RNA–Protein interactions for RNA: ENST00000395896.8

VPS13C-203, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13C, Length 14,579 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-203ENST00000395896 Q96MF0 132 aa2.66□□□□□ -1.98
VPS13C-203ENST00000395896 PTTG1IPP53801 180 aa2.66□□□□□ -1.98
VPS13C-203ENST00000395896 ZNF56Q15929 161 aa2.66□□□□□ -1.98
VPS13C-203ENST00000395896 SFTA2Q6UW10 78 aa2.66□□□□□ -1.98
VPS13C-203ENST00000395896 ZNF493Q6ZR52 646 aa2.66□□□□□ -1.98
VPS13C-203ENST00000395896 MS4A6AQ9H2W1 248 aa2.66□□□□□ -1.98
VPS13C-203ENST00000395896 IGHV7-4-1A0A0J9YVY3 117 aa2.66□□□□□ -1.98
VPS13C-203ENST00000395896 IGLV2-23P01705 113 aa2.66□□□□□ -1.98
VPS13C-203ENST00000395896 C11orf42Q8N5U0 333 aa2.66□□□□□ -1.98
VPS13C-203ENST00000395896 C20orf78Q9BR46 151 aa2.66□□□□□ -1.98
VPS13C-203ENST00000395896 TRAV8-1A0A0A6YYK1 113 aa2.65□□□□□ -1.98
VPS13C-203ENST00000395896 TRAV2A0A0B4J234 112 aa2.65□□□□□ -1.98
VPS13C-203ENST00000395896 IGHV3-11P01762 117 aa2.65□□□□□ -1.98
VPS13C-203ENST00000395896 CSN3P07498 182 aa2.65□□□□□ -1.98
VPS13C-203ENST00000395896 GP9P14770 177 aa2.65□□□□□ -1.98
VPS13C-203ENST00000395896 FANCD2OSQ96PS1 177 aa2.65□□□□□ -1.98
VPS13C-203ENST00000395896 PAM16Q9Y3D7 125 aa2.65□□□□□ -1.98
VPS13C-203ENST00000395896 IGHV4-30-2A0A087WSY4 118 aa2.65□□□□□ -1.98
VPS13C-203ENST00000395896 ZNF688P0C7X2 276 aa2.65□□□□□ -1.98
VPS13C-203ENST00000395896 PLNP26678 52 aa2.65□□□□□ -1.98
VPS13C-203ENST00000395896 SPXQ9BT56 116 aa2.65□□□□□ -1.98
VPS13C-203ENST00000395896 V9GYV3 84 aa2.65□□□□□ -1.98
VPS13C-203ENST00000395896 A0A087X0K7 114 aa2.65□□□□□ -1.98
VPS13C-203ENST00000395896 BRWD1-AS2P59051 145 aa2.65□□□□□ -1.98
VPS13C-203ENST00000395896 TEX48A0A1B0GUV7 120 aa2.65□□□□□ -1.98
VPS13C-203ENST00000395896 SUMO2P61956 95 aaKnown RBP2.65□□□□□ -1.98
VPS13C-203ENST00000395896 TMSB15BA0A087X1C1 80 aa2.65□□□□□ -1.99
VPS13C-203ENST00000395896 LINC01619G3V211 115 aa2.65□□□□□ -1.99
VPS13C-203ENST00000395896 NDUFS7O75251 213 aa2.65□□□□□ -1.99
VPS13C-203ENST00000395896 ZNF726P1Q15940 193 aa2.65□□□□□ -1.99
VPS13C-203ENST00000395896 ZNF843Q8N446 348 aa2.65□□□□□ -1.99
VPS13C-203ENST00000395896 DERL1Q9BUN8 251 aa2.65□□□□□ -1.99
VPS13C-203ENST00000395896 TCTEX1D4Q5JR98 221 aa2.65□□□□□ -1.99
VPS13C-203ENST00000395896 BOD1L2Q8IYS8 172 aa2.65□□□□□ -1.99
VPS13C-203ENST00000395896 OR9G4Q8NGQ1 327 aa2.65□□□□□ -1.99
VPS13C-203ENST00000395896 GEMIN7Q9H840 131 aaKnown RBP2.65□□□□□ -1.99
VPS13C-203ENST00000395896 MRPS16Q9Y3D3 137 aaKnown RBP2.65□□□□□ -1.99
VPS13C-203ENST00000395896 DUX3Q96PT4 197 aa2.65□□□□□ -1.99
VPS13C-203ENST00000395896 TRAV34A0A0B4J273 112 aa2.65□□□□□ -1.99
VPS13C-203ENST00000395896 LGALS9O00182 355 aa2.65□□□□□ -1.99
VPS13C-203ENST00000395896 MED14OSP0DP75 135 aa2.65□□□□□ -1.99
VPS13C-203ENST00000395896 HOXD3P31249 432 aaPredicted RBP2.65□□□□□ -1.99
VPS13C-203ENST00000395896 PIK3CD-AS1Q5SR53 167 aa2.65□□□□□ -1.99
VPS13C-203ENST00000395896 CHTOPQ9Y3Y2 248 aaKnown RBP2.65□□□□□ -1.99
VPS13C-203ENST00000395896 H3BRM9 83 aa2.65□□□□□ -1.99
VPS13C-203ENST00000395896 SERF1AO75920 110 aa2.65□□□□□ -1.99
VPS13C-203ENST00000395896 COX6CP09669 75 aa2.65□□□□□ -1.99
VPS13C-203ENST00000395896 Q8N6K4 173 aa2.65□□□□□ -1.99
VPS13C-203ENST00000395896 WI2-2373I1.2A0A1W2PRP0 233 aa2.65□□□□□ -1.99
VPS13C-203ENST00000395896 FAM104BQ5XKR9 115 aa2.65□□□□□ -1.99
VPS13C-203ENST00000395896 TPSG1Q9NRR2 321 aa2.65□□□□□ -1.99
VPS13C-203ENST00000395896 G3V318 75 aa2.65□□□□□ -1.99
VPS13C-203ENST00000395896 LAGE3Q14657 143 aa2.65□□□□□ -1.99
VPS13C-203ENST00000395896 FBLN7Q53RD9 439 aa2.65□□□□□ -1.99
VPS13C-203ENST00000395896 C9orf47Q6ZRZ4 202 aa2.65□□□□□ -1.99
VPS13C-203ENST00000395896 CLUHP3Q96NS8 147 aa2.65□□□□□ -1.99
VPS13C-203ENST00000395896 SPENQ96T58 3664 aaKnown RBP2.64□□□□□ -1.99
VPS13C-203ENST00000395896 TRGV2A0A075B6R0 118 aa2.64□□□□□ -1.99
VPS13C-203ENST00000395896 ZFP36P26651 326 aaKnown RBP2.64□□□□□ -1.99
VPS13C-203ENST00000395896 SRSF9Q13242 221 aaKnown RBP eCLIP2.64□□□□□ -1.99
VPS13C-203ENST00000395896 TMEM101Q96IK0 257 aa2.64□□□□□ -1.99
VPS13C-203ENST00000395896 CSMD1Q96PZ7 3565 aa2.64□□□□□ -1.99
VPS13C-203ENST00000395896 EIF3GO75821 320 aaKnown RBP eCLIP2.64□□□□□ -1.99
VPS13C-203ENST00000395896 APOHP02749 345 aaPredicted RBP2.64□□□□□ -1.99
VPS13C-203ENST00000395896 CRYGBP07316 175 aa2.64□□□□□ -1.99
VPS13C-203ENST00000395896 RPL36AP83881 106 aaKnown RBP2.64□□□□□ -1.99
VPS13C-203ENST00000395896 DIAPH2-AS1Q14236 149 aa2.64□□□□□ -1.99
VPS13C-203ENST00000395896 RPL36ALQ969Q0 106 aaKnown RBP2.64□□□□□ -1.99
VPS13C-203ENST00000395896 CBY1Q9Y3M2 126 aa2.64□□□□□ -1.99
VPS13C-203ENST00000395896 FAM181BA6NEQ2 426 aa2.64□□□□□ -1.99
VPS13C-203ENST00000395896 AMN1Q8IY45 258 aa2.64□□□□□ -1.99
VPS13C-203ENST00000395896 CGB1A6NKQ9 187 aa2.64□□□□□ -1.99
VPS13C-203ENST00000395896 WISP2O76076 250 aa2.64□□□□□ -1.99
VPS13C-203ENST00000395896 SNRPCP09234 159 aaKnown RBP2.64□□□□□ -1.99
VPS13C-203ENST00000395896 HTN1P15515 57 aa2.64□□□□□ -1.99
VPS13C-203ENST00000395896 ZNF876PQ49A33 203 aa2.64□□□□□ -1.99
VPS13C-203ENST00000395896 LOC102724200A0A096LPH7 203 aaPredicted RBP2.64□□□□□ -1.99
VPS13C-203ENST00000395896 IFITM10A6NMD0 228 aa2.64□□□□□ -1.99
VPS13C-203ENST00000395896 UBE2L6O14933 153 aa2.64□□□□□ -1.99
VPS13C-203ENST00000395896 CRIP2P52943 208 aaPredicted RBP2.64□□□□□ -1.99
VPS13C-203ENST00000395896 APOC4P55056 127 aa2.64□□□□□ -1.99
VPS13C-203ENST00000395896 AMMECR1LQ6DCA0 310 aa2.64□□□□□ -1.99
VPS13C-203ENST00000395896 LCNL1Q6ZST4 164 aa2.64□□□□□ -1.99
VPS13C-203ENST00000395896 SH2D6Q7Z4S9 175 aa2.64□□□□□ -1.99
VPS13C-203ENST00000395896 HIST3H2BBQ8N257 126 aa2.64□□□□□ -1.99
VPS13C-203ENST00000395896 IGHV3OR16-13A0A075B7E8 117 aa2.64□□□□□ -1.99
VPS13C-203ENST00000395896 IGHV3-74A0A0B4J1X5 117 aa2.64□□□□□ -1.99
VPS13C-203ENST00000395896 MGPP08493 103 aa2.64□□□□□ -1.99
VPS13C-203ENST00000395896 C5orf24Q7Z6I8 188 aa2.64□□□□□ -1.99
VPS13C-203ENST00000395896 OR1N2Q8NGR9 330 aa2.64□□□□□ -1.99
VPS13C-203ENST00000395896 TRAV5A0A0B4J249 113 aa2.64□□□□□ -1.99
VPS13C-203ENST00000395896 GRIFINA4D1Z8 144 aa2.64□□□□□ -1.99
VPS13C-203ENST00000395896 PGPEP1LA6NFU8 196 aa2.64□□□□□ -1.99
VPS13C-203ENST00000395896 VWC2LB2RUY7 222 aa2.64□□□□□ -1.99
VPS13C-203ENST00000395896 SYNJ2BPP57105 145 aa2.64□□□□□ -1.99
VPS13C-203ENST00000395896 DEFB112Q30KQ8 113 aa2.64□□□□□ -1.99
VPS13C-203ENST00000395896 WFDC3Q8IUB2 231 aa2.64□□□□□ -1.99
VPS13C-203ENST00000395896 PSMG3-AS1Q96PY0 264 aa2.64□□□□□ -1.99
VPS13C-203ENST00000395896 IGHV3OR16-10A0A075B7F0 116 aa2.64□□□□□ -1.99
VPS13C-203ENST00000395896 TRAV9-2A0A087WT02 112 aa2.64□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 87.1 ms