RNA–Protein interactions for RNA: ENST00000398587.6

PCDHGA11-201, Transcript of protocadherin gamma subfamily A, 11, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGA11, Length 4,647 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11-201ENST00000398587 Q8N8P6 123 aa11.19□□□□□ -0.62
PCDHGA11-201ENST00000398587 RNASE1P07998 156 aaKnown RBP11.18□□□□□ -0.62
PCDHGA11-201ENST00000398587 CDKN1BP46527 198 aa11.18□□□□□ -0.62
PCDHGA11-201ENST00000398587 ANXA2RQ3ZCQ2 193 aa11.18□□□□□ -0.62
PCDHGA11-201ENST00000398587 MORN3Q6PF18 240 aaPredicted RBP11.18□□□□□ -0.62
PCDHGA11-201ENST00000398587 Q6ZPA2 131 aa11.18□□□□□ -0.62
PCDHGA11-201ENST00000398587 OR5A1Q8NGJ0 315 aa11.18□□□□□ -0.62
PCDHGA11-201ENST00000398587 CEP192Q8TEP8 1941 aa11.18□□□□□ -0.62
PCDHGA11-201ENST00000398587 IGHV3-64A0A075B6Q5 118 aa11.18□□□□□ -0.62
PCDHGA11-201ENST00000398587 C21orf62-AS1Q17RA5 79 aa11.18□□□□□ -0.62
PCDHGA11-201ENST00000398587 A0A087X0K7 114 aa11.18□□□□□ -0.62
PCDHGA11-201ENST00000398587 MALP21145 153 aa11.18□□□□□ -0.62
PCDHGA11-201ENST00000398587 PTPRSQ13332 1948 aa11.18□□□□□ -0.62
PCDHGA11-201ENST00000398587 GP9P14770 177 aa11.18□□□□□ -0.62
PCDHGA11-201ENST00000398587 SFTA2Q6UW10 78 aa11.18□□□□□ -0.62
PCDHGA11-201ENST00000398587 VPREB3Q9UKI3 123 aa11.18□□□□□ -0.62
PCDHGA11-201ENST00000398587 IGHV4-59P01825 116 aa11.17□□□□□ -0.62
PCDHGA11-201ENST00000398587 Q6ZWC4 215 aa11.17□□□□□ -0.62
PCDHGA11-201ENST00000398587 MRPL53Q96EL3 112 aaKnown RBP11.17□□□□□ -0.62
PCDHGA11-201ENST00000398587 IGHV4-30-2A0A087WSY4 118 aa11.17□□□□□ -0.62
PCDHGA11-201ENST00000398587 A0A087WX48 190 aa11.17□□□□□ -0.62
PCDHGA11-201ENST00000398587 IGLV2-23P01705 113 aa11.17□□□□□ -0.62
PCDHGA11-201ENST00000398587 P0C879 139 aa11.17□□□□□ -0.62
PCDHGA11-201ENST00000398587 C10orf105Q8TEF2 133 aa11.17□□□□□ -0.62
PCDHGA11-201ENST00000398587 XCL2Q9UBD3 114 aa11.17□□□□□ -0.62
PCDHGA11-201ENST00000398587 LENEPQ9Y5L5 61 aa11.17□□□□□ -0.62
PCDHGA11-201ENST00000398587 KLF2Q9Y5W3 355 aaPredicted RBP11.17□□□□□ -0.62
PCDHGA11-201ENST00000398587 CHD3Q12873 2000 aaKnown RBP11.17□□□□□ -0.62
PCDHGA11-201ENST00000398587 C2orf66Q6UXQ4 117 aa11.17□□□□□ -0.62
PCDHGA11-201ENST00000398587 IGFBPL1Q8WX77 278 aa11.17□□□□□ -0.62
PCDHGA11-201ENST00000398587 KMT2EQ8IZD2 1858 aa11.17□□□□□ -0.62
PCDHGA11-201ENST00000398587 Q8N9W7 124 aa11.16□□□□□ -0.62
PCDHGA11-201ENST00000398587 AGPAT4-IT1Q9H0P7 198 aa11.16□□□□□ -0.62
PCDHGA11-201ENST00000398587 DYSFO75923 2080 aa11.16□□□□□ -0.62
PCDHGA11-201ENST00000398587 PROP1O75360 226 aa11.16□□□□□ -0.62
PCDHGA11-201ENST00000398587 WNK1Q9H4A3 2382 aa11.16□□□□□ -0.62
PCDHGA11-201ENST00000398587 RBMY1BA6NDE4 496 aaKnown RBP11.16□□□□□ -0.62
PCDHGA11-201ENST00000398587 RBMY1EA6NEQ0 496 aaKnown RBP11.16□□□□□ -0.62
PCDHGA11-201ENST00000398587 RBMY1DP0C7P1 496 aaKnown RBP11.16□□□□□ -0.62
PCDHGA11-201ENST00000398587 RBMY1A1P0DJD3 496 aaKnown RBP11.16□□□□□ -0.62
PCDHGA11-201ENST00000398587 RBMY1CP0DJD4 496 aa11.16□□□□□ -0.62
PCDHGA11-201ENST00000398587 HLA-DMBP28068 263 aa11.16□□□□□ -0.62
PCDHGA11-201ENST00000398587 WIPF2Q8TF74 440 aaPredicted RBP11.16□□□□□ -0.62
PCDHGA11-201ENST00000398587 LINC00574Q9H8X3 128 aa11.16□□□□□ -0.62
PCDHGA11-201ENST00000398587 MYO18BQ8IUG5 2567 aa11.16□□□□□ -0.62
PCDHGA11-201ENST00000398587 SAMD5Q5TGI4 173 aa11.16□□□□□ -0.62
PCDHGA11-201ENST00000398587 MORN5Q5VZ52 161 aa11.16□□□□□ -0.62
PCDHGA11-201ENST00000398587 Q8N7P7 452 aa11.16□□□□□ -0.62
PCDHGA11-201ENST00000398587 FAM167A-AS1Q96KT0 104 aa11.16□□□□□ -0.62
PCDHGA11-201ENST00000398587 CTSGP08311 255 aa11.15□□□□□ -0.62
PCDHGA11-201ENST00000398587 DYNAPQ8N1N2 210 aa11.15□□□□□ -0.62
PCDHGA11-201ENST00000398587 NAV2Q8IVL1 2488 aa11.15□□□□□ -0.62
PCDHGA11-201ENST00000398587 C1orf159Q96HA4 380 aa11.15□□□□□ -0.62
PCDHGA11-201ENST00000398587 KLK9Q9UKQ9 250 aa11.15□□□□□ -0.62
PCDHGA11-201ENST00000398587 CCDC168Q8NDH2 2452 aa11.15□□□□□ -0.62
PCDHGA11-201ENST00000398587 IGKV1OR2-108A0A075B7D4 117 aa11.15□□□□□ -0.62
PCDHGA11-201ENST00000398587 ASPHD1Q5U4P2 390 aa11.15□□□□□ -0.62
PCDHGA11-201ENST00000398587 STPG4Q8N801 248 aa11.15□□□□□ -0.62
PCDHGA11-201ENST00000398587 LY6G5BQ8NDX9 201 aa11.15□□□□□ -0.62
PCDHGA11-201ENST00000398587 RBAKDNA6NC62 111 aa11.15□□□□□ -0.63
PCDHGA11-201ENST00000398587 A8MWV9 139 aa11.15□□□□□ -0.63
PCDHGA11-201ENST00000398587 TEX22C9J3V5 150 aa11.15□□□□□ -0.63
PCDHGA11-201ENST00000398587 ATP6V0BQ99437 205 aa11.15□□□□□ -0.63
PCDHGA11-201ENST00000398587 SIGLEC8Q9NYZ4 499 aa11.15□□□□□ -0.63
PCDHGA11-201ENST00000398587 IGHV1-24A0A0C4DH33 117 aa11.14□□□□□ -0.63
PCDHGA11-201ENST00000398587 A0A0U1RRA0 63 aa11.14□□□□□ -0.63
PCDHGA11-201ENST00000398587 KNCNA6PVL3 124 aa11.14□□□□□ -0.63
PCDHGA11-201ENST00000398587 CRYGCP07315 174 aa11.14□□□□□ -0.63
PCDHGA11-201ENST00000398587 IGHV4-38-2P0DP08 117 aa11.14□□□□□ -0.63
PCDHGA11-201ENST00000398587 COA6Q5JTJ3 125 aaKnown RBP11.14□□□□□ -0.63
PCDHGA11-201ENST00000398587 HIVEP2P31629 2446 aa11.14□□□□□ -0.63
PCDHGA11-201ENST00000398587 RASL10AQ92737 203 aa11.14□□□□□ -0.63
PCDHGA11-201ENST00000398587 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.14□□□□□ -0.63
PCDHGA11-201ENST00000398587 PHLDA1Q8WV24 401 aaPredicted RBP11.14□□□□□ -0.63
PCDHGA11-201ENST00000398587 ERG28Q9UKR5 140 aa11.14□□□□□ -0.63
PCDHGA11-201ENST00000398587 SDHAF1A6NFY7 115 aa11.13□□□□□ -0.63
PCDHGA11-201ENST00000398587 NPYP01303 97 aa11.13□□□□□ -0.63
PCDHGA11-201ENST00000398587 TP53TG1Q9Y2A0 90 aa11.13□□□□□ -0.63
PCDHGA11-201ENST00000398587 TRAV12-2A0A075B6T6 113 aa11.13□□□□□ -0.63
PCDHGA11-201ENST00000398587 E7EUB6 86 aa11.13□□□□□ -0.63
PCDHGA11-201ENST00000398587 EGR2P11161 476 aaPredicted RBP11.13□□□□□ -0.63
PCDHGA11-201ENST00000398587 ZFP36P26651 326 aaKnown RBP11.13□□□□□ -0.63
PCDHGA11-201ENST00000398587 SMIM2Q9BVW6 85 aa11.13□□□□□ -0.63
PCDHGA11-201ENST00000398587 DLEU1O43261 78 aa11.13□□□□□ -0.63
PCDHGA11-201ENST00000398587 CRPP02741 224 aa11.13□□□□□ -0.63
PCDHGA11-201ENST00000398587 IGLC2P0DOY2 106 aa11.12□□□□□ -0.63
PCDHGA11-201ENST00000398587 IGLC3P0DOY3 106 aa11.12□□□□□ -0.63
PCDHGA11-201ENST00000398587 RIPPLY3P57055 190 aa11.12□□□□□ -0.63
PCDHGA11-201ENST00000398587 BLCAPP62952 87 aa11.12□□□□□ -0.63
PCDHGA11-201ENST00000398587 DEFB113Q30KQ7 82 aa11.12□□□□□ -0.63
PCDHGA11-201ENST00000398587 TMEM86BQ8N661 226 aa11.12□□□□□ -0.63
PCDHGA11-201ENST00000398587 NUP210LQ5VU65 1888 aa11.12□□□□□ -0.63
PCDHGA11-201ENST00000398587 BRWD1-AS2P59051 145 aa11.12□□□□□ -0.63
PCDHGA11-201ENST00000398587 LGALS1P09382 135 aaKnown RBP11.12□□□□□ -0.63
PCDHGA11-201ENST00000398587 LGALS9BQ3B8N2 356 aa11.12□□□□□ -0.63
PCDHGA11-201ENST00000398587 LGALS9CQ6DKI2 356 aa11.12□□□□□ -0.63
PCDHGA11-201ENST00000398587 GOLGB1Q14789 3259 aaKnown RBP11.11□□□□□ -0.63
PCDHGA11-201ENST00000398587 CD5LO43866 347 aa11.11□□□□□ -0.63
PCDHGA11-201ENST00000398587 C22orf34Q6ZV56 151 aa11.11□□□□□ -0.63
PCDHGA11-201ENST00000398587 TMEM141Q96I45 108 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms