RNA–Protein interactions for RNA: ENST00000400555.7

PPP4R1-202, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PPP4R1, Length 3,885 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-202ENST00000400555 TNFRSF6BO95407 300 aa9.82□□□□□ -0.84
PPP4R1-202ENST00000400555 MSRB2Q9Y3D2 182 aa9.82□□□□□ -0.84
PPP4R1-202ENST00000400555 F6UB75 175 aa9.82□□□□□ -0.84
PPP4R1-202ENST00000400555 F8W735 103 aaPredicted RBP9.82□□□□□ -0.84
PPP4R1-202ENST00000400555 HTN1P15515 57 aa9.82□□□□□ -0.84
PPP4R1-202ENST00000400555 NBL1P41271 181 aa9.82□□□□□ -0.84
PPP4R1-202ENST00000400555 NPBQ8NG41 125 aa9.82□□□□□ -0.84
PPP4R1-202ENST00000400555 IGF1P05019 195 aa9.82□□□□□ -0.84
PPP4R1-202ENST00000400555 PDE6HQ13956 83 aa9.82□□□□□ -0.84
PPP4R1-202ENST00000400555 LINC01545Q5VT33 79 aa9.82□□□□□ -0.84
PPP4R1-202ENST00000400555 TTC9CQ8N5M4 171 aa9.82□□□□□ -0.84
PPP4R1-202ENST00000400555 LY6G5BQ8NDX9 201 aa9.82□□□□□ -0.84
PPP4R1-202ENST00000400555 NOTCH2Q04721 2471 aa9.81□□□□□ -0.84
PPP4R1-202ENST00000400555 ARL3P36405 182 aa9.81□□□□□ -0.84
PPP4R1-202ENST00000400555 RPL24P83731 157 aaKnown RBP9.81□□□□□ -0.84
PPP4R1-202ENST00000400555 SFTA2Q6UW10 78 aa9.81□□□□□ -0.84
PPP4R1-202ENST00000400555 F5H697 171 aa9.81□□□□□ -0.84
PPP4R1-202ENST00000400555 COX8AP10176 69 aa9.81□□□□□ -0.84
PPP4R1-202ENST00000400555 EFNA4P52798 201 aa9.81□□□□□ -0.84
PPP4R1-202ENST00000400555 EEF1AKMT3Q96AZ1 226 aa9.81□□□□□ -0.84
PPP4R1-202ENST00000400555 DTX2Q86UW9 622 aa9.81□□□□□ -0.84
PPP4R1-202ENST00000400555 FLNCQ14315 2725 aa9.81□□□□□ -0.84
PPP4R1-202ENST00000400555 A0A1B0GW15 77 aa9.8□□□□□ -0.84
PPP4R1-202ENST00000400555 MRPS12O15235 138 aaKnown RBP9.8□□□□□ -0.84
PPP4R1-202ENST00000400555 MS4A6AQ9H2W1 248 aa9.8□□□□□ -0.84
PPP4R1-202ENST00000400555 PPP1R14DQ9NXH3 145 aa9.8□□□□□ -0.84
PPP4R1-202ENST00000400555 RNASE4P34096 147 aaKnown RBP9.8□□□□□ -0.84
PPP4R1-202ENST00000400555 RPS20P60866 119 aaKnown RBP9.8□□□□□ -0.84
PPP4R1-202ENST00000400555 MYOZ3Q8TDC0 251 aa9.8□□□□□ -0.84
PPP4R1-202ENST00000400555 SRSF8Q9BRL6 282 aaKnown RBP9.8□□□□□ -0.84
PPP4R1-202ENST00000400555 TRBV12-3P01733 135 aa9.79□□□□□ -0.84
PPP4R1-202ENST00000400555 ZC2HC1BQ5TFG8 222 aa9.79□□□□□ -0.84
