RNA–Protein interactions for RNA: ENST00000399002.6

SPTLC3-201, Transcript of serine palmitoyltransferase long chain base subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTLC3, Length 6,169 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC3-201ENST00000399002 C3orf56Q8N813 242 aa6.59□□□□□ -1.35
SPTLC3-201ENST00000399002 WDR81Q562E7 1941 aa6.59□□□□□ -1.35
SPTLC3-201ENST00000399002 G3V318 75 aa6.59□□□□□ -1.36
SPTLC3-201ENST00000399002 TDRD6O60522 2096 aaKnown RBP6.58□□□□□ -1.36
SPTLC3-201ENST00000399002 GAGE6Q13070 117 aa6.58□□□□□ -1.36
SPTLC3-201ENST00000399002 FAM215AQ9Y5M1 114 aa6.58□□□□□ -1.36
SPTLC3-201ENST00000399002 GAGE12HA6NDE8 117 aa6.58□□□□□ -1.36
SPTLC3-201ENST00000399002 RSPO3Q9BXY4 272 aaPredicted RBP6.58□□□□□ -1.36
SPTLC3-201ENST00000399002 TPSG1Q9NRR2 321 aa6.58□□□□□ -1.36
SPTLC3-201ENST00000399002 ZNRD1Q9P1U0 126 aa6.58□□□□□ -1.36
SPTLC3-201ENST00000399002 HIGD1BQ9P298 99 aa6.58□□□□□ -1.36
SPTLC3-201ENST00000399002 C22orf46C9J442 243 aa6.58□□□□□ -1.36
SPTLC3-201ENST00000399002 GAGE7O76087 117 aa6.58□□□□□ -1.36
SPTLC3-201ENST00000399002 CFC1BP0CG36 223 aa6.58□□□□□ -1.36
SPTLC3-201ENST00000399002 CFC1P0CG37 223 aa6.58□□□□□ -1.36
SPTLC3-201ENST00000399002 GAGE12FP0CL80 117 aa6.58□□□□□ -1.36
SPTLC3-201ENST00000399002 GAGE12GP0CL81 117 aa6.58□□□□□ -1.36
SPTLC3-201ENST00000399002 GAGE12IP0CL82 117 aa6.58□□□□□ -1.36
SPTLC3-201ENST00000399002 H0YGX0 51 aa6.58□□□□□ -1.36
SPTLC3-201ENST00000399002 GP9P14770 177 aa6.58□□□□□ -1.36
SPTLC3-201ENST00000399002 DEFB121Q5J5C9 76 aa6.58□□□□□ -1.36
SPTLC3-201ENST00000399002 CFHR4Q92496 578 aa6.58□□□□□ -1.36
SPTLC3-201ENST00000399002 THADAQ6YHU6 1953 aa6.58□□□□□ -1.36
SPTLC3-201ENST00000399002 WI2-2373I1.2A0A1W2PRP0 233 aa6.58□□□□□ -1.36
SPTLC3-201ENST00000399002 K7EQD1 137 aa6.58□□□□□ -1.36
SPTLC3-201ENST00000399002 NBL1P41271 181 aa6.58□□□□□ -1.36
SPTLC3-201ENST00000399002 FAM120AOSQ5T036 256 aa6.58□□□□□ -1.36
SPTLC3-201ENST00000399002 I3L2K1 104 aa6.57□□□□□ -1.36
SPTLC3-201ENST00000399002 TMEM258P61165 79 aa6.57□□□□□ -1.36
SPTLC3-201ENST00000399002 C9orf66Q5T8R8 295 aa6.57□□□□□ -1.36
SPTLC3-201ENST00000399002 C11orf53Q8IXP5 236 aa6.57□□□□□ -1.36
SPTLC3-201ENST00000399002 TRAV25A0A0B4J276 109 aa6.57□□□□□ -1.36
SPTLC3-201ENST00000399002 A0A1B0GUS0 222 aa6.57□□□□□ -1.36
SPTLC3-201ENST00000399002 KNCNA6PVL3 124 aa6.57□□□□□ -1.36
SPTLC3-201ENST00000399002 CR1LQ2VPA4 569 aa6.57□□□□□ -1.36
SPTLC3-201ENST00000399002 PRR31Q5SQ13 230 aa6.57□□□□□ -1.36
SPTLC3-201ENST00000399002 KLF2Q9Y5W3 355 aaPredicted RBP6.57□□□□□ -1.36
SPTLC3-201ENST00000399002 C16orf54Q6UWD8 224 aa6.57□□□□□ -1.36
SPTLC3-201ENST00000399002 DYNAPQ8N1N2 210 aa6.57□□□□□ -1.36
SPTLC3-201ENST00000399002 PRSS29PA6NIE9 313 aa6.57□□□□□ -1.36
SPTLC3-201ENST00000399002 DUX4L9Q6RFH8 374 aaPredicted RBP6.57□□□□□ -1.36
SPTLC3-201ENST00000399002 ZNF625Q96I27 306 aaPredicted RBP6.56□□□□□ -1.36
SPTLC3-201ENST00000399002 IGLV11-55A0A075B6I3 123 aa6.56□□□□□ -1.36
SPTLC3-201ENST00000399002 IGHV3-16A0A0C4DH30 117 aa6.56□□□□□ -1.36
SPTLC3-201ENST00000399002 WIPF3A6NGB9 483 aa6.56□□□□□ -1.36
SPTLC3-201ENST00000399002 K7EMT4 169 aa6.56□□□□□ -1.36
SPTLC3-201ENST00000399002 PFN2P35080 140 aa6.56□□□□□ -1.36
SPTLC3-201ENST00000399002 DEFB125Q8N687 156 aa6.56□□□□□ -1.36
SPTLC3-201ENST00000399002 EGR2P11161 476 aaPredicted RBP6.56□□□□□ -1.36
SPTLC3-201ENST00000399002 CXCL5P42830 114 aa6.56□□□□□ -1.36
SPTLC3-201ENST00000399002 ATG2BQ96BY7 2078 aa6.56□□□□□ -1.36
SPTLC3-201ENST00000399002 SMIM20Q8N5G0 67 aa6.56□□□□□ -1.36
SPTLC3-201ENST00000399002 C9orf47Q6ZRZ4 202 aa6.56□□□□□ -1.36
SPTLC3-201ENST00000399002 CACNA1CQ13936 2221 aa6.55□□□□□ -1.36
SPTLC3-201ENST00000399002 Q71RC1 249 aaPredicted RBP6.55□□□□□ -1.36
SPTLC3-201ENST00000399002 TOMM6Q96B49 74 aa6.55□□□□□ -1.36
SPTLC3-201ENST00000399002 ZMAT4Q9H898 229 aa6.55□□□□□ -1.36
SPTLC3-201ENST00000399002 TRAV12-2A0A075B6T6 113 aa6.55□□□□□ -1.36
SPTLC3-201ENST00000399002 CENPVL3A0A0U1RRI6 287 aa6.55□□□□□ -1.36
SPTLC3-201ENST00000399002 DOCK3Q8IZD9 2030 aa6.55□□□□□ -1.36
SPTLC3-201ENST00000399002 PRB4P10163 310 aaPredicted RBP6.55□□□□□ -1.36
SPTLC3-201ENST00000399002 PRR30Q53SZ7 412 aaPredicted RBP6.55□□□□□ -1.36
SPTLC3-201ENST00000399002 ATP6V0E2Q8NHE4 81 aa6.55□□□□□ -1.36
SPTLC3-201ENST00000399002 SUMO4Q6EEV6 95 aa6.55□□□□□ -1.36
SPTLC3-201ENST00000399002 AGPAT4-IT1Q9H0P7 198 aa6.55□□□□□ -1.36
