RNA–Protein interactions for RNA: ENST00000396828.8

NEDD8-202, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 2

Gene NEDD8, Length 626 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-202ENST00000396828 TMEM75Q8N9X5 138 aa7.51□□□□□ -1.21
NEDD8-202ENST00000396828 OR10J6PQ8NGY7 276 aa7.51□□□□□ -1.21
NEDD8-202ENST00000396828 OR11H2Q8NH07 326 aa7.51□□□□□ -1.21
NEDD8-202ENST00000396828 C2CD4CQ8TF44 421 aa7.51□□□□□ -1.21
NEDD8-202ENST00000396828 NIPSNAP3BQ9BS92 247 aa7.51□□□□□ -1.21
NEDD8-202ENST00000396828 DERL1Q9BUN8 251 aa7.51□□□□□ -1.21
NEDD8-202ENST00000396828 IGKV2-40A0A087WW87 121 aaPredicted RBP7.5□□□□□ -1.21
NEDD8-202ENST00000396828 C9JCJ5 164 aa7.5□□□□□ -1.21
NEDD8-202ENST00000396828 IGKV2D-40P01614 121 aaPredicted RBP7.5□□□□□ -1.21
NEDD8-202ENST00000396828 GIG44P09565 113 aaPredicted RBP7.5□□□□□ -1.21
NEDD8-202ENST00000396828 TMEM241Q24JQ0 296 aa7.5□□□□□ -1.21
NEDD8-202ENST00000396828 EBLN2Q6P2I7 272 aa7.5□□□□□ -1.21
NEDD8-202ENST00000396828 C11orf45Q8TAV5 145 aa7.5□□□□□ -1.21
NEDD8-202ENST00000396828 C20orf173Q96LM9 149 aa7.5□□□□□ -1.21
NEDD8-202ENST00000396828 LINC00479Q96M42 142 aa7.5□□□□□ -1.21
NEDD8-202ENST00000396828 KLF12Q9Y4X4 402 aa7.5□□□□□ -1.21
NEDD8-202ENST00000396828 DYNC1H1Q14204 4646 aaKnown RBP7.5□□□□□ -1.21
NEDD8-202ENST00000396828 TRAV34A0A0B4J273 112 aa7.49□□□□□ -1.21
NEDD8-202ENST00000396828 TRBV6-1A0A0K0K1D8 114 aa7.49□□□□□ -1.21
NEDD8-202ENST00000396828 PRAC2D3DTV9 90 aa7.49□□□□□ -1.21
NEDD8-202ENST00000396828 CA1P00915 261 aaPredicted RBP7.49□□□□□ -1.21
NEDD8-202ENST00000396828 DEFB131AP59861 70 aa7.49□□□□□ -1.21
NEDD8-202ENST00000396828 FLI1Q01543 452 aaPredicted RBP7.49□□□□□ -1.21
NEDD8-202ENST00000396828 CENPWQ5EE01 88 aa7.49□□□□□ -1.21
NEDD8-202ENST00000396828 C10orf91Q5T1B1 145 aa7.49□□□□□ -1.21
NEDD8-202ENST00000396828 TMEM78Q5T7P6 136 aa7.49□□□□□ -1.21
NEDD8-202ENST00000396828 PRNTQ86SH4 94 aa7.49□□□□□ -1.21
NEDD8-202ENST00000396828 SMIM12Q96EX1 92 aa7.49□□□□□ -1.21
NEDD8-202ENST00000396828 NDFIP1Q9BT67 221 aa7.49□□□□□ -1.21
NEDD8-202ENST00000396828 NAT8Q9UHE5 227 aa7.49□□□□□ -1.21
NEDD8-202ENST00000396828 CARHSP1Q9Y2V2 147 aaKnown RBP7.49□□□□□ -1.21
NEDD8-202ENST00000396828 PCLOQ9Y6V0 5065 aa7.49□□□□□ -1.21
NEDD8-202ENST00000396828 TRAV8-1A0A0A6YYK1 113 aa7.48□□□□□ -1.21
NEDD8-202ENST00000396828 DUSP14O95147 198 aaKnown RBP7.48□□□□□ -1.21
NEDD8-202ENST00000396828 APOC3P02656 99 aa7.48□□□□□ -1.21
NEDD8-202ENST00000396828 RBMY1A1P0DJD3 496 aaKnown RBP7.48□□□□□ -1.21
NEDD8-202ENST00000396828 RBMY1CP0DJD4 496 aa7.48□□□□□ -1.21
NEDD8-202ENST00000396828 ADCYAP1P18509 176 aa7.48□□□□□ -1.21
NEDD8-202ENST00000396828 HIST1H1AQ02539 215 aaPredicted RBP7.48□□□□□ -1.21
NEDD8-202ENST00000396828 PNRC1Q12796 327 aaPredicted RBP7.48□□□□□ -1.21
NEDD8-202ENST00000396828 RBMY1FQ15415 496 aaKnown RBP7.48□□□□□ -1.21
NEDD8-202ENST00000396828 SAPCD1Q5SSQ6 148 aa7.48□□□□□ -1.21
NEDD8-202ENST00000396828 FOXI2Q6ZQN5 318 aa7.48□□□□□ -1.21
NEDD8-202ENST00000396828 C9orf47Q6ZRZ4 202 aa7.48□□□□□ -1.21
NEDD8-202ENST00000396828 Q86TA4 180 aa7.48□□□□□ -1.21
NEDD8-202ENST00000396828 BAGE2Q86Y30 109 aa7.48□□□□□ -1.21
NEDD8-202ENST00000396828 SVBPQ8N300 66 aa7.48□□□□□ -1.21
NEDD8-202ENST00000396828 OR8A1Q8NGG7 326 aa7.48□□□□□ -1.21
NEDD8-202ENST00000396828 TVP23CQ96ET8 276 aa7.48□□□□□ -1.21
NEDD8-202ENST00000396828 SGK494Q96LW2 274 aa7.48□□□□□ -1.21
NEDD8-202ENST00000396828 LINC00477Q96M19 166 aa7.48□□□□□ -1.21
NEDD8-202ENST00000396828 VGLL1Q99990 258 aa7.48□□□□□ -1.21
NEDD8-202ENST00000396828 C11orf68Q9H3H3 251 aaKnown RBP7.48□□□□□ -1.21
NEDD8-202ENST00000396828 PPP1R14DQ9NXH3 145 aa7.48□□□□□ -1.21
NEDD8-202ENST00000396828 PSG8Q9UQ74 426 aa7.48□□□□□ -1.21
NEDD8-202ENST00000396828 ZFP30Q9Y2G7 519 aa7.48□□□□□ -1.21
NEDD8-202ENST00000396828 LY96Q9Y6Y9 160 aa7.48□□□□□ -1.21
NEDD8-202ENST00000396828 NPIPB6E9PJ23 425 aa7.47□□□□□ -1.21
NEDD8-202ENST00000396828 M0R036 132 aa7.47□□□□□ -1.21
NEDD8-202ENST00000396828 LTAP01374 205 aa7.47□□□□□ -1.21
NEDD8-202ENST00000396828 IGLV2-11P01706 119 aa7.47□□□□□ -1.21
NEDD8-202ENST00000396828 PRB4P10163 310 aaPredicted RBP7.47□□□□□ -1.21
NEDD8-202ENST00000396828 ZNF138P52744 262 aa7.47□□□□□ -1.21
NEDD8-202ENST00000396828 ERCC8Q13216 396 aa7.47□□□□□ -1.21
NEDD8-202ENST00000396828 Q8NAQ8 132 aa7.47□□□□□ -1.21
NEDD8-202ENST00000396828 IGF2BP2-AS1Q96M15 143 aa7.47□□□□□ -1.21
NEDD8-202ENST00000396828 AGPAT4-IT1Q9H0P7 198 aa7.47□□□□□ -1.21
NEDD8-202ENST00000396828 SAV1Q9H4B6 383 aaPredicted RBP7.47□□□□□ -1.21
NEDD8-202ENST00000396828 SDF2L1Q9HCN8 221 aa7.47□□□□□ -1.21
NEDD8-202ENST00000396828 BIN3Q9NQY0 253 aa7.47□□□□□ -1.21
NEDD8-202ENST00000396828 APLNQ9ULZ1 77 aa7.47□□□□□ -1.21
NEDD8-202ENST00000396828 TRBV20OR9-2A0A075B6H5 130 aa7.46□□□□□ -1.22
NEDD8-202ENST00000396828 A0A0J9YX75 114 aa7.46□□□□□ -1.22
NEDD8-202ENST00000396828 KNCNA6PVL3 124 aa7.46□□□□□ -1.22
NEDD8-202ENST00000396828 F6UB75 175 aa7.46□□□□□ -1.22
NEDD8-202ENST00000396828 SNAPINO95295 136 aa7.46□□□□□ -1.22
NEDD8-202ENST00000396828 ZNF705DP0CH99 300 aaPredicted RBP7.46□□□□□ -1.22
NEDD8-202ENST00000396828 ZNF705BP0CI00 300 aaPredicted RBP7.46□□□□□ -1.22
NEDD8-202ENST00000396828 MGST1P10620 155 aaKnown RBP7.46□□□□□ -1.22
NEDD8-202ENST00000396828 ADIRFQ15847 76 aa7.46□□□□□ -1.22
NEDD8-202ENST00000396828 TRPT1Q86TN4 253 aaKnown RBP7.46□□□□□ -1.22
NEDD8-202ENST00000396828 LINC01551Q86U37 167 aa7.46□□□□□ -1.22
NEDD8-202ENST00000396828 TMEM183AQ8IXX5 376 aa7.46□□□□□ -1.22
NEDD8-202ENST00000396828 OR4B1Q8NGF8 309 aa7.46□□□□□ -1.22
NEDD8-202ENST00000396828 OCC1Q8TAD7 63 aa7.46□□□□□ -1.22
NEDD8-202ENST00000396828 ZNF492Q9P255 531 aa7.46□□□□□ -1.22
NEDD8-202ENST00000396828 LENEPQ9Y5L5 61 aa7.46□□□□□ -1.22
NEDD8-202ENST00000396828 DNAH11Q96DT5 4516 aa7.46□□□□□ -1.22
NEDD8-202ENST00000396828 RYR1P21817 5038 aa7.45□□□□□ -1.22
NEDD8-202ENST00000396828 IGHV4-28A0A0C4DH34 117 aa7.45□□□□□ -1.22
NEDD8-202ENST00000396828 PGPEP1LA6NFU8 196 aa7.45□□□□□ -1.22
NEDD8-202ENST00000396828 B4DEV8 164 aa7.45□□□□□ -1.22
NEDD8-202ENST00000396828 IGLL5B9A064 214 aa7.45□□□□□ -1.22
NEDD8-202ENST00000396828 J3QL48 77 aa7.45□□□□□ -1.22
NEDD8-202ENST00000396828 CT45A10P0DMU9 189 aa7.45□□□□□ -1.22
NEDD8-202ENST00000396828 RPL23P62829 140 aaKnown RBP7.45□□□□□ -1.22
NEDD8-202ENST00000396828 ACTL10Q5JWF8 245 aa7.45□□□□□ -1.22
NEDD8-202ENST00000396828 NHLRC2Q8NBF2 726 aa7.45□□□□□ -1.22
NEDD8-202ENST00000396828 Q8TAT8 98 aa7.45□□□□□ -1.22
NEDD8-202ENST00000396828 X6R8D5 127 aa7.45□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms