RNA–Protein interactions for RNA: ENST00000395761.3

CXCL1-201, Transcript of C-X-C motif chemokine ligand 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CXCL1, Length 1,097 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL1-201ENST00000395761 K7EQM0 130 aa11.9□□□□□ -0.5
CXCL1-201ENST00000395761 LEPP41159 167 aa11.9□□□□□ -0.5
CXCL1-201ENST00000395761 GFI1BQ5VTD9 330 aa11.9□□□□□ -0.5
CXCL1-201ENST00000395761 GOLT1AQ6ZVE7 132 aa11.9□□□□□ -0.5
CXCL1-201ENST00000395761 LINC01587Q99440 93 aa11.9□□□□□ -0.5
CXCL1-201ENST00000395761 RPH3ALQ9UNE2 315 aa11.9□□□□□ -0.5
CXCL1-201ENST00000395761 SCO2A0A1W2PP80 73 aa11.89□□□□□ -0.51
CXCL1-201ENST00000395761 S100A9P06702 114 aaKnown RBP11.89□□□□□ -0.51
CXCL1-201ENST00000395761 EMP1P54849 157 aa11.89□□□□□ -0.51
CXCL1-201ENST00000395761 TMEM78Q5T7P6 136 aa11.89□□□□□ -0.51
CXCL1-201ENST00000395761 EIF4E3Q8N5X7 224 aaKnown RBP11.89□□□□□ -0.51
CXCL1-201ENST00000395761 TMEM75Q8N9X5 138 aa11.89□□□□□ -0.51
CXCL1-201ENST00000395761 Q8TAT8 98 aa11.89□□□□□ -0.51
CXCL1-201ENST00000395761 C11orf45Q8TAV5 145 aa11.89□□□□□ -0.51
CXCL1-201ENST00000395761 C2CD4CQ8TF44 421 aa11.89□□□□□ -0.51
CXCL1-201ENST00000395761 ZNF492Q9P255 531 aa11.89□□□□□ -0.51
CXCL1-201ENST00000395761 CELA1Q9UNI1 258 aa11.89□□□□□ -0.51
CXCL1-201ENST00000395761 STARD9Q9P2P6 4700 aa11.88□□□□□ -0.51
CXCL1-201ENST00000395761 TRBV6-1A0A0K0K1D8 114 aa11.88□□□□□ -0.51
CXCL1-201ENST00000395761 IGLV2-11P01706 119 aa11.88□□□□□ -0.51
CXCL1-201ENST00000395761 SRP19P09132 144 aaKnown RBP11.88□□□□□ -0.51
CXCL1-201ENST00000395761 AZU1P20160 251 aa11.88□□□□□ -0.51
CXCL1-201ENST00000395761 SRSF3P84103 164 aaKnown RBP11.88□□□□□ -0.51
CXCL1-201ENST00000395761 RRN3P1Q2M238 152 aa11.88□□□□□ -0.51
CXCL1-201ENST00000395761 UQCC3Q6UW78 93 aa11.88□□□□□ -0.51
CXCL1-201ENST00000395761 LENEPQ9Y5L5 61 aa11.88□□□□□ -0.51
CXCL1-201ENST00000395761 TRAV12-3A0A0B4J271 114 aa11.87□□□□□ -0.51
CXCL1-201ENST00000395761 TRBV7-9A0A0J9YWB2 115 aa11.87□□□□□ -0.51
CXCL1-201ENST00000395761 CXorf65A6NEN9 183 aa11.87□□□□□ -0.51
CXCL1-201ENST00000395761 KLLNB2CW77 178 aa11.87□□□□□ -0.51
CXCL1-201ENST00000395761 HTN1P15515 57 aa11.87□□□□□ -0.51
CXCL1-201ENST00000395761 CRISP2P16562 243 aa11.87□□□□□ -0.51
CXCL1-201ENST00000395761 ZNF138P52744 262 aa11.87□□□□□ -0.51
CXCL1-201ENST00000395761 TAS2R60P59551 318 aa11.87□□□□□ -0.51
CXCL1-201ENST00000395761 TMEM183BQ1AE95 376 aa11.87□□□□□ -0.51
CXCL1-201ENST00000395761 PRR9Q5T870 116 aa11.87□□□□□ -0.51
CXCL1-201ENST00000395761 LCE2DQ5TA82 110 aaPredicted RBP11.87□□□□□ -0.51
CXCL1-201ENST00000395761 ZFAND2AQ8N6M9 145 aa11.87□□□□□ -0.51
CXCL1-201ENST00000395761 FMC1Q96HJ9 113 aa11.87□□□□□ -0.51
CXCL1-201ENST00000395761 LINC00479Q96M42 142 aa11.87□□□□□ -0.51
CXCL1-201ENST00000395761 C9JQL5 133 aa11.86□□□□□ -0.51
CXCL1-201ENST00000395761 RNASE4P34096 147 aaKnown RBP11.86□□□□□ -0.51
CXCL1-201ENST00000395761 AKR1C3P42330 323 aa11.86□□□□□ -0.51
CXCL1-201ENST00000395761 BTN1A1Q13410 526 aa11.86□□□□□ -0.51
CXCL1-201ENST00000395761 Q6ZQT7 251 aa11.86□□□□□ -0.51
CXCL1-201ENST00000395761 TMEM256Q8N2U0 113 aa11.86□□□□□ -0.51
CXCL1-201ENST00000395761 C20orf144Q9BQM9 153 aa11.86□□□□□ -0.51
CXCL1-201ENST00000395761 PSG8Q9UQ74 426 aa11.86□□□□□ -0.51
CXCL1-201ENST00000395761 TRAV8-1A0A0A6YYK1 113 aa11.85□□□□□ -0.51
CXCL1-201ENST00000395761 TRAV34A0A0B4J273 112 aa11.85□□□□□ -0.51
CXCL1-201ENST00000395761 C7orf71A4D174 169 aa11.85□□□□□ -0.51
CXCL1-201ENST00000395761 TMEM189A5PLL7 270 aa11.85□□□□□ -0.51
CXCL1-201ENST00000395761 H7BYZ3 331 aa11.85□□□□□ -0.51
CXCL1-201ENST00000395761 GPX1P07203 203 aa11.85□□□□□ -0.51
CXCL1-201ENST00000395761 FLI1Q01543 452 aaPredicted RBP11.85□□□□□ -0.51
CXCL1-201ENST00000395761 COMMD7Q86VX2 200 aa11.85□□□□□ -0.51
CXCL1-201ENST00000395761 SGK494Q96LW2 274 aa11.85□□□□□ -0.51
CXCL1-201ENST00000395761 TENM2Q9NT68 2774 aa11.84□□□□□ -0.51
CXCL1-201ENST00000395761 ZNF324O75467 553 aaPredicted RBP11.84□□□□□ -0.51
CXCL1-201ENST00000395761 UBE2G1P62253 170 aa11.84□□□□□ -0.51
CXCL1-201ENST00000395761 C12orf74Q32Q52 190 aa11.84□□□□□ -0.51
CXCL1-201ENST00000395761 PHLDA1Q8WV24 401 aaPredicted RBP11.84□□□□□ -0.51
CXCL1-201ENST00000395761 NIPSNAP3BQ9BS92 247 aa11.84□□□□□ -0.51
CXCL1-201ENST00000395761 TREM1Q9NP99 234 aa11.84□□□□□ -0.51
CXCL1-201ENST00000395761 ZFP30Q9Y2G7 519 aa11.84□□□□□ -0.51
CXCL1-201ENST00000395761 PLAC8L1A1L4L8 177 aa11.83□□□□□ -0.52
CXCL1-201ENST00000395761 RPL35P42766 123 aaKnown RBP11.83□□□□□ -0.52
CXCL1-201ENST00000395761 SAPCD1Q5SSQ6 148 aa11.83□□□□□ -0.52
CXCL1-201ENST00000395761 FAM222AQ5U5X8 452 aa11.83□□□□□ -0.52
CXCL1-201ENST00000395761 CEMP1Q6PRD7 247 aaPredicted RBP11.83□□□□□ -0.52
CXCL1-201ENST00000395761 COX8CQ7Z4L0 72 aa11.83□□□□□ -0.52
CXCL1-201ENST00000395761 TVP23CQ96ET8 276 aa11.83□□□□□ -0.52
CXCL1-201ENST00000395761 DERL1Q9BUN8 251 aa11.83□□□□□ -0.52
CXCL1-201ENST00000395761 PARLQ9H300 379 aa11.83□□□□□ -0.52
CXCL1-201ENST00000395761 DKK2Q9UBU2 259 aa11.83□□□□□ -0.52
CXCL1-201ENST00000395761 LTAP01374 205 aa11.82□□□□□ -0.52
CXCL1-201ENST00000395761 SPART-AS1P0CW21 52 aa11.82□□□□□ -0.52
CXCL1-201ENST00000395761 NDUFA5Q16718 116 aa11.82□□□□□ -0.52
CXCL1-201ENST00000395761 FAM74A3Q4VXF1 159 aa11.82□□□□□ -0.52
CXCL1-201ENST00000395761 Q6ZTC4 211 aa11.82□□□□□ -0.52
CXCL1-201ENST00000395761 PRNTQ86SH4 94 aa11.82□□□□□ -0.52
CXCL1-201ENST00000395761 Q86TA4 180 aa11.81□□□□□ -0.52
CXCL1-201ENST00000395761 BAGE2Q86Y30 109 aa11.81□□□□□ -0.52
CXCL1-201ENST00000395761 SMIM12Q96EX1 92 aa11.81□□□□□ -0.52
CXCL1-201ENST00000395761 NDFIP1Q9BT67 221 aa11.81□□□□□ -0.52
CXCL1-201ENST00000395761 MLST8Q9BVC4 326 aa11.81□□□□□ -0.52
CXCL1-201ENST00000395761 DYNC2H1Q8NCM8 4307 aaKnown RBP11.81□□□□□ -0.52
CXCL1-201ENST00000395761 NUPR2A6NF83 97 aa11.8□□□□□ -0.52
CXCL1-201ENST00000395761 C9JCJ5 164 aa11.8□□□□□ -0.52
CXCL1-201ENST00000395761 TMEM183AQ8IXX5 376 aa11.8□□□□□ -0.52
CXCL1-201ENST00000395761 RNASE8Q8TDE3 154 aaKnown RBP11.8□□□□□ -0.52
CXCL1-201ENST00000395761 C16orf74Q96GX8 76 aa11.8□□□□□ -0.52
CXCL1-201ENST00000395761 PYGO2Q9BRQ0 406 aa11.8□□□□□ -0.52
CXCL1-201ENST00000395761 TRBV20OR9-2A0A075B6H5 130 aa11.79□□□□□ -0.52
CXCL1-201ENST00000395761 TMEM218A2RU14 115 aa11.79□□□□□ -0.52
CXCL1-201ENST00000395761 SOHLH1Q5JUK2 328 aa11.79□□□□□ -0.52
CXCL1-201ENST00000395761 ZNF493Q6ZR52 646 aa11.79□□□□□ -0.52
CXCL1-201ENST00000395761 TMEM263Q8WUH6 116 aaKnown RBP11.79□□□□□ -0.52
CXCL1-201ENST00000395761 LY96Q9Y6Y9 160 aa11.79□□□□□ -0.52
CXCL1-201ENST00000395761 KMT2CQ8NEZ4 4911 aaKnown RBP11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 88.7 ms