PPP4R1-202ENST00000400555 NEGR1Q7Z3B1 354 aa9.79□□□□□ -0.84
PPP4R1-202ENST00000400555 PEF1Q9UBV8 284 aaKnown RBP9.79□□□□□ -0.84
PPP4R1-202ENST00000400555 GAGE12BA1L429 117 aa9.79□□□□□ -0.84
PPP4R1-202ENST00000400555 A6NDN8 102 aa9.79□□□□□ -0.84
PPP4R1-202ENST00000400555 KIR3DS1Q14943 382 aa9.79□□□□□ -0.84
PPP4R1-202ENST00000400555 C8orf86Q6ZUL3 223 aa9.79□□□□□ -0.84
PPP4R1-202ENST00000400555 PIP4P2Q8N4L2 257 aa9.79□□□□□ -0.84
PPP4R1-202ENST00000400555 K7ERJ3 54 aa9.79□□□□□ -0.84
PPP4R1-202ENST00000400555 BUB3O43684 328 aa9.79□□□□□ -0.84
PPP4R1-202ENST00000400555 EMP1P54849 157 aa9.79□□□□□ -0.84
PPP4R1-202ENST00000400555 RIPPLY3P57055 190 aa9.79□□□□□ -0.84
PPP4R1-202ENST00000400555 C14orf178Q8N769 122 aaPredicted RBP9.79□□□□□ -0.84
PPP4R1-202ENST00000400555 NPFFO15130 113 aa9.78□□□□□ -0.84
PPP4R1-202ENST00000400555 SFTPCP11686 197 aa9.78□□□□□ -0.84
PPP4R1-202ENST00000400555 CRYBG3Q68DQ2 2970 aa9.78□□□□□ -0.84
PPP4R1-202ENST00000400555 PHLDA3Q9Y5J5 127 aa9.78□□□□□ -0.84
PPP4R1-202ENST00000400555 BSNQ9UPA5 3926 aa9.78□□□□□ -0.84
PPP4R1-202ENST00000400555 A0A096LNJ9 63 aa9.78□□□□□ -0.84
PPP4R1-202ENST00000400555 GNLYP22749 145 aa9.78□□□□□ -0.84
PPP4R1-202ENST00000400555 DEFB125Q8N687 156 aa9.78□□□□□ -0.84
PPP4R1-202ENST00000400555 NHP2Q9NX24 153 aaKnown RBP9.78□□□□□ -0.84
PPP4R1-202ENST00000400555 IGHV2-70DA0A0C4DH43 119 aa9.78□□□□□ -0.84
PPP4R1-202ENST00000400555 ODF3BA8MYP8 253 aa9.78□□□□□ -0.84
PPP4R1-202ENST00000400555 CRXO43186 299 aaPredicted RBP9.78□□□□□ -0.84
PPP4R1-202ENST00000400555 PAX8Q06710 450 aa9.78□□□□□ -0.84
PPP4R1-202ENST00000400555 MTURNQ8N3F0 131 aa9.78□□□□□ -0.84
PPP4R1-202ENST00000400555 C11orf21Q9P2W6 132 aa9.78□□□□□ -0.84
PPP4R1-202ENST00000400555 SMIM17P0DL12 118 aa9.77□□□□□ -0.85
PPP4R1-202ENST00000400555 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa9.77□□□□□ -0.85
PPP4R1-202ENST00000400555 MAPK1IP1LQ8NDC0 245 aa9.77□□□□□ -0.85
PPP4R1-202ENST00000400555 TRAV41A0A0B4J266 112 aa9.77□□□□□ -0.85
PPP4R1-202ENST00000400555 SMAD7O15105 426 aaKnown RBP9.77□□□□□ -0.85
PPP4R1-202ENST00000400555 MINOS1Q5TGZ0 78 aa9.77□□□□□ -0.85
PPP4R1-202ENST00000400555 FAM74A4Q5TZK3 123 aa9.77□□□□□ -0.85
PPP4R1-202ENST00000400555 ZNF502Q8TBZ5 544 aa9.77□□□□□ -0.85
PPP4R1-202ENST00000400555 CST9LQ9H4G1 147 aa9.77□□□□□ -0.85
PPP4R1-202ENST00000400555 MINOS1-NBL1R4GNA1 71 aa9.77□□□□□ -0.85
PPP4R1-202ENST00000400555 CD5LO43866 347 aa9.77□□□□□ -0.85
PPP4R1-202ENST00000400555 CCDC140Q96MF4 163 aa9.77□□□□□ -0.85
PPP4R1-202ENST00000400555 IGKV3D-20A0A0C4DH25 116 aa9.76□□□□□ -0.85
PPP4R1-202ENST00000400555 TMEM8BA6NDV4 472 aa9.76□□□□□ -0.85
PPP4R1-202ENST00000400555 FAM110DQ8TAY7 271 aaPredicted RBP9.76□□□□□ -0.85
PPP4R1-202ENST00000400555 UNQ9165/PRO28630Q6UXU0 137 aa9.76□□□□□ -0.85
PPP4R1-202ENST00000400555 OR2K2Q8NGT1 345 aa9.76□□□□□ -0.85
PPP4R1-202ENST00000400555 OR10J6PQ8NGY7 276 aa9.76□□□□□ -0.85
PPP4R1-202ENST00000400555 H3BUX3 64 aa9.76□□□□□ -0.85
PPP4R1-202ENST00000400555 SAP30O75446 220 aa9.76□□□□□ -0.85
PPP4R1-202ENST00000400555 UBE2E1P51965 193 aa9.76□□□□□ -0.85
PPP4R1-202ENST00000400555 C2orf91Q6ZV80 131 aa9.76□□□□□ -0.85
PPP4R1-202ENST00000400555 ABCA2Q9BZC7 2435 aa9.76□□□□□ -0.85
PPP4R1-202ENST00000400555 IGKV2D-26A0A0A0MRZ7 120 aa9.75□□□□□ -0.85
PPP4R1-202ENST00000400555 A0A0G2JLM5 398 aa9.75□□□□□ -0.85
PPP4R1-202ENST00000400555 C19orf84I3L1E1 186 aa9.75□□□□□ -0.85
PPP4R1-202ENST00000400555 IGHG4P01861 327 aa9.75□□□□□ -0.85
PPP4R1-202ENST00000400555 MRPL35Q9NZE8 188 aaKnown RBP9.75□□□□□ -0.85
PPP4R1-202ENST00000400555 CUBNO60494 3623 aa9.75□□□□□ -0.85
PPP4R1-202ENST00000400555 BLCAPP62952 87 aa9.75□□□□□ -0.85
PPP4R1-202ENST00000400555 TMEM95Q3KNT9 176 aa9.75□□□□□ -0.85
PPP4R1-202ENST00000400555 SPCS1Q9Y6A9 102 aa9.75□□□□□ -0.85
PPP4R1-202ENST00000400555 ATP5J2P56134 94 aa9.75□□□□□ -0.85
PPP4R1-202ENST00000400555 GTF2H5Q6ZYL4 71 aa9.75□□□□□ -0.85
PPP4R1-202ENST00000400555 CENPVL3A0A0U1RRI6 287 aa9.74□□□□□ -0.85
PPP4R1-202ENST00000400555 IGKCP01834 107 aa9.74□□□□□ -0.85
PPP4R1-202ENST00000400555 NRGNQ92686 78 aa9.74□□□□□ -0.85
PPP4R1-202ENST00000400555 SIRPDQ9H106 197 aa9.74□□□□□ -0.85
PPP4R1-202ENST00000400555 AGRNO00468 2067 aa9.74□□□□□ -0.85
PPP4R1-202ENST00000400555 DUX5Q96PT3 197 aa9.74□□□□□ -0.85
PPP4R1-202ENST00000400555 SLC50A1Q9BRV3 221 aa9.74□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 169.3 ms