SPTLC3-201ENST00000399002 DKK2Q9UBU2 259 aa6.55□□□□□ -1.36
SPTLC3-201ENST00000399002 CFHR3Q02985 330 aa6.55□□□□□ -1.36
SPTLC3-201ENST00000399002 SELENOKQ9Y6D0 94 aa6.55□□□□□ -1.36
SPTLC3-201ENST00000399002 ICOSQ9Y6W8 199 aa6.55□□□□□ -1.36
SPTLC3-201ENST00000399002 LY6HO94772 140 aa6.54□□□□□ -1.36
SPTLC3-201ENST00000399002 CRYGCP07315 174 aa6.54□□□□□ -1.36
SPTLC3-201ENST00000399002 A0A0B4J2C4 111 aa6.54□□□□□ -1.36
SPTLC3-201ENST00000399002 MORN5Q5VZ52 161 aa6.54□□□□□ -1.36
SPTLC3-201ENST00000399002 U3KQE9 123 aa6.54□□□□□ -1.36
SPTLC3-201ENST00000399002 C11orf86A6NJI1 115 aa6.54□□□□□ -1.36
SPTLC3-201ENST00000399002 TIMM17AQ99595 171 aa6.54□□□□□ -1.36
SPTLC3-201ENST00000399002 MRPL36Q9P0J6 103 aaKnown RBP6.54□□□□□ -1.36
SPTLC3-201ENST00000399002 IGHV3-38A0A0C4DH36 116 aa6.53□□□□□ -1.36
SPTLC3-201ENST00000399002 BAALC-AS2P0C853 105 aa6.53□□□□□ -1.36
SPTLC3-201ENST00000399002 DEFB104AQ8WTQ1 72 aa6.53□□□□□ -1.36
SPTLC3-201ENST00000399002 CTSZQ9UBR2 303 aa6.53□□□□□ -1.36
SPTLC3-201ENST00000399002 ANGP03950 147 aaKnown RBP6.53□□□□□ -1.36
SPTLC3-201ENST00000399002 NPSP0C0P6 89 aa6.53□□□□□ -1.36
SPTLC3-201ENST00000399002 CTRLP40313 264 aa6.53□□□□□ -1.36
SPTLC3-201ENST00000399002 C15orf53Q8NAA6 179 aa6.53□□□□□ -1.36
SPTLC3-201ENST00000399002 J3QKU1 62 aa6.53□□□□□ -1.36
SPTLC3-201ENST00000399002 DIAPH2-AS1Q14236 149 aa6.53□□□□□ -1.36
SPTLC3-201ENST00000399002 PIFOQ8TCI5 191 aa6.53□□□□□ -1.36
SPTLC3-201ENST00000399002 ZNF524Q96C55 264 aa6.53□□□□□ -1.36
SPTLC3-201ENST00000399002 IGLL5B9A064 214 aa6.52□□□□□ -1.36
SPTLC3-201ENST00000399002 H3BMG7 143 aa6.52□□□□□ -1.36
SPTLC3-201ENST00000399002 CCL24O00175 119 aa6.52□□□□□ -1.36
SPTLC3-201ENST00000399002 HAMPP81172 84 aa6.52□□□□□ -1.36
SPTLC3-201ENST00000399002 DAZAP2Q15038 168 aaPredicted RBP6.52□□□□□ -1.36
SPTLC3-201ENST00000399002 ZFP2Q6ZN57 461 aa6.52□□□□□ -1.36
SPTLC3-201ENST00000399002 C4orf3Q8WVX3 66 aa6.52□□□□□ -1.36
SPTLC3-201ENST00000399002 PRRC2BQ5JSZ5 2229 aaKnown RBP6.52□□□□□ -1.37
SPTLC3-201ENST00000399002 IGLV2-23P01705 113 aa6.52□□□□□ -1.37
SPTLC3-201ENST00000399002 COX7B2Q8TF08 81 aa6.52□□□□□ -1.37
SPTLC3-201ENST00000399002 Q9H8V8 135 aa6.52□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 189.8 ms