RNA–Protein interactions for RNA: ENST00000398729.1

VCX3A-202, Transcript of variable charge X-linked 3A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VCX3A, Length 808 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3A-202ENST00000398729 Q8TAT8 98 aa9.35□□□□□ -0.91
VCX3A-202ENST00000398729 MED28Q9H204 178 aa9.35□□□□□ -0.91
VCX3A-202ENST00000398729 TMPRSS5Q9H3S3 457 aa9.35□□□□□ -0.91
VCX3A-202ENST00000398729 LINC00588Q9Y4M8 146 aa9.35□□□□□ -0.91
VCX3A-202ENST00000398729 IGHV1OR15-1A0A075B7D0 117 aa9.34□□□□□ -0.91
VCX3A-202ENST00000398729 TRGV1A0A0A0MS02 117 aa9.34□□□□□ -0.91
VCX3A-202ENST00000398729 ZNF266Q14584 549 aa9.34□□□□□ -0.91
VCX3A-202ENST00000398729 FAM74A1Q5RGS3 127 aa9.34□□□□□ -0.91
VCX3A-202ENST00000398729 PQLC2Q6ZP29 291 aa9.34□□□□□ -0.91
VCX3A-202ENST00000398729 SSX7Q7RTT5 188 aa9.34□□□□□ -0.91
VCX3A-202ENST00000398729 C18orf15Q96N68 181 aa9.34□□□□□ -0.91
VCX3A-202ENST00000398729 ARPC5LQ9BPX5 153 aa9.34□□□□□ -0.91
VCX3A-202ENST00000398729 KLF12Q9Y4X4 402 aa9.34□□□□□ -0.91
VCX3A-202ENST00000398729 NBDYA0A0U1RRE5 68 aa9.33□□□□□ -0.92
VCX3A-202ENST00000398729 DIRC3C9JPN6 131 aa9.33□□□□□ -0.92
VCX3A-202ENST00000398729 SPINK4O60575 86 aa9.33□□□□□ -0.92
VCX3A-202ENST00000398729 EIF3GO75821 320 aaKnown RBP eCLIP9.33□□□□□ -0.92
VCX3A-202ENST00000398729 OR10G4Q8NGN3 311 aa9.33□□□□□ -0.92
VCX3A-202ENST00000398729 OR10G9Q8NGN4 311 aa9.33□□□□□ -0.92
VCX3A-202ENST00000398729 OR10G7Q8NGN6 311 aa9.33□□□□□ -0.92
VCX3A-202ENST00000398729 CMTM2Q8TAZ6 248 aa9.33□□□□□ -0.92
VCX3A-202ENST00000398729 HYLS1Q96M11 299 aa9.33□□□□□ -0.92
VCX3A-202ENST00000398729 OTORQ9NRC9 128 aa9.33□□□□□ -0.92
VCX3A-202ENST00000398729 TP53TG3Q9ULZ0 132 aa9.33□□□□□ -0.92
VCX3A-202ENST00000398729 LENEPQ9Y5L5 61 aa9.33□□□□□ -0.92
VCX3A-202ENST00000398729 PGPA6NDG6 321 aa9.32□□□□□ -0.92
VCX3A-202ENST00000398729 RAB2AP61019 212 aa9.32□□□□□ -0.92
VCX3A-202ENST00000398729 ZNF415Q09FC8 603 aa9.32□□□□□ -0.92
VCX3A-202ENST00000398729 Q6ZQT7 251 aa9.32□□□□□ -0.92
VCX3A-202ENST00000398729 ZNF575Q86XF7 245 aa9.32□□□□□ -0.92
VCX3A-202ENST00000398729 AQP10Q96PS8 301 aa9.32□□□□□ -0.92
VCX3A-202ENST00000398729 MUC21Q5SSG8 566 aa9.31□□□□□ -0.92
VCX3A-202ENST00000398729 ARL6IP6Q8N6S5 226 aa9.31□□□□□ -0.92
VCX3A-202ENST00000398729 TMED6Q8WW62 240 aa9.31□□□□□ -0.92
VCX3A-202ENST00000398729 Q9H8V8 135 aa9.31□□□□□ -0.92
VCX3A-202ENST00000398729 RPH3ALQ9UNE2 315 aa9.31□□□□□ -0.92
VCX3A-202ENST00000398729 HMGB3O15347 200 aaKnown RBP9.3□□□□□ -0.92
VCX3A-202ENST00000398729 GIPP09681 153 aaPredicted RBP9.3□□□□□ -0.92
VCX3A-202ENST00000398729 CDC34P49427 236 aaPredicted RBP9.3□□□□□ -0.92
VCX3A-202ENST00000398729 Q6AWC8 147 aa9.3□□□□□ -0.92
VCX3A-202ENST00000398729 FAM159AQ6UWV7 190 aa9.3□□□□□ -0.92
VCX3A-202ENST00000398729 HSD17B11Q8NBQ5 300 aa9.3□□□□□ -0.92
VCX3A-202ENST00000398729 OR2G3Q8NGZ4 309 aa9.3□□□□□ -0.92
VCX3A-202ENST00000398729 ASB13Q8WXK3 278 aa9.3□□□□□ -0.92
VCX3A-202ENST00000398729 VSIG2Q96IQ7 327 aa9.3□□□□□ -0.92
VCX3A-202ENST00000398729 ST6GAL2Q96JF0 529 aa9.3□□□□□ -0.92
VCX3A-202ENST00000398729 PSMG3Q9BT73 122 aaPredicted RBP9.3□□□□□ -0.92
VCX3A-202ENST00000398729 MRPL16Q9NX20 251 aaKnown RBP9.3□□□□□ -0.92
VCX3A-202ENST00000398729 MBP02144 154 aa9.29□□□□□ -0.92
