RNA–Protein interactions for RNA: ENST00000395246.5

CDC42SE2-202, Transcript of CDC42 small effector 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CDC42SE2, Length 3,485 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-202ENST00000395246 SNRPCP09234 159 aaKnown RBP10.59□□□□□ -0.71
CDC42SE2-202ENST00000395246 ARMS2P0C7Q2 107 aa10.59□□□□□ -0.71
CDC42SE2-202ENST00000395246 PMCHP20382 165 aa10.59□□□□□ -0.71
CDC42SE2-202ENST00000395246 PROK1P58294 105 aa10.59□□□□□ -0.71
CDC42SE2-202ENST00000395246 FOXI2Q6ZQN5 318 aa10.59□□□□□ -0.71
CDC42SE2-202ENST00000395246 SGK494Q96LW2 274 aa10.59□□□□□ -0.71
CDC42SE2-202ENST00000395246 PEMTQ9UBM1 199 aa10.59□□□□□ -0.71
CDC42SE2-202ENST00000395246 OR9G4Q8NGQ1 327 aa10.58□□□□□ -0.72
CDC42SE2-202ENST00000395246 RPL32P62910 135 aaKnown RBP10.58□□□□□ -0.72
CDC42SE2-202ENST00000395246 KIR3DS1Q14943 382 aa10.58□□□□□ -0.72
CDC42SE2-202ENST00000395246 PRR27Q6MZM9 219 aa10.58□□□□□ -0.72
CDC42SE2-202ENST00000395246 NDUFAF3Q9BU61 184 aa10.58□□□□□ -0.72
CDC42SE2-202ENST00000395246 LYZL1Q6UWQ5 148 aa10.57□□□□□ -0.72
CDC42SE2-202ENST00000395246 LCNL1Q6ZST4 164 aa10.57□□□□□ -0.72
CDC42SE2-202ENST00000395246 SPAG8Q99932 426 aaPredicted RBP10.57□□□□□ -0.72
CDC42SE2-202ENST00000395246 ITPR3Q14573 2671 aa10.57□□□□□ -0.72
CDC42SE2-202ENST00000395246 NBASA2RRP1 2371 aa10.57□□□□□ -0.72
CDC42SE2-202ENST00000395246 SERF1AO75920 110 aa10.57□□□□□ -0.72
CDC42SE2-202ENST00000395246 EDN2P20800 178 aa10.57□□□□□ -0.72
CDC42SE2-202ENST00000395246 MRPL54Q6P161 138 aaKnown RBP10.57□□□□□ -0.72
CDC42SE2-202ENST00000395246 FER1L6-AS1Q8NA97 138 aa10.57□□□□□ -0.72
CDC42SE2-202ENST00000395246 OR10J6PQ8NGY7 276 aa10.57□□□□□ -0.72
CDC42SE2-202ENST00000395246 LINC01006Q8NI28 216 aa10.57□□□□□ -0.72
CDC42SE2-202ENST00000395246 PGLYRP4Q96LB8 373 aa10.57□□□□□ -0.72
CDC42SE2-202ENST00000395246 TRAV21A0A0B4J279 112 aa10.57□□□□□ -0.72
CDC42SE2-202ENST00000395246 PPBPP02775 128 aa10.57□□□□□ -0.72
CDC42SE2-202ENST00000395246 NIT1Q86X76 327 aa10.57□□□□□ -0.72
CDC42SE2-202ENST00000395246 Q8TAT8 98 aa10.57□□□□□ -0.72
CDC42SE2-202ENST00000395246 JMJD8Q96S16 334 aa10.57□□□□□ -0.72
CDC42SE2-202ENST00000395246 C20orf144Q9BQM9 153 aa10.57□□□□□ -0.72
CDC42SE2-202ENST00000395246 RPH3ALQ9UNE2 315 aa10.57□□□□□ -0.72
CDC42SE2-202ENST00000395246 ZNF256Q9Y2P7 627 aaPredicted RBP10.57□□□□□ -0.72
CDC42SE2-202ENST00000395246 IGHV3-35A0A0C4DH35 117 aa10.56□□□□□ -0.72
CDC42SE2-202ENST00000395246 TCL1AP56279 114 aa10.56□□□□□ -0.72
CDC42SE2-202ENST00000395246 S100A2P29034 98 aa10.56□□□□□ -0.72
CDC42SE2-202ENST00000395246 LEPP41159 167 aa10.56□□□□□ -0.72
CDC42SE2-202ENST00000395246 IGFL4Q6B9Z1 124 aa10.56□□□□□ -0.72
CDC42SE2-202ENST00000395246 TEX43Q6ZNM6 134 aa10.56□□□□□ -0.72
CDC42SE2-202ENST00000395246 SPATA12Q7Z6I5 190 aa10.56□□□□□ -0.72
CDC42SE2-202ENST00000395246 OR1N2Q8NGR9 330 aa10.56□□□□□ -0.72
CDC42SE2-202ENST00000395246 C9orf85Q96MD7 179 aa10.56□□□□□ -0.72
CDC42SE2-202ENST00000395246 RCHY1Q96PM5 261 aa10.56□□□□□ -0.72
CDC42SE2-202ENST00000395246 FAM181BA6NEQ2 426 aa10.55□□□□□ -0.72
CDC42SE2-202ENST00000395246 SRIP30626 198 aa10.55□□□□□ -0.72
CDC42SE2-202ENST00000395246 TSSC4Q9Y5U2 329 aaPredicted RBP10.55□□□□□ -0.72
CDC42SE2-202ENST00000395246 IGLV2-18A0A075B6J9 118 aa10.54□□□□□ -0.72
CDC42SE2-202ENST00000395246 ZNF207O43670 478 aaKnown RBP10.54□□□□□ -0.72
CDC42SE2-202ENST00000395246 DUSP14O95147 198 aaKnown RBP10.54□□□□□ -0.72
CDC42SE2-202ENST00000395246 Q6ZWC4 215 aa10.54□□□□□ -0.72
CDC42SE2-202ENST00000395246 RAX2Q96IS3 184 aa10.54□□□□□ -0.72
CDC42SE2-202ENST00000395246 KIF25-AS1Q9Y6Z4 181 aa10.54□□□□□ -0.72
CDC42SE2-202ENST00000395246 IGHV3OR16-8A0A075B7F1 116 aa10.54□□□□□ -0.72
CDC42SE2-202ENST00000395246 IGHV3-66A0A0C4DH42 116 aa10.54□□□□□ -0.72
CDC42SE2-202ENST00000395246 AKAP6Q13023 2319 aa10.54□□□□□ -0.72
CDC42SE2-202ENST00000395246 ZANQ9Y493 2812 aa10.54□□□□□ -0.72
CDC42SE2-202ENST00000395246 M0R381 172 aa10.54□□□□□ -0.72
CDC42SE2-202ENST00000395246 DEFB114Q30KQ6 69 aa10.54□□□□□ -0.72
CDC42SE2-202ENST00000395246 K7EMI3 77 aa10.53□□□□□ -0.72
CDC42SE2-202ENST00000395246 HLA-DRB4P13762 266 aa10.53□□□□□ -0.72
CDC42SE2-202ENST00000395246 FABP4P15090 132 aa10.53□□□□□ -0.72
CDC42SE2-202ENST00000395246 OR10D4PQ8NGN7 298 aa10.53□□□□□ -0.72
CDC42SE2-202ENST00000395246 HLA-DRB4X5D2U9 266 aa10.53□□□□□ -0.72
CDC42SE2-202ENST00000395246 ZNF738Q8NE65 137 aa10.53□□□□□ -0.72
CDC42SE2-202ENST00000395246 TPRP12270 2363 aaKnown RBP10.53□□□□□ -0.72
CDC42SE2-202ENST00000395246 TEX15Q9BXT5 2789 aa10.53□□□□□ -0.72
CDC42SE2-202ENST00000395246 EPG5Q9HCE0 2579 aa10.52□□□□□ -0.72
CDC42SE2-202ENST00000395246 A0A1B0GUS0 222 aa10.52□□□□□ -0.72
CDC42SE2-202ENST00000395246 RNASE3P12724 160 aaKnown RBP10.52□□□□□ -0.72
CDC42SE2-202ENST00000395246 C18orf65Q6ZTR6 163 aa10.52□□□□□ -0.72
CDC42SE2-202ENST00000395246 IL17DQ8TAD2 202 aa10.52□□□□□ -0.72
CDC42SE2-202ENST00000395246 CENPEQ02224 2701 aa10.52□□□□□ -0.73
CDC42SE2-202ENST00000395246 OTOGQ6ZRI0 2925 aa10.52□□□□□ -0.73
CDC42SE2-202ENST00000395246 KIR2DL5BA0A0G2JN68 375 aa10.52□□□□□ -0.73
CDC42SE2-202ENST00000395246 KIR2DL5BA0A0G2JPC4 375 aa10.52□□□□□ -0.73
CDC42SE2-202ENST00000395246 KIR2DL5AQ8N109 375 aa10.52□□□□□ -0.73
CDC42SE2-202ENST00000395246 GRIFINA4D1Z8 144 aa10.52□□□□□ -0.73
CDC42SE2-202ENST00000395246 LY6G6DO95868 133 aa10.52□□□□□ -0.73
CDC42SE2-202ENST00000395246 SNRPD3P62318 126 aaKnown RBP10.52□□□□□ -0.73
CDC42SE2-202ENST00000395246 SYNJ2BPP57105 145 aa10.51□□□□□ -0.73
CDC42SE2-202ENST00000395246 LINC00315P59091 139 aa10.51□□□□□ -0.73
CDC42SE2-202ENST00000395246 WIPF1O43516 503 aa10.51□□□□□ -0.73
CDC42SE2-202ENST00000395246 MRPL51Q4U2R6 128 aaKnown RBP10.51□□□□□ -0.73
CDC42SE2-202ENST00000395246 MRAP2Q96G30 205 aa10.51□□□□□ -0.73
CDC42SE2-202ENST00000395246 NDUFA11Q86Y39 141 aa10.5□□□□□ -0.73
CDC42SE2-202ENST00000395246 OR11H1Q8NG94 326 aa10.5□□□□□ -0.73
CDC42SE2-202ENST00000395246 DLX4Q92988 240 aaPredicted RBP10.5□□□□□ -0.73
CDC42SE2-202ENST00000395246 YAE1D1Q9NRH1 226 aa10.5□□□□□ -0.73
CDC42SE2-202ENST00000395246 CMC4P56277 68 aaPredicted RBP10.5□□□□□ -0.73
CDC42SE2-202ENST00000395246 PDZD11Q5EBL8 140 aa10.5□□□□□ -0.73
CDC42SE2-202ENST00000395246 NRACQ8N912 160 aa10.5□□□□□ -0.73
CDC42SE2-202ENST00000395246 BORCS7Q96B45 105 aa10.5□□□□□ -0.73
CDC42SE2-202ENST00000395246 LRRK2Q5S007 2527 aa10.5□□□□□ -0.73
CDC42SE2-202ENST00000395246 ZFYVE26Q68DK2 2539 aa10.5□□□□□ -0.73
CDC42SE2-202ENST00000395246 A0A096LNJ9 63 aa10.5□□□□□ -0.73
CDC42SE2-202ENST00000395246 NTF3P20783 257 aa10.5□□□□□ -0.73
CDC42SE2-202ENST00000395246 BEAN1Q3B7T3 259 aa10.5□□□□□ -0.73
CDC42SE2-202ENST00000395246 MRPL52Q86TS9 123 aaKnown RBP10.5□□□□□ -0.73
CDC42SE2-202ENST00000395246 ZNF418Q8TF45 676 aaPredicted RBP10.5□□□□□ -0.73
CDC42SE2-202ENST00000395246 DNAH3Q8TD57 4116 aa10.49□□□□□ -0.73
CDC42SE2-202ENST00000395246 SLURP1P55000 103 aa10.49□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms