RNA–Protein interactions for RNA: ENST00000396551.7

TRIM39-205, Transcript of tripartite motif containing 39, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TRIM39, Length 3,249 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-205ENST00000396551 IGHV3-11P01762 117 aa12.65□□□□□ -0.38
TRIM39-205ENST00000396551 FA2HQ7L5A8 372 aa12.65□□□□□ -0.38
TRIM39-205ENST00000396551 MCRIP2Q9BUT9 160 aaKnown RBP12.65□□□□□ -0.38
TRIM39-205ENST00000396551 CNFNQ9BYD5 112 aa12.65□□□□□ -0.38
TRIM39-205ENST00000396551 A0A096LNJ9 63 aa12.65□□□□□ -0.38
TRIM39-205ENST00000396551 IGKV3D-20A0A0C4DH25 116 aa12.65□□□□□ -0.38
TRIM39-205ENST00000396551 LOC389332A0A1B0GUA5 103 aa12.65□□□□□ -0.38
TRIM39-205ENST00000396551 BRI3O95415 125 aa12.65□□□□□ -0.38
TRIM39-205ENST00000396551 LCNL1Q6ZST4 164 aa12.65□□□□□ -0.38
TRIM39-205ENST00000396551 GPHB5Q86YW7 130 aa12.65□□□□□ -0.38
TRIM39-205ENST00000396551 ORMDL3Q8N138 153 aa12.65□□□□□ -0.38
TRIM39-205ENST00000396551 C20orf173Q96LM9 149 aa12.65□□□□□ -0.38
TRIM39-205ENST00000396551 TIMM8BQ9Y5J9 83 aaPredicted RBP12.65□□□□□ -0.38
TRIM39-205ENST00000396551 C9orf47Q6ZRZ4 202 aa12.64□□□□□ -0.39
TRIM39-205ENST00000396551 MAP1AP78559 2803 aaPredicted RBP12.64□□□□□ -0.39
TRIM39-205ENST00000396551 C20orf202A1L168 122 aa12.64□□□□□ -0.39
TRIM39-205ENST00000396551 B4DSR2 109 aa12.64□□□□□ -0.39
TRIM39-205ENST00000396551 H3BUA1 57 aa12.64□□□□□ -0.39
TRIM39-205ENST00000396551 NDUFA4O00483 81 aa12.64□□□□□ -0.39
TRIM39-205ENST00000396551 ACACBO00763 2458 aa12.64□□□□□ -0.39
TRIM39-205ENST00000396551 TMEM78Q5T7P6 136 aa12.64□□□□□ -0.39
TRIM39-205ENST00000396551 Q6ZQT7 251 aa12.64□□□□□ -0.39
TRIM39-205ENST00000396551 RNF185Q96GF1 192 aa12.64□□□□□ -0.39
TRIM39-205ENST00000396551 C16orf92Q96LL3 132 aa12.64□□□□□ -0.39
TRIM39-205ENST00000396551 MAP1LC3CQ9BXW4 147 aa12.64□□□□□ -0.39
TRIM39-205ENST00000396551 CSMD2Q7Z408 3487 aa12.63□□□□□ -0.39
TRIM39-205ENST00000396551 PRB1P04280 392 aa12.63□□□□□ -0.39
TRIM39-205ENST00000396551 HNRNPA3P51991 378 aaKnown RBP12.63□□□□□ -0.39
TRIM39-205ENST00000396551 TMEM191AQ9H0A3 160 aa12.63□□□□□ -0.39
TRIM39-205ENST00000396551 HSPB8Q9UJY1 196 aa12.63□□□□□ -0.39
TRIM39-205ENST00000396551 NCR2O95944 276 aa12.63□□□□□ -0.39
TRIM39-205ENST00000396551 NPYP01303 97 aa12.63□□□□□ -0.39
TRIM39-205ENST00000396551 PET117Q6UWS5 81 aa12.63□□□□□ -0.39
TRIM39-205ENST00000396551 SMIM15Q7Z3B0 74 aa12.63□□□□□ -0.39
TRIM39-205ENST00000396551 ZNF747Q9BV97 191 aa12.63□□□□□ -0.39
TRIM39-205ENST00000396551 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP12.63□□□□□ -0.399e-7■■■■■ 39.9
TRIM39-205ENST00000396551 PF4V1P10720 104 aa12.62□□□□□ -0.39
TRIM39-205ENST00000396551 USMG5Q96IX5 58 aa12.62□□□□□ -0.39
TRIM39-205ENST00000396551 hDV102S1A0JD36 115 aa12.62□□□□□ -0.39
TRIM39-205ENST00000396551 RPLP1P05386 114 aaKnown RBP12.62□□□□□ -0.39
TRIM39-205ENST00000396551 TSPOP30536 169 aa12.62□□□□□ -0.39
TRIM39-205ENST00000396551 HIST1H1AQ02539 215 aaPredicted RBP12.62□□□□□ -0.39
TRIM39-205ENST00000396551 OR10AG1Q8NH19 301 aa12.62□□□□□ -0.39
TRIM39-205ENST00000396551 H0Y8G0 127 aa12.62□□□□□ -0.39
TRIM39-205ENST00000396551 IGLV1-40P01703 118 aa12.61□□□□□ -0.39
TRIM39-205ENST00000396551 CKS2P33552 79 aa12.61□□□□□ -0.39
TRIM39-205ENST00000396551 FOXE3Q13461 319 aa12.61□□□□□ -0.39
TRIM39-205ENST00000396551 C9orf139Q6ZV77 190 aa12.61□□□□□ -0.39
TRIM39-205ENST00000396551 TP73-AS1Q9UF72 201 aa12.61□□□□□ -0.39
TRIM39-205ENST00000396551 GAS8-AS1O95177 125 aa12.61□□□□□ -0.39
TRIM39-205ENST00000396551 CDKN1BP46527 198 aa12.61□□□□□ -0.39
TRIM39-205ENST00000396551 PRR9Q5T870 116 aa12.61□□□□□ -0.39
TRIM39-205ENST00000396551 OR4X2Q8NGF9 303 aa12.61□□□□□ -0.39
TRIM39-205ENST00000396551 SOCS3O14543 225 aa12.6□□□□□ -0.39
TRIM39-205ENST00000396551 CFHR3Q02985 330 aa12.6□□□□□ -0.39
TRIM39-205ENST00000396551 PMCHL2Q9BQD1 86 aa12.6□□□□□ -0.39
TRIM39-205ENST00000396551 TFPI2P48307 235 aa12.6□□□□□ -0.39
TRIM39-205ENST00000396551 LINC01545Q5VT33 79 aa12.6□□□□□ -0.39
TRIM39-205ENST00000396551 A0A096LNT2 108 aa12.6□□□□□ -0.39
TRIM39-205ENST00000396551 PRSS57Q6UWY2 283 aa12.6□□□□□ -0.39
TRIM39-205ENST00000396551 LAMTOR2Q9Y2Q5 125 aa12.6□□□□□ -0.39
TRIM39-205ENST00000396551 IGHV7-4-1A0A0J9YVY3 117 aa12.59□□□□□ -0.39
TRIM39-205ENST00000396551 FXYD7P58549 80 aa12.59□□□□□ -0.39
TRIM39-205ENST00000396551 DSCR9P59020 149 aa12.59□□□□□ -0.39
TRIM39-205ENST00000396551 ZNF738Q8NE65 137 aa12.59□□□□□ -0.39
TRIM39-205ENST00000396551 DEFB1P60022 68 aa12.59□□□□□ -0.39
TRIM39-205ENST00000396551 BBC3Q96PG8 261 aaPredicted RBP12.58□□□□□ -0.39
TRIM39-205ENST00000396551 NPFFR1Q9GZQ6 430 aa12.58□□□□□ -0.39
TRIM39-205ENST00000396551 MRPS16Q9Y3D3 137 aaKnown RBP12.58□□□□□ -0.39
TRIM39-205ENST00000396551 USP24Q9UPU5 2620 aa12.58□□□□□ -0.4
TRIM39-205ENST00000396551 ST20Q9HBF5 79 aa12.58□□□□□ -0.4
TRIM39-205ENST00000396551 FBN2P35556 2912 aa12.58□□□□□ -0.4
TRIM39-205ENST00000396551 STPG4Q8N801 248 aa12.58□□□□□ -0.4
TRIM39-205ENST00000396551 MYO18BQ8IUG5 2567 aa12.58□□□□□ -0.4
TRIM39-205ENST00000396551 CSPG4Q6UVK1 2322 aa12.57□□□□□ -0.4
TRIM39-205ENST00000396551 IGHV4-59P01825 116 aa12.57□□□□□ -0.4
TRIM39-205ENST00000396551 SLC25A16P16260 332 aa12.57□□□□□ -0.4
TRIM39-205ENST00000396551 GATA3P23771 443 aa12.57□□□□□ -0.4
TRIM39-205ENST00000396551 DEFB112Q30KQ8 113 aa12.57□□□□□ -0.4
TRIM39-205ENST00000396551 GAGE1Q13065 139 aa12.57□□□□□ -0.4
TRIM39-205ENST00000396551 TM4SF20Q53R12 229 aa12.57□□□□□ -0.4
TRIM39-205ENST00000396551 SELENOKQ9Y6D0 94 aa12.56□□□□□ -0.4
TRIM39-205ENST00000396551 EDN2P20800 178 aa12.56□□□□□ -0.4
TRIM39-205ENST00000396551 LINC01356Q8N9X3 169 aa12.56□□□□□ -0.4
TRIM39-205ENST00000396551 MAPK1IP1LQ8NDC0 245 aa12.56□□□□□ -0.4
TRIM39-205ENST00000396551 GATA1P15976 413 aaPredicted RBP12.56□□□□□ -0.4
TRIM39-205ENST00000396551 SRSF1Q07955 248 aaKnown RBP eCLIP12.56□□□□□ -0.4
TRIM39-205ENST00000396551 COL5A1-AS1Q5SY13 56 aa12.55□□□□□ -0.4
TRIM39-205ENST00000396551 ZFAND2AQ8N6M9 145 aa12.55□□□□□ -0.4
TRIM39-205ENST00000396551 OR8A1Q8NGG7 326 aa12.55□□□□□ -0.4
TRIM39-205ENST00000396551 LENEPQ9Y5L5 61 aa12.55□□□□□ -0.4
TRIM39-205ENST00000396551 A0A0G2JLM5 398 aa12.55□□□□□ -0.4
TRIM39-205ENST00000396551 PTTG1IPP53801 180 aa12.55□□□□□ -0.4
TRIM39-205ENST00000396551 RHPN1-AS1Q9BWJ2 59 aa12.55□□□□□ -0.4
TRIM39-205ENST00000396551 J3KRW8 73 aa12.54□□□□□ -0.4
TRIM39-205ENST00000396551 HBDP02042 147 aa12.54□□□□□ -0.4
TRIM39-205ENST00000396551 PPBPP02775 128 aa12.54□□□□□ -0.4
TRIM39-205ENST00000396551 EVI2AP22794 236 aa12.54□□□□□ -0.4
TRIM39-205ENST00000396551 HINT1P49773 126 aaPredicted RBP12.54□□□□□ -0.4
TRIM39-205ENST00000396551 C10orf99Q6UWK7 81 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 76.2 ms