VCX3A-202ENST00000398729 ARL14EPLP0DKL9 152 aa9.29□□□□□ -0.92
VCX3A-202ENST00000398729 ATP6V0CP27449 155 aa9.29□□□□□ -0.92
VCX3A-202ENST00000398729 ESRGQ1W209 222 aa9.29□□□□□ -0.92
VCX3A-202ENST00000398729 GOLT1AQ6ZVE7 132 aa9.29□□□□□ -0.92
VCX3A-202ENST00000398729 C6orf223Q8N319 242 aa9.29□□□□□ -0.92
VCX3A-202ENST00000398729 UPK3BQ9BT76 320 aa9.29□□□□□ -0.92
VCX3A-202ENST00000398729 TRGV11A0A075B6L2 103 aa9.28□□□□□ -0.92
VCX3A-202ENST00000398729 A0A096LPF7 62 aa9.28□□□□□ -0.92
VCX3A-202ENST00000398729 IGHV3-53P01767 116 aa9.28□□□□□ -0.92
VCX3A-202ENST00000398729 STAG3L2P0CL84 134 aa9.28□□□□□ -0.92
VCX3A-202ENST00000398729 STAG3L3P0CL85 134 aa9.28□□□□□ -0.92
VCX3A-202ENST00000398729 SERF2P84101 59 aa9.28□□□□□ -0.92
VCX3A-202ENST00000398729 SLAQ13239 276 aa9.28□□□□□ -0.92
VCX3A-202ENST00000398729 Q5BKY6 102 aa9.28□□□□□ -0.92
VCX3A-202ENST00000398729 TTC32Q5I0X7 151 aa9.28□□□□□ -0.92
VCX3A-202ENST00000398729 INO80EQ8NBZ0 244 aaPredicted RBP9.28□□□□□ -0.92
VCX3A-202ENST00000398729 MDFICQ9P1T7 246 aa9.28□□□□□ -0.92
VCX3A-202ENST00000398729 NAGKQ9UJ70 344 aa9.28□□□□□ -0.92
VCX3A-202ENST00000398729 MRPS16Q9Y3D3 137 aaKnown RBP9.28□□□□□ -0.92
VCX3A-202ENST00000398729 PAX4O43316 350 aa9.27□□□□□ -0.93
VCX3A-202ENST00000398729 TMEM183BQ1AE95 376 aa9.27□□□□□ -0.93
VCX3A-202ENST00000398729 TMEM183AQ8IXX5 376 aa9.27□□□□□ -0.93
VCX3A-202ENST00000398729 RAB24Q969Q5 203 aa9.27□□□□□ -0.93
VCX3A-202ENST00000398729 SPXQ9BT56 116 aa9.27□□□□□ -0.93
VCX3A-202ENST00000398729 PRO0255Q9UI72 69 aa9.27□□□□□ -0.93
VCX3A-202ENST00000398729 ICOSQ9Y6W8 199 aa9.27□□□□□ -0.93
VCX3A-202ENST00000398729 TRAV8-1A0A0A6YYK1 113 aa9.26□□□□□ -0.93
VCX3A-202ENST00000398729 TRAV21A0A0B4J279 112 aa9.26□□□□□ -0.93
VCX3A-202ENST00000398729 SERTM2A0A1B0GWG4 89 aa9.26□□□□□ -0.93
VCX3A-202ENST00000398729 GCHFRP30047 84 aa9.26□□□□□ -0.93
VCX3A-202ENST00000398729 GNG5P63218 68 aa9.26□□□□□ -0.93
VCX3A-202ENST00000398729 TDRG1Q3Y452 100 aa9.26□□□□□ -0.93
VCX3A-202ENST00000398729 C5orf17Q8NAS9 161 aa9.26□□□□□ -0.93
VCX3A-202ENST00000398729 NDFIP1Q9BT67 221 aa9.26□□□□□ -0.93
VCX3A-202ENST00000398729 ACTR3CQ9C0K3 210 aaPredicted RBP9.26□□□□□ -0.93
VCX3A-202ENST00000398729 TREM1Q9NP99 234 aa9.26□□□□□ -0.93
VCX3A-202ENST00000398729 TNFSF18Q9UNG2 199 aa9.26□□□□□ -0.93
VCX3A-202ENST00000398729 HHLA3Q9XRX5 114 aa9.26□□□□□ -0.93
VCX3A-202ENST00000398729 FXYD6-FXYD2A0A087WZ82 144 aa9.25□□□□□ -0.93
VCX3A-202ENST00000398729 BORCS7-ASMTA0A0B4J1R7 106 aa9.25□□□□□ -0.93
VCX3A-202ENST00000398729 F6UZH7 168 aa9.25□□□□□ -0.93
VCX3A-202ENST00000398729 K7EQM0 130 aa9.25□□□□□ -0.93
VCX3A-202ENST00000398729 CXorf1O96002 111 aa9.25□□□□□ -0.93
VCX3A-202ENST00000398729 CRYBA4P53673 196 aa9.25□□□□□ -0.93
VCX3A-202ENST00000398729 TNP2Q05952 138 aa9.25□□□□□ -0.93
VCX3A-202ENST00000398729 FHL2Q14192 279 aa9.25□□□□□ -0.93
VCX3A-202ENST00000398729 SUN5Q8TC36 379 aa9.25□□□□□ -0.93
VCX3A-202ENST00000398729 RASL10AQ92737 203 aa9.25□□□□□ -0.93
VCX3A-202ENST00000398729 SH3BGRL3Q9H299 93 aa9.25□□□□□ -0.93
VCX3A-202ENST00000398729 TMEM167BQ9NRX6 74 aa9.25□□□□□ -0.93
VCX3A-202ENST00000398729 TRGV4A0A0C4DH28 118 aa9.24□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms