00000403997 ASB13Q8WXK3 278 aa9.24□□□□□ -0.93
SDF4-203ENST00000403997 RAB24Q969Q5 203 aa9.24□□□□□ -0.93
SDF4-203ENST00000403997 VSIG2Q96IQ7 327 aa9.24□□□□□ -0.93
SDF4-203ENST00000403997 PSMG3Q9BT73 122 aaPredicted RBP9.24□□□□□ -0.93
SDF4-203ENST00000403997 Q9H8V8 135 aa9.24□□□□□ -0.93
SDF4-203ENST00000403997 MUC4Q99102 2169 aa9.23□□□□□ -0.93
SDF4-203ENST00000403997 FXYD6-FXYD2A0A087WZ82 144 aa9.23□□□□□ -0.93
SDF4-203ENST00000403997 STAG3L2P0CL84 134 aa9.23□□□□□ -0.93
SDF4-203ENST00000403997 STAG3L3P0CL85 134 aa9.23□□□□□ -0.93
SDF4-203ENST00000403997 GNG5P63218 68 aa9.23□□□□□ -0.93
SDF4-203ENST00000403997 SERF2P84101 59 aa9.23□□□□□ -0.93
SDF4-203ENST00000403997 TMEM183BQ1AE95 376 aa9.23□□□□□ -0.93
SDF4-203ENST00000403997 TMEM183AQ8IXX5 376 aa9.23□□□□□ -0.93
SDF4-203ENST00000403997 ARL6IP6Q8N6S5 226 aa9.23□□□□□ -0.93
SDF4-203ENST00000403997 ST6GAL2Q96JF0 529 aa9.23□□□□□ -0.93
SDF4-203ENST00000403997 SH3BGRL3Q9H299 93 aa9.23□□□□□ -0.93
SDF4-203ENST00000403997 TREM1Q9NP99 234 aa9.23□□□□□ -0.93
SDF4-203ENST00000403997 MDFICQ9P1T7 246 aa9.23□□□□□ -0.93
SDF4-203ENST00000403997 NAGKQ9UJ70 344 aa9.23□□□□□ -0.93
SDF4-203ENST00000403997 TRGV11A0A075B6L2 103 aa9.22□□□□□ -0.93
SDF4-203ENST00000403997 A0A096LPF7 62 aa9.22□□□□□ -0.93
SDF4-203ENST00000403997 TRAV8-1A0A0A6YYK1 113 aa9.22□□□□□ -0.93
SDF4-203ENST00000403997 BORCS7-ASMTA0A0B4J1R7 106 aa9.22□□□□□ -0.93
SDF4-203ENST00000403997 PAX4O43316 350 aa9.22□□□□□ -0.93
SDF4-203ENST00000403997 GCHFRP30047 84 aa9.22□□□□□ -0.93
SDF4-203ENST00000403997 C6orf223Q8N319 242 aa9.22□□□□□ -0.93
SDF4-203ENST00000403997 ACTR3CQ9C0K3 210 aaPredicted RBP9.22□□□□□ -0.93
SDF4-203ENST00000403997 FAT2Q9NYQ8 4349 aa9.21□□□□□ -0.93
SDF4-203ENST00000403997 TRAV21A0A0B4J279 112 aa9.21□□□□□ -0.94
SDF4-203ENST00000403997 F6UZH7 168 aa9.21□□□□□ -0.94
SDF4-203ENST00000403997 RGS21Q2M5E4 152 aa9.21□□□□□ -0.94
SDF4-203ENST00000403997 RPL7L1Q6DKI1 246 aaKnown RBP9.21□□□□□ -0.94
SDF4-203ENST00000403997 OR2T35Q8NGX2 323 aa9.21□□□□□ -0.94
SDF4-203ENST00000403997 TVP23CQ96ET8 276 aa9.21□□□□□ -0.94
SDF4-203ENST00000403997 SGK494Q96LW2 274 aa9.21□□□□□ -0.94
SDF4-203ENST00000403997 SPXQ9BT56 116 aa9.21□□□□□ -0.94
SDF4-203ENST00000403997 PRO0255Q9UI72 69 aa9.21□□□□□ -0.94
SDF4-203ENST00000403997 TNFSF18Q9UNG2 199 aa9.21□□□□□ -0.94
SDF4-203ENST00000403997 DNAH2Q9P225 4427 aa9.21□□□□□ -0.94
SDF4-203ENST00000403997 RNF222A6NCQ9 220 aa9.2□□□□□ -0.94
SDF4-203ENST00000403997 GNRH2O43555 120 aa9.2□□□□□ -0.94
SDF4-203ENST00000403997 CXorf1O96002 111 aa9.2□□□□□ -0.94
SDF4-203ENST00000403997 SUMO1P63165 101 aaKnown RBP9.2□□□□□ -0.94
SDF4-203ENST00000403997 SLAQ13239 276 aa9.2□□□□□ -0.94
SDF4-203ENST00000403997 FHL2Q14192 279 aa9.2□□□□□ -0.94
SDF4-203ENST00000403997 IQCF2Q8IXL9 164 aa9.2□□□□□ -0.94
SDF4-203ENST00000403997 C5orf17Q8NAS9 161 aa9.2□□□□□ -0.94
SDF4-203ENST00000403997 SUN5Q8TC36 379 aa9.2□□□□□ -0.94
SDF4-203ENST00000403997 C8orf49Q96NF6 230 aa9.2□□□□□ -0.94
SDF4-203ENST00000403997 NDFIP1Q9BT67 221 aa9.2□□□□□ -0.94
SDF4-203ENST00000403997 UPK3BQ9BT76 320 aa9.2□□□□□ -0.94
SDF4-203ENST00000403997 TMEM167BQ9NRX6 74 aa9.2□□□□□ -0.94
SDF4-203ENST00000403997 HHLA3Q9XRX5 114 aa9.2□□□□□ -0.94
SDF4-203ENST00000403997 MRPS16Q9Y3D3 137 aaKnown RBP9.2□□□□□ -0.94
SDF4-203ENST00000403997 ICOSQ9Y6W8 199 aa9.2□□□□□ -0.94
SDF4-203ENST00000403997 TRGV4A0A0C4DH28 118 aa9.19□□□□□ -0.94
SDF4-203ENST00000403997 SERTM2A0A1B0GWG4 89 aa9.19□□□□□ -0.94
SDF4-203ENST00000403997 K7EQM0 130 aa9.19□□□□□ -0.94
SDF4-203ENST00000403997 CRYBA4P53673 196 aa9.19□□□□□ -0.94
SDF4-203ENST00000403997 TNP2Q05952 138 aa9.19□□□□□ -0.94
SDF4-203ENST00000403997 TDRG1Q3Y452 100 aa9.19□□□□□ -0.94
SDF4-203ENST00000403997 TTC32Q5I0X7 151 aa9.19□□□□□ -0.94
SDF4-203ENST00000403997 RASL10AQ92737 203 aa9.19□□□□□ -0.94
SDF4-203ENST00000403997 DNAH17Q9UFH2 4485 aa9.19□□□□□ -0.94
SDF4-203ENST00000403997 IGHV3-16A0A0C4DH30 117 aa9.18□□□□□ -0.94
SDF4-203ENST00000403997 TCRAP04437 139 aa9.18□□□□□ -0.94
SDF4-203ENST00000403997 SFTA3P0C7M3 94 aa9.18□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 86.3 ms