RNA–Protein interactions for RNA: ENST00000394991.7

SNCA-205, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNCA, Length 1,290 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-205ENST00000394991 LRCOL1A6NCL2 159 aa10.64□□□□□ -0.71
SNCA-205ENST00000394991 MPC2O95563 127 aa10.64□□□□□ -0.71
SNCA-205ENST00000394991 RPL29P47914 159 aaKnown RBP10.64□□□□□ -0.71
SNCA-205ENST00000394991 CD300CQ08708 224 aa10.64□□□□□ -0.71
SNCA-205ENST00000394991 BTN1A1Q13410 526 aa10.64□□□□□ -0.71
SNCA-205ENST00000394991 OPCMLQ14982 345 aa10.64□□□□□ -0.71
SNCA-205ENST00000394991 MRPL23Q16540 153 aaKnown RBP10.64□□□□□ -0.71
SNCA-205ENST00000394991 ANXA2RQ3ZCQ2 193 aa10.64□□□□□ -0.71
SNCA-205ENST00000394991 THAP6Q8TBB0 222 aa10.64□□□□□ -0.71
SNCA-205ENST00000394991 C8orf49Q96NF6 230 aa10.64□□□□□ -0.71
SNCA-205ENST00000394991 MRPL16Q9NX20 251 aaKnown RBP10.64□□□□□ -0.71
SNCA-205ENST00000394991 TRAV5A0A0B4J249 113 aa10.63□□□□□ -0.71
SNCA-205ENST00000394991 SLC25A5P05141 298 aaKnown RBP10.63□□□□□ -0.71
SNCA-205ENST00000394991 PET100P0DJ07 73 aa10.63□□□□□ -0.71
SNCA-205ENST00000394991 FHL2Q14192 279 aa10.63□□□□□ -0.71
SNCA-205ENST00000394991 NEGR1Q7Z3B1 354 aa10.63□□□□□ -0.71
SNCA-205ENST00000394991 EIF4E3Q8N5X7 224 aaKnown RBP10.63□□□□□ -0.71
SNCA-205ENST00000394991 PFDN5Q99471 154 aa10.63□□□□□ -0.71
SNCA-205ENST00000394991 NPCDR1Q9BY65 106 aa10.63□□□□□ -0.71
SNCA-205ENST00000394991 TP53TG3Q9ULZ0 132 aa10.63□□□□□ -0.71
SNCA-205ENST00000394991 UBR4Q5T4S7 5183 aa10.62□□□□□ -0.71
SNCA-205ENST00000394991 KLLNB2CW77 178 aa10.62□□□□□ -0.71
SNCA-205ENST00000394991 MPDU1O75352 247 aa10.62□□□□□ -0.71
SNCA-205ENST00000394991 ERCC8Q13216 396 aa10.62□□□□□ -0.71
SNCA-205ENST00000394991 FAM19A4Q96LR4 140 aa10.62□□□□□ -0.71
SNCA-205ENST00000394991 VGLL1Q99990 258 aa10.62□□□□□ -0.71
SNCA-205ENST00000394991 MBD2Q9UBB5 411 aa10.62□□□□□ -0.71
SNCA-205ENST00000394991 HHLA3Q9XRX5 114 aa10.62□□□□□ -0.71
SNCA-205ENST00000394991 K7EP13 123 aa10.61□□□□□ -0.71
SNCA-205ENST00000394991 EVI2AP22794 236 aa10.61□□□□□ -0.71
SNCA-205ENST00000394991 IBA57Q5T440 356 aaKnown RBP10.61□□□□□ -0.71
SNCA-205ENST00000394991 Q6ZQT7 251 aa10.61□□□□□ -0.71
SNCA-205ENST00000394991 NTN5Q8WTR8 489 aaPredicted RBP10.61□□□□□ -0.71
SNCA-205ENST00000394991 CHAC2Q8WUX2 184 aa10.61□□□□□ -0.71
SNCA-205ENST00000394991 SMIM3Q9BZL3 60 aa10.61□□□□□ -0.71
SNCA-205ENST00000394991 MED28Q9H204 178 aa10.61□□□□□ -0.71
SNCA-205ENST00000394991 K7EQD1 137 aa10.6□□□□□ -0.71
SNCA-205ENST00000394991 M0R3E3 92 aa10.6□□□□□ -0.71
SNCA-205ENST00000394991 CRYGDP07320 174 aa10.6□□□□□ -0.71
SNCA-205ENST00000394991 RPL12P30050 165 aaKnown RBP10.6□□□□□ -0.71
SNCA-205ENST00000394991 SLAQ13239 276 aa10.6□□□□□ -0.71
SNCA-205ENST00000394991 GCSAMLQ5JQS6 135 aa10.6□□□□□ -0.71
SNCA-205ENST00000394991 WDR61Q9GZS3 305 aaKnown RBP10.6□□□□□ -0.71
SNCA-205ENST00000394991 HSPB11Q9Y547 144 aa10.6□□□□□ -0.71
SNCA-205ENST00000394991 SRIP30626 198 aa10.59□□□□□ -0.71
SNCA-205ENST00000394991 RNASE4P34096 147 aaKnown RBP10.59□□□□□ -0.71
SNCA-205ENST00000394991 PRR9Q5T870 116 aa10.59□□□□□ -0.71
SNCA-205ENST00000394991 ATP5SQ99766 215 aa10.59□□□□□ -0.71
SNCA-205ENST00000394991 MRPL32Q9BYC8 188 aaKnown RBP10.59□□□□□ -0.71
SNCA-205ENST00000394991 C17orf112F2Z3M2 114 aa10.58□□□□□ -0.72
SNCA-205ENST00000394991 PLA2G1BP04054 148 aaKnown RBP10.58□□□□□ -0.72
SNCA-205ENST00000394991 GUK1Q16774 197 aa10.58□□□□□ -0.72
SNCA-205ENST00000394991 SERTAD4-AS1Q5TG53 156 aa10.58□□□□□ -0.72
SNCA-205ENST00000394991 LINC00528Q8N1L1 170 aa10.58□□□□□ -0.72
SNCA-205ENST00000394991 Q8N814 137 aa10.58□□□□□ -0.72
SNCA-205ENST00000394991 MRPL53Q96EL3 112 aaKnown RBP10.58□□□□□ -0.72
SNCA-205ENST00000394991 AGPAT4-IT1Q9H0P7 198 aa10.58□□□□□ -0.72
SNCA-205ENST00000394991 KCNIP2Q9NS61 270 aa10.58□□□□□ -0.72
SNCA-205ENST00000394991 PSCAO43653 123 aa10.57□□□□□ -0.72
SNCA-205ENST00000394991 SFTA3P0C7M3 94 aa10.57□□□□□ -0.72
SNCA-205ENST00000394991 CRISP2P16562 243 aa10.57□□□□□ -0.72
SNCA-205ENST00000394991 RGS21Q2M5E4 152 aa10.57□□□□□ -0.72
SNCA-205ENST00000394991 C10orf126Q8N4M7 172 aa10.57□□□□□ -0.72
SNCA-205ENST00000394991 ZFAND2AQ8N6M9 145 aa10.57□□□□□ -0.72
SNCA-205ENST00000394991 SCGB1C1Q8TD33 95 aa10.57□□□□□ -0.72
SNCA-205ENST00000394991 DEFB104AQ8WTQ1 72 aa10.57□□□□□ -0.72
SNCA-205ENST00000394991 FAT3Q8TDW7 4589 aa10.56□□□□□ -0.72
SNCA-205ENST00000394991 IGHV1OR15-1A0A075B7D0 117 aa10.56□□□□□ -0.72
SNCA-205ENST00000394991 TRGV4A0A0C4DH28 118 aa10.56□□□□□ -0.72
SNCA-205ENST00000394991 RGS13O14921 159 aa10.56□□□□□ -0.72
SNCA-205ENST00000394991 ZNF253O75346 499 aa10.56□□□□□ -0.72
SNCA-205ENST00000394991 C1QBP02746 253 aa10.56□□□□□ -0.72
SNCA-205ENST00000394991 GYPEP15421 78 aa10.56□□□□□ -0.72
SNCA-205ENST00000394991 Q6ZSA8 131 aa10.56□□□□□ -0.72
SNCA-205ENST00000394991 MIR17HGQ75NE6 70 aa10.56□□□□□ -0.72
SNCA-205ENST00000394991 SYT8Q8NBV8 401 aa10.56□□□□□ -0.72
SNCA-205ENST00000394991 ZNF479Q96JC4 524 aa10.56□□□□□ -0.72
SNCA-205ENST00000394991 LINC00477Q96M19 166 aa10.56□□□□□ -0.72
SNCA-205ENST00000394991 NDUFB4O95168 129 aa10.55□□□□□ -0.72
SNCA-205ENST00000394991 GPX1P07203 203 aa10.55□□□□□ -0.72
SNCA-205ENST00000394991 PYYP10082 97 aa10.55□□□□□ -0.72
SNCA-205ENST00000394991 ZNF415Q09FC8 603 aa10.55□□□□□ -0.72
SNCA-205ENST00000394991 BLNKQ8WV28 456 aa10.55□□□□□ -0.72
SNCA-205ENST00000394991 ARPC5LQ9BPX5 153 aa10.55□□□□□ -0.72
SNCA-205ENST00000394991 WFDC1Q9HC57 220 aa10.55□□□□□ -0.72
SNCA-205ENST00000394991 TMEM14CQ9P0S9 112 aa10.55□□□□□ -0.72
SNCA-205ENST00000394991 TIMM9Q9Y5J7 89 aa10.55□□□□□ -0.72
SNCA-205ENST00000394991 TRBV19A0A075B6N1 114 aa10.54□□□□□ -0.72
SNCA-205ENST00000394991 HIST1H1EP10412 219 aaKnown RBP10.54□□□□□ -0.72
SNCA-205ENST00000394991 FFAR4Q5NUL3 377 aa10.54□□□□□ -0.72
SNCA-205ENST00000394991 IQCF2Q8IXL9 164 aa10.54□□□□□ -0.72
SNCA-205ENST00000394991 PCNPQ8WW12 178 aaKnown RBP10.54□□□□□ -0.72
SNCA-205ENST00000394991 SLC25A2Q9BXI2 301 aa10.54□□□□□ -0.72
SNCA-205ENST00000394991 IGKV2-40A0A087WW87 121 aaPredicted RBP10.53□□□□□ -0.72
SNCA-205ENST00000394991 IGKV2D-40P01614 121 aaPredicted RBP10.53□□□□□ -0.72
SNCA-205ENST00000394991 WFDC2Q14508 124 aa10.53□□□□□ -0.72
SNCA-205ENST00000394991 C9orf47Q6ZRZ4 202 aa10.53□□□□□ -0.72
SNCA-205ENST00000394991 OR10G4Q8NGN3 311 aa10.53□□□□□ -0.72
SNCA-205ENST00000394991 LOC100131303A0A0U1RQF7 123 aa10.52□□□□□ -0.73
SNCA-205ENST00000394991 IBA57-AS1B1ANH7 110 aa10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms