RNA–Protein interactions for RNA: ENST00000399523.5

UFD1-202, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

TSL 1 (best) BASIC

Gene UFD1, Length 1,007 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-202ENST00000399523 IGLV2-11P01706 119 aa11.79□□□□□ -0.52
UFD1-202ENST00000399523 GATA1P15976 413 aaPredicted RBP11.79□□□□□ -0.52
UFD1-202ENST00000399523 RPL37AP61513 92 aaKnown RBP11.79□□□□□ -0.52
UFD1-202ENST00000399523 MUC21Q5SSG8 566 aa11.79□□□□□ -0.52
UFD1-202ENST00000399523 LELP1Q5T871 98 aa11.79□□□□□ -0.52
UFD1-202ENST00000399523 TMEM14CQ9P0S9 112 aa11.79□□□□□ -0.52
UFD1-202ENST00000399523 RSL24D1Q9UHA3 163 aaKnown RBP11.79□□□□□ -0.52
UFD1-202ENST00000399523 TRAV8-3A0A0A6YYJ7 113 aa11.78□□□□□ -0.52
UFD1-202ENST00000399523 FAUP35544 74 aaKnown RBP11.78□□□□□ -0.52
UFD1-202ENST00000399523 TAS2R30P59541 319 aa11.78□□□□□ -0.52
UFD1-202ENST00000399523 EXOC3-AS1Q8N2X6 119 aa11.78□□□□□ -0.52
UFD1-202ENST00000399523 OR1L4Q8NGR5 311 aa11.78□□□□□ -0.52
UFD1-202ENST00000399523 BAALCQ8WXS3 180 aa11.78□□□□□ -0.52
UFD1-202ENST00000399523 PFDN5Q99471 154 aa11.78□□□□□ -0.52
UFD1-202ENST00000399523 SLC25A21Q9BQT8 299 aaPredicted RBP11.78□□□□□ -0.52
UFD1-202ENST00000399523 TIMM9Q9Y5J7 89 aa11.78□□□□□ -0.52
UFD1-202ENST00000399523 CAMLGP49069 296 aa11.77□□□□□ -0.53
UFD1-202ENST00000399523 TMEM183BQ1AE95 376 aa11.77□□□□□ -0.53
UFD1-202ENST00000399523 MIC13Q5XKP0 118 aa11.77□□□□□ -0.53
UFD1-202ENST00000399523 TMEM183AQ8IXX5 376 aa11.77□□□□□ -0.53
UFD1-202ENST00000399523 C12orf45Q8N5I9 185 aaPredicted RBP11.77□□□□□ -0.53
UFD1-202ENST00000399523 SOSTQ9BQB4 213 aa11.77□□□□□ -0.53
UFD1-202ENST00000399523 RNF222A6NCQ9 220 aa11.76□□□□□ -0.53
UFD1-202ENST00000399523 ZNF138P52744 262 aa11.76□□□□□ -0.53
UFD1-202ENST00000399523 RAB31Q13636 194 aa11.76□□□□□ -0.53
UFD1-202ENST00000399523 ZNF266Q14584 549 aa11.76□□□□□ -0.53
UFD1-202ENST00000399523 Q8N976 141 aa11.76□□□□□ -0.53
UFD1-202ENST00000399523 AAMDCQ9H7C9 122 aa11.76□□□□□ -0.53
UFD1-202ENST00000399523 TRGV11A0A075B6L2 103 aa11.75□□□□□ -0.53
UFD1-202ENST00000399523 IGHV3-16A0A0C4DH30 117 aa11.75□□□□□ -0.53
UFD1-202ENST00000399523 FABP12A6NFH5 140 aa11.75□□□□□ -0.53
UFD1-202ENST00000399523 M0R2P5 195 aa11.75□□□□□ -0.53
UFD1-202ENST00000399523 UBE2MP61081 183 aaKnown RBP11.75□□□□□ -0.53
UFD1-202ENST00000399523 NRARPQ7Z6K4 114 aa11.75□□□□□ -0.53
UFD1-202ENST00000399523 Q8N3U1 123 aa11.75□□□□□ -0.53
UFD1-202ENST00000399523 COX11Q9Y6N1 276 aa11.75□□□□□ -0.53
UFD1-202ENST00000399523 Q6AWC8 147 aa11.74□□□□□ -0.53
UFD1-202ENST00000399523 FAM122CQ6P4D5 195 aa11.74□□□□□ -0.53
UFD1-202ENST00000399523 SLC25A29Q8N8R3 303 aa11.74□□□□□ -0.53
UFD1-202ENST00000399523 MCFD2Q8NI22 146 aa11.74□□□□□ -0.53
UFD1-202ENST00000399523 Q8TAT8 98 aa11.74□□□□□ -0.53
UFD1-202ENST00000399523 GTSF1LQ9H1H1 148 aa11.74□□□□□ -0.53
UFD1-202ENST00000399523 PYYP10082 97 aa11.73□□□□□ -0.53
UFD1-202ENST00000399523 BAK1Q16611 211 aa11.73□□□□□ -0.53
UFD1-202ENST00000399523 TOR2AQ5JU69 321 aa11.73□□□□□ -0.53
UFD1-202ENST00000399523 FAM159AQ6UWV7 190 aa11.73□□□□□ -0.53
UFD1-202ENST00000399523 ATP6V0E2Q8NHE4 81 aa11.73□□□□□ -0.53
UFD1-202ENST00000399523 C9orf170A2RU37 121 aa11.72□□□□□ -0.53
UFD1-202ENST00000399523 RPL29P47914 159 aaKnown RBP11.72□□□□□ -0.53
UFD1-202ENST00000399523 SPCS2Q15005 226 aa11.72□□□□□ -0.53
UFD1-202ENST00000399523 PRADC1Q9BSG0 188 aa11.72□□□□□ -0.53
UFD1-202ENST00000399523 SLC39A9Q9NUM3 307 aa11.72□□□□□ -0.53
UFD1-202ENST00000399523 TRBV6-4A0A1B0GX49 114 aa11.71□□□□□ -0.53
UFD1-202ENST00000399523 C7orf66A4D0T2 115 aa11.71□□□□□ -0.53
UFD1-202ENST00000399523 SCGB1D2O95969 90 aa11.71□□□□□ -0.53
UFD1-202ENST00000399523 ASIPP42127 132 aa11.71□□□□□ -0.53
UFD1-202ENST00000399523 AP3S2P59780 193 aa11.71□□□□□ -0.53
UFD1-202ENST00000399523 Q6ZRU5 148 aa11.71□□□□□ -0.53
UFD1-202ENST00000399523 DAZ4Q86SG3 579 aaKnown RBP11.71□□□□□ -0.53
UFD1-202ENST00000399523 TRIM63Q969Q1 353 aa11.71□□□□□ -0.53
UFD1-202ENST00000399523 DAZ3Q9NR90 486 aaKnown RBP11.71□□□□□ -0.53
UFD1-202ENST00000399523 WDR83OSQ9Y284 106 aa11.71□□□□□ -0.53
UFD1-202ENST00000399523 FBLL1A6NHQ2 334 aaKnown RBP11.7□□□□□ -0.54
UFD1-202ENST00000399523 RHOHQ15669 191 aa11.7□□□□□ -0.54
UFD1-202ENST00000399523 TOMM5Q8N4H5 51 aa11.7□□□□□ -0.54
UFD1-202ENST00000399523 DYNC2LI1Q8TCX1 351 aa11.7□□□□□ -0.54
UFD1-202ENST00000399523 PAXXQ9BUH6 204 aa11.7□□□□□ -0.54
UFD1-202ENST00000399523 GPN1Q9HCN4 374 aaPredicted RBP11.7□□□□□ -0.54
UFD1-202ENST00000399523 CHAC2Q8WUX2 184 aa11.69□□□□□ -0.54
UFD1-202ENST00000399523 RBAKDNA6NC62 111 aa11.68□□□□□ -0.54
UFD1-202ENST00000399523 GGTLC3B5MD39 225 aa11.68□□□□□ -0.54
UFD1-202ENST00000399523 GNRH2O43555 120 aa11.68□□□□□ -0.54
UFD1-202ENST00000399523 CIDEAO60543 219 aa11.68□□□□□ -0.54
UFD1-202ENST00000399523 IAH1Q2TAA2 248 aaPredicted RBP11.68□□□□□ -0.54
UFD1-202ENST00000399523 DEDD2Q8WXF8 326 aa11.68□□□□□ -0.54
UFD1-202ENST00000399523 RMI2Q96E14 147 aa11.68□□□□□ -0.54
UFD1-202ENST00000399523 C20orf85Q9H1P6 137 aa11.68□□□□□ -0.54
UFD1-202ENST00000399523 TRAV8-1A0A0A6YYK1 113 aa11.67□□□□□ -0.54
UFD1-202ENST00000399523 MBPP02686 304 aaPredicted RBP11.67□□□□□ -0.54
UFD1-202ENST00000399523 NBEAP1P0C6P0 100 aa11.67□□□□□ -0.54
UFD1-202ENST00000399523 VWC2Q2TAL6 325 aa11.67□□□□□ -0.54
UFD1-202ENST00000399523 FAM167A-AS1Q96KT0 104 aa11.67□□□□□ -0.54
UFD1-202ENST00000399523 SLC25A2Q9BXI2 301 aa11.67□□□□□ -0.54
UFD1-202ENST00000399523 UQCC1Q9NVA1 299 aa11.67□□□□□ -0.54
UFD1-202ENST00000399523 LENEPQ9Y5L5 61 aa11.67□□□□□ -0.54
UFD1-202ENST00000399523 SH3BGRL3Q9H299 93 aa11.66□□□□□ -0.54
UFD1-202ENST00000399523 GSKIPQ9P0R6 139 aa11.66□□□□□ -0.54
UFD1-202ENST00000399523 NAGKQ9UJ70 344 aa11.66□□□□□ -0.54
UFD1-202ENST00000399523 CFAP126Q5VTH2 177 aa11.65□□□□□ -0.54
UFD1-202ENST00000399523 CST7O76096 145 aa11.64□□□□□ -0.55
UFD1-202ENST00000399523 GCSAMLQ5JQS6 135 aa11.64□□□□□ -0.55
UFD1-202ENST00000399523 DNAJC30Q96LL9 226 aa11.64□□□□□ -0.55
UFD1-202ENST00000399523 RPH3ALQ9UNE2 315 aa11.64□□□□□ -0.55
UFD1-202ENST00000399523 IGKV2D-24A0A075B6R9 120 aa11.63□□□□□ -0.55
UFD1-202ENST00000399523 L7N2F9 121 aa11.63□□□□□ -0.55
UFD1-202ENST00000399523 TYMSP04818 313 aa11.63□□□□□ -0.55
UFD1-202ENST00000399523 OR10J4P0C629 311 aa11.63□□□□□ -0.55
UFD1-202ENST00000399523 SMIM18P0DKX4 95 aa11.63□□□□□ -0.55
UFD1-202ENST00000399523 CSN1S1P47710 185 aa11.63□□□□□ -0.55
UFD1-202ENST00000399523 CAV2P51636 162 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 109.7 ms